RNA–Protein interactions for RNA: ENST00000468993.1

SMG5-202, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 345 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-202ENST00000468993 EXOC8Q8IYI6 725 aa6.86□□□□□ -1.31
SMG5-202ENST00000468993 FAM160A2Q8N612 972 aaPredicted RBP6.86□□□□□ -1.31
SMG5-202ENST00000468993 RASGRP4Q8TDF6 673 aa6.86□□□□□ -1.31
SMG5-202ENST00000468993 ZNF526Q8TF50 670 aaPredicted RBP6.86□□□□□ -1.31
SMG5-202ENST00000468993 C2orf49Q9BVC5 232 aaPredicted RBP6.86□□□□□ -1.31
SMG5-202ENST00000468993 C1QTNF2Q9BXJ5 285 aa6.86□□□□□ -1.31
SMG5-202ENST00000468993 IRF2BPLQ9H1B7 796 aa6.86□□□□□ -1.31
SMG5-202ENST00000468993 DNAJC25Q9H1X3 360 aa6.86□□□□□ -1.31
SMG5-202ENST00000468993 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.86□□□□□ -1.31
SMG5-202ENST00000468993 VPS9D1Q9Y2B5 631 aa6.86□□□□□ -1.31
SMG5-202ENST00000468993 FAN1Q9Y2M0 1017 aa6.86□□□□□ -1.31
SMG5-202ENST00000468993 RSF1Q96T23 1441 aaPredicted RBP6.85□□□□□ -1.31
SMG5-202ENST00000468993 NEFLP07196 543 aa6.85□□□□□ -1.31
SMG5-202ENST00000468993 TRMT44Q8IYL2 757 aaKnown RBP6.85□□□□□ -1.31
SMG5-202ENST00000468993 SEC16BQ96JE7 1060 aa6.85□□□□□ -1.31
SMG5-202ENST00000468993 SPSB2Q99619 263 aa6.85□□□□□ -1.31
SMG5-202ENST00000468993 QTRT2Q9H974 415 aaKnown RBP6.85□□□□□ -1.31
SMG5-202ENST00000468993 SIRPGQ9P1W8 387 aa6.85□□□□□ -1.31
SMG5-202ENST00000468993 CCDC194A0A1B0GVG4 234 aa6.84□□□□□ -1.31
SMG5-202ENST00000468993 EIF1AYO14602 144 aaKnown RBP6.84□□□□□ -1.31
SMG5-202ENST00000468993 GIPC1O14908 333 aa6.84□□□□□ -1.31
SMG5-202ENST00000468993 PPP1R12AO14974 1030 aaPredicted RBP6.84□□□□□ -1.31
SMG5-202ENST00000468993 ZBTB39O15060 712 aa6.84□□□□□ -1.31
SMG5-202ENST00000468993 PDGFAP04085 211 aa6.84□□□□□ -1.31
SMG5-202ENST00000468993 SSBP05455 408 aaKnown RBP eCLIP6.84□□□□□ -1.31
SMG5-202ENST00000468993 ST13P50502 369 aaKnown RBP6.84□□□□□ -1.31
SMG5-202ENST00000468993 ATCAYQ86WG3 371 aa6.84□□□□□ -1.31
SMG5-202ENST00000468993 RPUSD2Q8IZ73 545 aaKnown RBP6.84□□□□□ -1.31
SMG5-202ENST00000468993 MORC4Q8TE76 937 aa6.84□□□□□ -1.31
SMG5-202ENST00000468993 RNPC3Q96LT9 517 aaKnown RBP6.84□□□□□ -1.31
SMG5-202ENST00000468993 ESF1Q9H501 851 aaKnown RBP6.84□□□□□ -1.31
SMG5-202ENST00000468993 C12orf49Q9H741 205 aa6.84□□□□□ -1.31
SMG5-202ENST00000468993 PRDM9Q9NQV7 894 aa6.84□□□□□ -1.31
SMG5-202ENST00000468993 DCAF1Q9Y4B6 1507 aa6.83□□□□□ -1.32
SMG5-202ENST00000468993 U2SURPO15042 1029 aaKnown RBP6.83□□□□□ -1.32
SMG5-202ENST00000468993 INHAP05111 366 aa6.83□□□□□ -1.32
SMG5-202ENST00000468993 SCTRP47872 440 aa6.83□□□□□ -1.32
SMG5-202ENST00000468993 APLP1P51693 650 aa6.83□□□□□ -1.32
SMG5-202ENST00000468993 FOXK2Q01167 660 aa6.83□□□□□ -1.32
SMG5-202ENST00000468993 DNM1Q05193 864 aaKnown RBP6.83□□□□□ -1.32
SMG5-202ENST00000468993 TAF1CQ15572 869 aaPredicted RBP6.83□□□□□ -1.32
SMG5-202ENST00000468993 C4orf48Q5BLP8 95 aa6.83□□□□□ -1.32
SMG5-202ENST00000468993 DMRTA1Q5VZB9 504 aa6.83□□□□□ -1.32
SMG5-202ENST00000468993 PTCRAQ6ISU1 281 aaPredicted RBP6.83□□□□□ -1.32
SMG5-202ENST00000468993 ERMP1Q7Z2K6 904 aa6.83□□□□□ -1.32
SMG5-202ENST00000468993 SLC4A9Q96Q91 983 aa6.83□□□□□ -1.32
SMG5-202ENST00000468993 SRPK1Q96SB4 655 aaKnown RBP6.83□□□□□ -1.32
SMG5-202ENST00000468993 SLKQ9H2G2 1235 aaPredicted RBP6.83□□□□□ -1.32
SMG5-202ENST00000468993 DDX56Q9NY93 547 aaKnown RBP6.83□□□□□ -1.32
SMG5-202ENST00000468993 LRFN2Q9ULH4 789 aa6.83□□□□□ -1.32
SMG5-202ENST00000468993 BHMG1C9JSJ3 638 aaPredicted RBP6.82□□□□□ -1.32
SMG5-202ENST00000468993 OPLAHO14841 1288 aa6.82□□□□□ -1.32
SMG5-202ENST00000468993 MAP4K4O95819 1239 aaPredicted RBP6.82□□□□□ -1.32
SMG5-202ENST00000468993 S100BP04271 92 aaPredicted RBP6.82□□□□□ -1.32
SMG5-202ENST00000468993 PCSK2P16519 638 aa6.82□□□□□ -1.32
SMG5-202ENST00000468993 PSMA6P60900 246 aaKnown RBP6.82□□□□□ -1.32
SMG5-202ENST00000468993 ERVK-9P63128 1117 aa6.82□□□□□ -1.32
SMG5-202ENST00000468993 NFX1Q12986 1120 aaKnown RBP6.82□□□□□ -1.32
SMG5-202ENST00000468993 ORC1Q13415 861 aa6.82□□□□□ -1.32
SMG5-202ENST00000468993 LRP10Q7Z4F1 713 aa6.82□□□□□ -1.32
SMG5-202ENST00000468993 ZNF511Q8NB15 262 aa6.82□□□□□ -1.32
SMG5-202ENST00000468993 UBE2Q2Q8WVN8 375 aa6.82□□□□□ -1.32
SMG5-202ENST00000468993 EDEM1Q92611 657 aa6.82□□□□□ -1.32
SMG5-202ENST00000468993 FOXJ1Q92949 421 aa6.82□□□□□ -1.32
SMG5-202ENST00000468993 TRIM52Q96A61 297 aa6.82□□□□□ -1.32
SMG5-202ENST00000468993 NEUROD4Q9HD90 331 aa6.82□□□□□ -1.32
SMG5-202ENST00000468993 SCHIP1Q9P0W5 487 aaPredicted RBP6.82□□□□□ -1.32
SMG5-202ENST00000468993 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.82□□□□□ -1.32
SMG5-202ENST00000468993 SYNJ2O15056 1496 aa6.81□□□□□ -1.32
SMG5-202ENST00000468993 PPP4CP60510 307 aa6.81□□□□□ -1.32
SMG5-202ENST00000468993 FAM26DQ5JW98 314 aa6.81□□□□□ -1.32
SMG5-202ENST00000468993 TICAM2Q86XR7 235 aa6.81□□□□□ -1.32
SMG5-202ENST00000468993 SLC9A9Q8IVB4 645 aa6.81□□□□□ -1.32
SMG5-202ENST00000468993 CCDC24Q8N4L8 307 aa6.81□□□□□ -1.32
SMG5-202ENST00000468993 BAP1Q92560 729 aa6.81□□□□□ -1.32
SMG5-202ENST00000468993 ZNF408Q9H9D4 720 aa6.81□□□□□ -1.32
SMG5-202ENST00000468993 TYW1Q9NV66 732 aaKnown RBP6.81□□□□□ -1.32
SMG5-202ENST00000468993 SERTAD1Q9UHV2 236 aa6.81□□□□□ -1.32
SMG5-202ENST00000468993 CHMP3Q9Y3E7 222 aa6.81□□□□□ -1.32
SMG5-202ENST00000468993 V9GY48 417 aaPredicted RBP6.81□□□□□ -1.32
SMG5-202ENST00000468993 CPNE3O75131 537 aaKnown RBP6.8□□□□□ -1.32
SMG5-202ENST00000468993 ZAP70P43403 619 aa6.8□□□□□ -1.32
SMG5-202ENST00000468993 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.8□□□□□ -1.32
SMG5-202ENST00000468993 POTEHQ6S545 545 aa6.8□□□□□ -1.32
SMG5-202ENST00000468993 POTEAQ6S8J7 498 aa6.8□□□□□ -1.32
SMG5-202ENST00000468993 MRPL50Q8N5N7 158 aaKnown RBP6.8□□□□□ -1.32
SMG5-202ENST00000468993 KCTD15Q96SI1 283 aaPredicted RBP6.8□□□□□ -1.32
SMG5-202ENST00000468993 TRIM55Q9BYV6 548 aa6.8□□□□□ -1.32
SMG5-202ENST00000468993 OSBPL3Q9H4L5 887 aa6.8□□□□□ -1.32
SMG5-202ENST00000468993 SNTG2Q9NY99 539 aa6.8□□□□□ -1.32
SMG5-202ENST00000468993 FAM8A1Q9UBU6 413 aa6.8□□□□□ -1.32
SMG5-202ENST00000468993 STRIP2Q9ULQ0 834 aa6.8□□□□□ -1.32
SMG5-202ENST00000468993 HMGXB3Q12766 1538 aa6.8□□□□□ -1.32
SMG5-202ENST00000468993 ERBB3P21860 1342 aa6.79□□□□□ -1.32
SMG5-202ENST00000468993 SPATA31D1Q6ZQQ2 1576 aa6.79□□□□□ -1.32
SMG5-202ENST00000468993 PEX14O75381 377 aa6.79□□□□□ -1.32
SMG5-202ENST00000468993 CDC45O75419 566 aa6.79□□□□□ -1.32
SMG5-202ENST00000468993 PBX2P40425 430 aa6.79□□□□□ -1.32
SMG5-202ENST00000468993 RAB15P59190 212 aa6.79□□□□□ -1.32
SMG5-202ENST00000468993 MTFR1Q15390 333 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms