RNA–Protein interactions for RNA: ENST00000468993.1

SMG5-202, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 345 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-202ENST00000468993 CHIC1Q5VXU3 224 aa15.05■□□□□ -0
SMG5-202ENST00000468993 AEBP2Q6ZN18 517 aaPredicted RBP14.47□□□□□ -0.09
SMG5-202ENST00000468993 PHF23Q9BUL5 403 aaPredicted RBP13.31□□□□□ -0.28
SMG5-202ENST00000468993 PLPPR3Q6T4P5 718 aa12.63□□□□□ -0.39
SMG5-202ENST00000468993 EHMT2Q96KQ7 1210 aa12.28□□□□□ -0.44
SMG5-202ENST00000468993 SENP3Q9H4L4 574 aaPredicted RBP12.17□□□□□ -0.46
SMG5-202ENST00000468993 KCNA4P22459 653 aa11.99□□□□□ -0.49
SMG5-202ENST00000468993 ADRA2BP18089 450 aa11.74□□□□□ -0.53
SMG5-202ENST00000468993 CSRNP3Q8WYN3 585 aa11.73□□□□□ -0.53
SMG5-202ENST00000468993 SLC24A1O60721 1099 aa11.65□□□□□ -0.54
SMG5-202ENST00000468993 SLC4A1APQ9BWU0 796 aaKnown RBP11.6□□□□□ -0.55
SMG5-202ENST00000468993 PPP6R1Q9UPN7 881 aa11.42□□□□□ -0.58
SMG5-202ENST00000468993 AMER1Q5JTC6 1135 aaPredicted RBP11.26□□□□□ -0.61
SMG5-202ENST00000468993 PPP4R3CPQ6ZMV5 832 aa11.23□□□□□ -0.61
SMG5-202ENST00000468993 NCBP3Q53F19 620 aaKnown RBP11.22□□□□□ -0.61
SMG5-202ENST00000468993 RTN4Q9NQC3 1192 aaKnown RBP11.22□□□□□ -0.61
SMG5-202ENST00000468993 FOXD1Q16676 465 aa11.15□□□□□ -0.62
SMG5-202ENST00000468993 ZBTB22O15209 634 aa11.05□□□□□ -0.64
SMG5-202ENST00000468993 NPM3O75607 178 aaKnown RBP11.04□□□□□ -0.64
SMG5-202ENST00000468993 FOXD4L1Q9NU39 408 aa10.8□□□□□ -0.68
SMG5-202ENST00000468993 PIAS4Q8N2W9 510 aaPredicted RBP10.75□□□□□ -0.69
SMG5-202ENST00000468993 CNKSR2Q8WXI2 1034 aa10.73□□□□□ -0.69
SMG5-202ENST00000468993 DNAJC5BQ9UF47 199 aa10.65□□□□□ -0.7
SMG5-202ENST00000468993 FKBP8Q14318 412 aa10.55□□□□□ -0.72
SMG5-202ENST00000468993 SCAF1Q9H7N4 1312 aaKnown RBP10.54□□□□□ -0.72
SMG5-202ENST00000468993 ATXN8OSP0DMR3 200 aa10.37□□□□□ -0.75
SMG5-202ENST00000468993 PLCB2Q00722 1185 aa10.32□□□□□ -0.76
SMG5-202ENST00000468993 RNF216Q9NWF9 866 aaPredicted RBP10.3□□□□□ -0.76
SMG5-202ENST00000468993 BCANQ96GW7 911 aa10.25□□□□□ -0.77
SMG5-202ENST00000468993 MYCNP04198 464 aaPredicted RBP10.21□□□□□ -0.77
SMG5-202ENST00000468993 SLC4A2P04920 1241 aa10.19□□□□□ -0.78
SMG5-202ENST00000468993 PRKCSHP14314 528 aaPredicted RBP10.17□□□□□ -0.78
SMG5-202ENST00000468993 TAOK2Q9UL54 1235 aa10.15□□□□□ -0.78
SMG5-202ENST00000468993 HAP1P54257 671 aaPredicted RBP10.14□□□□□ -0.79
SMG5-202ENST00000468993 MAPK8IP2Q13387 824 aaPredicted RBP10.12□□□□□ -0.79
SMG5-202ENST00000468993 VSIG10Q8N0Z9 540 aa10.05□□□□□ -0.8
SMG5-202ENST00000468993 HOXD11P31277 338 aaPredicted RBP10.02□□□□□ -0.81
SMG5-202ENST00000468993 FBXO3Q9UK99 471 aa9.97□□□□□ -0.81
SMG5-202ENST00000468993 MSH5O43196 834 aa9.96□□□□□ -0.82
SMG5-202ENST00000468993 TPRNQ4KMQ1 711 aa9.96□□□□□ -0.82
SMG5-202ENST00000468993 DCAF8L2P0C7V8 631 aa9.9□□□□□ -0.82
SMG5-202ENST00000468993 DMRT2Q9Y5R5 561 aa9.86□□□□□ -0.83
SMG5-202ENST00000468993 DAXXQ9UER7 740 aaPredicted RBP9.83□□□□□ -0.84
SMG5-202ENST00000468993 ATF5Q9Y2D1 282 aaPredicted RBP9.81□□□□□ -0.84
SMG5-202ENST00000468993 VASPP50552 380 aaPredicted RBP9.79□□□□□ -0.84
SMG5-202ENST00000468993 KDM2AQ9Y2K7 1162 aa9.79□□□□□ -0.84
SMG5-202ENST00000468993 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.77□□□□□ -0.85
SMG5-202ENST00000468993 ARXQ96QS3 562 aa9.76□□□□□ -0.85
SMG5-202ENST00000468993 PKD2Q13563 968 aa9.74□□□□□ -0.85
SMG5-202ENST00000468993 TIMELESSQ9UNS1 1208 aa9.74□□□□□ -0.85
SMG5-202ENST00000468993 BBXQ8WY36 941 aaPredicted RBP9.73□□□□□ -0.85
SMG5-202ENST00000468993 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.71□□□□□ -0.86
SMG5-202ENST00000468993 FBLN2P98095 1184 aa9.71□□□□□ -0.86
SMG5-202ENST00000468993 HNRNPUL2Q1KMD3 747 aaKnown RBP9.71□□□□□ -0.86
SMG5-202ENST00000468993 SAMD1Q6SPF0 538 aaPredicted RBP9.71□□□□□ -0.86
SMG5-202ENST00000468993 IFNLR1Q8IU57 520 aaPredicted RBP9.7□□□□□ -0.86
SMG5-202ENST00000468993 PROM2Q8N271 834 aa9.69□□□□□ -0.86
SMG5-202ENST00000468993 SPDYE4A6NLX3 237 aa9.68□□□□□ -0.86
SMG5-202ENST00000468993 TULP1O00294 542 aaPredicted RBP9.68□□□□□ -0.86
SMG5-202ENST00000468993 ERICH6Q7L0X2 663 aa9.68□□□□□ -0.86
SMG5-202ENST00000468993 PAXIP1Q6ZW49 1069 aaPredicted RBP9.66□□□□□ -0.86
SMG5-202ENST00000468993 CFAP44Q96MT7 982 aa9.62□□□□□ -0.87
SMG5-202ENST00000468993 GTF3C3Q9Y5Q9 886 aa9.61□□□□□ -0.87
SMG5-202ENST00000468993 NPM1P06748 294 aaKnown RBP eCLIP9.56□□□□□ -0.88
SMG5-202ENST00000468993 ZNF219Q9P2Y4 722 aaPredicted RBP9.56□□□□□ -0.88
SMG5-202ENST00000468993 NBR1Q14596 966 aa9.54□□□□□ -0.88
SMG5-202ENST00000468993 SPRYD3Q8NCJ5 442 aa9.54□□□□□ -0.88
SMG5-202ENST00000468993 TSHZ2Q9NRE2 1034 aa9.53□□□□□ -0.88
SMG5-202ENST00000468993 ECM2O94769 699 aaPredicted RBP9.52□□□□□ -0.89
SMG5-202ENST00000468993 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.52□□□□□ -0.89
SMG5-202ENST00000468993 HOMEZQ8IX15 550 aa9.5□□□□□ -0.89
SMG5-202ENST00000468993 DNAJC5Q9H3Z4 198 aa9.48□□□□□ -0.89
SMG5-202ENST00000468993 U3KPZ7 1027 aaPredicted RBP9.48□□□□□ -0.89
SMG5-202ENST00000468993 SPOCK2Q92563 424 aa9.46□□□□□ -0.9
SMG5-202ENST00000468993 MKRN4PQ13434 485 aaPredicted RBP9.45□□□□□ -0.9
SMG5-202ENST00000468993 TMEM132AQ24JP5 1023 aa9.43□□□□□ -0.9
SMG5-202ENST00000468993 APLP2Q06481 763 aa9.4□□□□□ -0.9
SMG5-202ENST00000468993 RGL2O15211 777 aa9.39□□□□□ -0.91
SMG5-202ENST00000468993 KLHL34Q8N239 644 aa9.38□□□□□ -0.91
SMG5-202ENST00000468993 C14orf37Q86TY3 774 aa9.34□□□□□ -0.91
SMG5-202ENST00000468993 DCAF8L1A6NGE4 600 aa9.33□□□□□ -0.92
SMG5-202ENST00000468993 CHGAP10645 457 aaKnown RBP9.3□□□□□ -0.92
SMG5-202ENST00000468993 HS6ST3Q8IZP7 471 aa9.21□□□□□ -0.94
SMG5-202ENST00000468993 STAG3Q9UJ98 1225 aa9.21□□□□□ -0.94
SMG5-202ENST00000468993 PLCD3Q8N3E9 789 aa9.17□□□□□ -0.94
SMG5-202ENST00000468993 TRIM41Q8WV44 630 aa9.16□□□□□ -0.94
SMG5-202ENST00000468993 RANGAP1P46060 587 aaPredicted RBP9.13□□□□□ -0.95
SMG5-202ENST00000468993 CIZ1Q9ULV3 898 aaPredicted RBP9.13□□□□□ -0.95
SMG5-202ENST00000468993 POLA2Q14181 598 aa9.08□□□□□ -0.96
SMG5-202ENST00000468993 PODXL2Q9NZ53 605 aa9.08□□□□□ -0.96
SMG5-202ENST00000468993 MIER1Q8N108 512 aa9.07□□□□□ -0.96
SMG5-202ENST00000468993 ZBTB12Q9Y330 459 aaPredicted RBP9.07□□□□□ -0.96
SMG5-202ENST00000468993 ZBTB47Q9UFB7 747 aaPredicted RBP9.05□□□□□ -0.96
SMG5-202ENST00000468993 GTPBP6O43824 516 aaPredicted RBP9.04□□□□□ -0.96
SMG5-202ENST00000468993 NKX1-1Q15270 411 aaPredicted RBP9.04□□□□□ -0.96
SMG5-202ENST00000468993 P3H3Q8IVL6 736 aa9.04□□□□□ -0.96
SMG5-202ENST00000468993 SUPT5HO00267 1087 aaKnown RBP9.03□□□□□ -0.96
SMG5-202ENST00000468993 TRHP20396 242 aaPredicted RBP9.01□□□□□ -0.97
SMG5-202ENST00000468993 BRPF1P55201 1214 aaPredicted RBP9.01□□□□□ -0.97
SMG5-202ENST00000468993 PLEKHG5O94827 1062 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms