RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 HIRAP54198 1017 aaPredicted RBP3.55□□□□□ -1.84
NUCKS1-202ENST00000464938 C1orf229Q6ZS94 237 aaPredicted RBP3.55□□□□□ -1.84
NUCKS1-202ENST00000464938 PPARGC1BQ86YN6 1023 aaKnown RBP3.55□□□□□ -1.84
NUCKS1-202ENST00000464938 NEDD1Q8NHV4 660 aa3.55□□□□□ -1.84
NUCKS1-202ENST00000464938 C7orf43Q8WVR3 580 aa3.55□□□□□ -1.84
NUCKS1-202ENST00000464938 C2orf49Q9BVC5 232 aaPredicted RBP3.55□□□□□ -1.84
NUCKS1-202ENST00000464938 TSPAN10Q9H1Z9 355 aaPredicted RBP3.55□□□□□ -1.84
NUCKS1-202ENST00000464938 POLMQ9NP87 494 aaPredicted RBP3.55□□□□□ -1.84
NUCKS1-202ENST00000464938 RAB6BQ9NRW1 208 aa3.55□□□□□ -1.84
NUCKS1-202ENST00000464938 SERTAD1Q9UHV2 236 aa3.55□□□□□ -1.84
NUCKS1-202ENST00000464938 USP3Q9Y6I4 520 aa3.55□□□□□ -1.84
NUCKS1-202ENST00000464938 SPATA31C2B4DYI2 1134 aa3.54□□□□□ -1.84
NUCKS1-202ENST00000464938 FOXO3O43524 673 aa3.54□□□□□ -1.84
NUCKS1-202ENST00000464938 PRMT3O60678 531 aa3.54□□□□□ -1.84
NUCKS1-202ENST00000464938 SCNN1AP37088 669 aa3.54□□□□□ -1.84
NUCKS1-202ENST00000464938 FKBP5Q13451 457 aaPredicted RBP3.54□□□□□ -1.84
NUCKS1-202ENST00000464938 TEAD4Q15561 434 aa3.54□□□□□ -1.84
NUCKS1-202ENST00000464938 ECM1Q16610 540 aa3.54□□□□□ -1.84
NUCKS1-202ENST00000464938 LYSMD3Q7Z3D4 306 aa3.54□□□□□ -1.84
NUCKS1-202ENST00000464938 AEBP1Q8IUX7 1158 aa3.54□□□□□ -1.84
NUCKS1-202ENST00000464938 SLC9A9Q8IVB4 645 aa3.54□□□□□ -1.84
NUCKS1-202ENST00000464938 ZDHHC1Q8WTX9 485 aa3.54□□□□□ -1.84
NUCKS1-202ENST00000464938 SCG3Q8WXD2 468 aaKnown RBP3.54□□□□□ -1.84
NUCKS1-202ENST00000464938 HINFPQ9BQA5 517 aa3.54□□□□□ -1.84
NUCKS1-202ENST00000464938 ZBTB7CA1YPR0 619 aa3.53□□□□□ -1.84
NUCKS1-202ENST00000464938 EML1O00423 815 aa3.53□□□□□ -1.84
NUCKS1-202ENST00000464938 LGR5O75473 907 aa3.53□□□□□ -1.84
NUCKS1-202ENST00000464938 THBS1P07996 1170 aa3.53□□□□□ -1.84
NUCKS1-202ENST00000464938 NPR3P17342 541 aa3.53□□□□□ -1.84
NUCKS1-202ENST00000464938 TLR1Q15399 786 aa3.53□□□□□ -1.84
NUCKS1-202ENST00000464938 FOXD4L6Q3SYB3 417 aaPredicted RBP3.53□□□□□ -1.84
NUCKS1-202ENST00000464938 WDR44Q5JSH3 913 aa3.53□□□□□ -1.84
NUCKS1-202ENST00000464938 FOXD4L3Q6VB84 417 aaPredicted RBP3.53□□□□□ -1.84
NUCKS1-202ENST00000464938 LINC00114Q6XXX2 140 aa3.53□□□□□ -1.84
NUCKS1-202ENST00000464938 CAPN12Q6ZSI9 719 aa3.53□□□□□ -1.84
NUCKS1-202ENST00000464938 EGFL7Q9UHF1 273 aa3.53□□□□□ -1.84
NUCKS1-202ENST00000464938 MEN1O00255 615 aa3.52□□□□□ -1.85
NUCKS1-202ENST00000464938 PTCD1O75127 700 aaKnown RBP3.52□□□□□ -1.85
NUCKS1-202ENST00000464938 NOS2P35228 1153 aa3.52□□□□□ -1.85
NUCKS1-202ENST00000464938 PSMA6P60900 246 aaKnown RBP3.52□□□□□ -1.85
NUCKS1-202ENST00000464938 CD163Q86VB7 1156 aa3.52□□□□□ -1.85
NUCKS1-202ENST00000464938 NBPF15Q8N660 670 aa3.52□□□□□ -1.85
NUCKS1-202ENST00000464938 CCER1Q8TC90 406 aaPredicted RBP3.52□□□□□ -1.85
NUCKS1-202ENST00000464938 MYO19Q96H55 970 aa3.52□□□□□ -1.85
NUCKS1-202ENST00000464938 NLRP3Q96P20 1036 aa3.52□□□□□ -1.85
NUCKS1-202ENST00000464938 ZSCAN10Q96SZ4 725 aaPredicted RBP3.52□□□□□ -1.85
NUCKS1-202ENST00000464938 GZF1Q9H116 711 aaPredicted RBP3.52□□□□□ -1.85
NUCKS1-202ENST00000464938 SUV39H2Q9H5I1 410 aa3.52□□□□□ -1.85
NUCKS1-202ENST00000464938 SEPT3Q9UH03 358 aa3.52□□□□□ -1.85
NUCKS1-202ENST00000464938 MKL2Q9ULH7 1088 aa3.52□□□□□ -1.85
NUCKS1-202ENST00000464938 DYRK1BQ9Y463 629 aa3.52□□□□□ -1.85
NUCKS1-202ENST00000464938 IVNS1ABPQ9Y6Y0 642 aa3.52□□□□□ -1.85
NUCKS1-202ENST00000464938 SOWAHDA6NJG2 315 aa3.51□□□□□ -1.85
NUCKS1-202ENST00000464938 C1QTNF9BB2RNN3 333 aa3.51□□□□□ -1.85
NUCKS1-202ENST00000464938 PPP1R12BO60237 982 aaPredicted RBP3.51□□□□□ -1.85
NUCKS1-202ENST00000464938 ICMTO60725 284 aa3.51□□□□□ -1.85
NUCKS1-202ENST00000464938 RHOQP17081 205 aa3.51□□□□□ -1.85
NUCKS1-202ENST00000464938 CHRNA4P43681 627 aa3.51□□□□□ -1.85
NUCKS1-202ENST00000464938 C4orf17Q53FE4 359 aa3.51□□□□□ -1.85
NUCKS1-202ENST00000464938 TBCELQ5QJ74 424 aa3.51□□□□□ -1.85
NUCKS1-202ENST00000464938 C1orf53Q5VUE5 145 aa3.51□□□□□ -1.85
NUCKS1-202ENST00000464938 SND1Q7KZF4 910 aaKnown RBP eCLIP3.51□□□□□ -1.85
NUCKS1-202ENST00000464938 RHBDD1Q8TEB9 315 aa3.51□□□□□ -1.85
NUCKS1-202ENST00000464938 L3MBTL2Q969R5 705 aa3.51□□□□□ -1.85
NUCKS1-202ENST00000464938 GTPBP3Q969Y2 492 aaKnown RBP3.51□□□□□ -1.85
NUCKS1-202ENST00000464938 OXCT2Q9BYC2 517 aaPredicted RBP3.51□□□□□ -1.85
NUCKS1-202ENST00000464938 NIFKQ9BYG3 293 aaKnown RBP3.51□□□□□ -1.85
NUCKS1-202ENST00000464938 SERTM1A2A2V5 107 aa3.5□□□□□ -1.85
NUCKS1-202ENST00000464938 TNFRSF10BO14763 440 aa3.5□□□□□ -1.85
NUCKS1-202ENST00000464938 MX2P20592 715 aa3.5□□□□□ -1.85
NUCKS1-202ENST00000464938 SERPINB4P48594 390 aa3.5□□□□□ -1.85
NUCKS1-202ENST00000464938 SF3B2Q13435 895 aaKnown RBP3.5□□□□□ -1.85
NUCKS1-202ENST00000464938 UBAP2LQ14157 1087 aaKnown RBP3.5□□□□□ -1.85
NUCKS1-202ENST00000464938 COX20Q5RI15 118 aa3.5□□□□□ -1.85
NUCKS1-202ENST00000464938 SH3PXD2AQ5TCZ1 1133 aa3.5□□□□□ -1.85
NUCKS1-202ENST00000464938 NBPF10Q6P3W6 841 aaKnown RBP3.5□□□□□ -1.85
NUCKS1-202ENST00000464938 PRICKLE2Q7Z3G6 844 aa3.5□□□□□ -1.85
NUCKS1-202ENST00000464938 HELQQ8TDG4 1101 aa3.5□□□□□ -1.85
NUCKS1-202ENST00000464938 GTF3C2Q8WUA4 911 aaPredicted RBP3.5□□□□□ -1.85
NUCKS1-202ENST00000464938 SAP130Q9H0E3 1048 aa3.5□□□□□ -1.85
NUCKS1-202ENST00000464938 QTRT2Q9H974 415 aaKnown RBP3.5□□□□□ -1.85
NUCKS1-202ENST00000464938 UTP3Q9NQZ2 479 aaKnown RBP eCLIP3.5□□□□□ -1.852e-10■■■■□ 20.5
NUCKS1-202ENST00000464938 ZDHHC3Q9NYG2 299 aa3.5□□□□□ -1.85
NUCKS1-202ENST00000464938 LRFN2Q9ULH4 789 aa3.5□□□□□ -1.85
NUCKS1-202ENST00000464938 MTMR7Q9Y216 660 aa3.5□□□□□ -1.85
NUCKS1-202ENST00000464938 TXLNAP40222 546 aa3.49□□□□□ -1.85
NUCKS1-202ENST00000464938 FKBP4Q02790 459 aaKnown RBP eCLIP3.49□□□□□ -1.85
NUCKS1-202ENST00000464938 POU4F2Q12837 409 aa3.49□□□□□ -1.85
NUCKS1-202ENST00000464938 GNASQ5JWF2 1037 aa3.49□□□□□ -1.85
NUCKS1-202ENST00000464938 TMEM214Q6NUQ4 689 aaKnown RBP3.49□□□□□ -1.85
NUCKS1-202ENST00000464938 C16orf46Q6P387 395 aa3.49□□□□□ -1.85
NUCKS1-202ENST00000464938 FOXR1Q6PIV2 292 aa3.49□□□□□ -1.85
NUCKS1-202ENST00000464938 PODXL2Q9NZ53 605 aa3.49□□□□□ -1.85
NUCKS1-202ENST00000464938 CABP1Q9NZU7 370 aa3.49□□□□□ -1.85
NUCKS1-202ENST00000464938 GPC6Q9Y625 555 aaPredicted RBP3.49□□□□□ -1.85
NUCKS1-202ENST00000464938 H7C1W4 665 aa3.48□□□□□ -1.85
NUCKS1-202ENST00000464938 ATP4AP20648 1035 aa3.48□□□□□ -1.85
NUCKS1-202ENST00000464938 MAP2K3P46734 347 aa3.48□□□□□ -1.85
NUCKS1-202ENST00000464938 DGKGP49619 791 aa3.48□□□□□ -1.85
NUCKS1-202ENST00000464938 ARHGAP4P98171 946 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms