RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 SETDB2Q96T68 719 aa16.95■□□□□ 0.3
R3HDM1-213ENST00000463230 ATP10DQ9P241 1426 aa16.95■□□□□ 0.3
R3HDM1-213ENST00000463230 PDIA6Q15084 440 aa16.94■□□□□ 0.3
R3HDM1-213ENST00000463230 GPR162Q16538 588 aa16.94■□□□□ 0.3
R3HDM1-213ENST00000463230 DDX21Q9NR30 783 aaKnown RBP eCLIP16.94■□□□□ 0.3
R3HDM1-213ENST00000463230 EIF2S2P20042 333 aaKnown RBP16.94■□□□□ 0.3
R3HDM1-213ENST00000463230 DUSP27Q5VZP5 1158 aa16.94■□□□□ 0.3
R3HDM1-213ENST00000463230 LRP10Q7Z4F1 713 aa16.94■□□□□ 0.3
R3HDM1-213ENST00000463230 BRCA1P38398 1863 aaKnown RBP16.93■□□□□ 0.3
R3HDM1-213ENST00000463230 NUP98P52948 1817 aa16.93■□□□□ 0.3
R3HDM1-213ENST00000463230 HDGFL1Q5TGJ6 251 aa16.93■□□□□ 0.3
R3HDM1-213ENST00000463230 N4BP2Q86UW6 1770 aaPredicted RBP16.93■□□□□ 0.3
R3HDM1-213ENST00000463230 CHD4Q14839 1912 aa16.92■□□□□ 0.3
R3HDM1-213ENST00000463230 IBTKQ9P2D0 1353 aaPredicted RBP16.92■□□□□ 0.3
R3HDM1-213ENST00000463230 MYL6BP14649 208 aa16.92■□□□□ 0.3
R3HDM1-213ENST00000463230 DBF4Q9UBU7 674 aaPredicted RBP16.92■□□□□ 0.3
R3HDM1-213ENST00000463230 DLEC1Q9Y238 1755 aa16.92■□□□□ 0.3
R3HDM1-213ENST00000463230 BICDL1Q6ZP65 573 aa16.92■□□□□ 0.3
R3HDM1-213ENST00000463230 KRT24Q2M2I5 525 aa16.91■□□□□ 0.3
R3HDM1-213ENST00000463230 HYPKQ9NX55 129 aa16.9■□□□□ 0.3
R3HDM1-213ENST00000463230 DPEP1P16444 411 aa16.9■□□□□ 0.3
R3HDM1-213ENST00000463230 DIEXFQ68CQ4 756 aaKnown RBP16.9■□□□□ 0.3
R3HDM1-213ENST00000463230 GIGYF2Q6Y7W6 1299 aaKnown RBP16.9■□□□□ 0.3
R3HDM1-213ENST00000463230 TTLL7Q6ZT98 887 aa16.9■□□□□ 0.3
R3HDM1-213ENST00000463230 CNBD1Q8NA66 436 aa16.9■□□□□ 0.3
R3HDM1-213ENST00000463230 BRIP1Q9BX63 1249 aa16.9■□□□□ 0.3
R3HDM1-213ENST00000463230 ARFGEF1Q9Y6D6 1849 aa16.89■□□□□ 0.3
R3HDM1-213ENST00000463230 ST5P78524 1137 aa16.89■□□□□ 0.29
R3HDM1-213ENST00000463230 HSP90AB3PQ58FF7 597 aa16.89■□□□□ 0.29
R3HDM1-213ENST00000463230 NIP7Q9Y221 180 aaKnown RBP eCLIP16.89■□□□□ 0.29
R3HDM1-213ENST00000463230 ANKRD31Q8N7Z5 1873 aa16.89■□□□□ 0.29
R3HDM1-213ENST00000463230 ANKRD36CQ5JPF3 1778 aa16.89■□□□□ 0.29
R3HDM1-213ENST00000463230 YBX3P16989 372 aaKnown RBP eCLIP16.89■□□□□ 0.29
R3HDM1-213ENST00000463230 PDE6BP35913 854 aa16.89■□□□□ 0.29
R3HDM1-213ENST00000463230 PRR5LQ6MZQ0 368 aa16.89■□□□□ 0.29
R3HDM1-213ENST00000463230 PELP1Q8IZL8 1130 aaKnown RBP16.89■□□□□ 0.29
R3HDM1-213ENST00000463230 NYXQ9GZU5 481 aa16.89■□□□□ 0.29
R3HDM1-213ENST00000463230 CHPF2Q9P2E5 772 aa16.89■□□□□ 0.29
R3HDM1-213ENST00000463230 A0A0G2JLW4 131 aa16.88■□□□□ 0.29
R3HDM1-213ENST00000463230 HLFQ16534 295 aa16.88■□□□□ 0.29
R3HDM1-213ENST00000463230 PROSER3Q2NL68 480 aa16.88■□□□□ 0.29
R3HDM1-213ENST00000463230 TPTE2Q6XPS3 522 aa16.88■□□□□ 0.29
R3HDM1-213ENST00000463230 NBPF5PQ86XG9 351 aaPredicted RBP16.88■□□□□ 0.29
R3HDM1-213ENST00000463230 PIM2Q9P1W9 311 aa16.88■□□□□ 0.29
R3HDM1-213ENST00000463230 RIC1Q4ADV7 1423 aa16.88■□□□□ 0.29
R3HDM1-213ENST00000463230 CCDC30Q5VVM6 783 aa16.88■□□□□ 0.29
R3HDM1-213ENST00000463230 MYH16Q9H6N6 1097 aa16.88■□□□□ 0.29
R3HDM1-213ENST00000463230 KCNA3P22001 575 aa16.87■□□□□ 0.29
R3HDM1-213ENST00000463230 PARP10Q53GL7 1025 aa16.87■□□□□ 0.29
R3HDM1-213ENST00000463230 C8orf58Q8NAV2 365 aa16.87■□□□□ 0.29
R3HDM1-213ENST00000463230 XAGE3Q8WTP9 111 aa16.87■□□□□ 0.29
R3HDM1-213ENST00000463230 RNF123Q5XPI4 1314 aa16.87■□□□□ 0.29
R3HDM1-213ENST00000463230 ZNF521Q96K83 1311 aa16.87■□□□□ 0.29
R3HDM1-213ENST00000463230 COPS6Q7L5N1 327 aa16.86■□□□□ 0.29
R3HDM1-213ENST00000463230 ZNF34Q8IZ26 560 aa16.86■□□□□ 0.29
R3HDM1-213ENST00000463230 ZBTB3Q9H5J0 574 aa16.86■□□□□ 0.29
R3HDM1-213ENST00000463230 FANCIQ9NVI1 1328 aa16.86■□□□□ 0.29
R3HDM1-213ENST00000463230 H0YIN7 160 aa16.86■□□□□ 0.29
R3HDM1-213ENST00000463230 NPHP1O15259 732 aa16.86■□□□□ 0.29
R3HDM1-213ENST00000463230 NECTIN2Q92692 538 aa16.86■□□□□ 0.29
R3HDM1-213ENST00000463230 TSR2Q969E8 191 aaKnown RBP16.86■□□□□ 0.29
R3HDM1-213ENST00000463230 CACNA1FO60840 1977 aa16.86■□□□□ 0.29
R3HDM1-213ENST00000463230 GOLGA2Q08379 1002 aa16.85■□□□□ 0.29
R3HDM1-213ENST00000463230 PLBD2Q8NHP8 589 aa16.85■□□□□ 0.29
R3HDM1-213ENST00000463230 DALRD3Q5D0E6 543 aaKnown RBP16.85■□□□□ 0.29
R3HDM1-213ENST00000463230 C2CD5Q86YS7 1000 aa16.85■□□□□ 0.29
R3HDM1-213ENST00000463230 ANXA1P04083 346 aa16.84■□□□□ 0.29
R3HDM1-213ENST00000463230 TWISTNBQ3B726 338 aaPredicted RBP16.84■□□□□ 0.29
R3HDM1-213ENST00000463230 PPP1R42Q7Z4L9 355 aa16.84■□□□□ 0.29
R3HDM1-213ENST00000463230 ARFGEF2Q9Y6D5 1785 aa16.84■□□□□ 0.29
R3HDM1-213ENST00000463230 KLRG2A4D1S0 409 aaPredicted RBP16.83■□□□□ 0.28
R3HDM1-213ENST00000463230 CHRNA5P30532 468 aa16.83■□□□□ 0.28
R3HDM1-213ENST00000463230 STYK1Q6J9G0 422 aa16.83■□□□□ 0.28
R3HDM1-213ENST00000463230 BCS1LQ9Y276 419 aa16.83■□□□□ 0.28
R3HDM1-213ENST00000463230 COL11A2P13942 1736 aaPredicted RBP16.83■□□□□ 0.28
R3HDM1-213ENST00000463230 YY1P25490 414 aa16.82■□□□□ 0.28
R3HDM1-213ENST00000463230 TCIRG1Q13488 830 aa16.82■□□□□ 0.28
R3HDM1-213ENST00000463230 ANKRD13DQ6ZTN6 518 aa16.82■□□□□ 0.28
R3HDM1-213ENST00000463230 STK31Q9BXU1 1019 aa16.82■□□□□ 0.28
R3HDM1-213ENST00000463230 SALL2Q9Y467 1007 aaPredicted RBP16.82■□□□□ 0.28
R3HDM1-213ENST00000463230 ELL2O00472 640 aaPredicted RBP16.82■□□□□ 0.28
R3HDM1-213ENST00000463230 AIMP1Q12904 312 aaKnown RBP16.82■□□□□ 0.28
R3HDM1-213ENST00000463230 TSPYL6Q8N831 410 aa16.82■□□□□ 0.28
R3HDM1-213ENST00000463230 UBN2Q6ZU65 1347 aa16.82■□□□□ 0.28
R3HDM1-213ENST00000463230 TTLL6Q8N841 843 aa16.81■□□□□ 0.28
R3HDM1-213ENST00000463230 DDX58O95786 925 aaKnown RBP16.81■□□□□ 0.28
R3HDM1-213ENST00000463230 GTF2E1P29083 439 aaPredicted RBP16.81■□□□□ 0.28
R3HDM1-213ENST00000463230 CNKSR1Q969H4 720 aa16.81■□□□□ 0.28
R3HDM1-213ENST00000463230 SENP3-EIF4A1A0A087X0R7 540 aa16.8■□□□□ 0.28
R3HDM1-213ENST00000463230 NTSR2O95665 410 aa16.8■□□□□ 0.28
R3HDM1-213ENST00000463230 MASTLQ96GX5 879 aa16.8■□□□□ 0.28
R3HDM1-213ENST00000463230 UTP14AQ9BVJ6 771 aaKnown RBP16.8■□□□□ 0.28
R3HDM1-213ENST00000463230 E9PSI1 815 aa16.8■□□□□ 0.28
R3HDM1-213ENST00000463230 SRGNP10124 158 aa16.8■□□□□ 0.28
R3HDM1-213ENST00000463230 GPTP24298 496 aa16.8■□□□□ 0.28
R3HDM1-213ENST00000463230 TRIM28Q13263 835 aaKnown RBP16.8■□□□□ 0.28
R3HDM1-213ENST00000463230 SUSD4Q5VX71 490 aa16.8■□□□□ 0.28
R3HDM1-213ENST00000463230 NPR1P16066 1061 aa16.79■□□□□ 0.28
R3HDM1-213ENST00000463230 MIER1Q8N108 512 aa16.79■□□□□ 0.28
R3HDM1-213ENST00000463230 VAMP4O75379 141 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms