RNA–Protein interactions for RNA: ENST00000462970.5

PSMD4-208, Transcript of proteasome 26S subunit, non-ATPase 4, humanhuman

TSL 5

Gene PSMD4, Length 900 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4-208ENST00000462970 POLRMTO00411 1230 aaKnown RBP12.44□□□□□ -0.42
PSMD4-208ENST00000462970 SERPINB2P05120 415 aa12.44□□□□□ -0.42
PSMD4-208ENST00000462970 TM4SF1P30408 202 aa12.44□□□□□ -0.42
PSMD4-208ENST00000462970 PROSER3Q2NL68 480 aa12.44□□□□□ -0.42
PSMD4-208ENST00000462970 TTLL7Q6ZT98 887 aa12.44□□□□□ -0.42
PSMD4-208ENST00000462970 C8orf58Q8NAV2 365 aa12.44□□□□□ -0.42
PSMD4-208ENST00000462970 ZBTB3Q9H5J0 574 aa12.44□□□□□ -0.42
PSMD4-208ENST00000462970 ERBB4Q15303 1308 aa12.43□□□□□ -0.42
PSMD4-208ENST00000462970 CCDC24Q8N4L8 307 aa12.43□□□□□ -0.42
PSMD4-208ENST00000462970 SETDB2Q96T68 719 aa12.43□□□□□ -0.42
PSMD4-208ENST00000462970 CHPF2Q9P2E5 772 aa12.43□□□□□ -0.42
PSMD4-208ENST00000462970 KIF13BQ9NQT8 1826 aa12.43□□□□□ -0.42
PSMD4-208ENST00000462970 IL16Q14005 1332 aa12.42□□□□□ -0.42
PSMD4-208ENST00000462970 A0A0G2JLW4 131 aa12.42□□□□□ -0.42
PSMD4-208ENST00000462970 TCERG1O14776 1098 aaKnown RBP12.42□□□□□ -0.42
PSMD4-208ENST00000462970 HLFQ16534 295 aa12.42□□□□□ -0.42
PSMD4-208ENST00000462970 WDR63Q8IWG1 891 aa12.42□□□□□ -0.42
PSMD4-208ENST00000462970 XAGE3Q8WTP9 111 aa12.42□□□□□ -0.42
PSMD4-208ENST00000462970 RNF216Q9NWF9 866 aaPredicted RBP12.42□□□□□ -0.42
PSMD4-208ENST00000462970 NIP7Q9Y221 180 aaKnown RBP eCLIP12.42□□□□□ -0.42
PSMD4-208ENST00000462970 C10orf71Q711Q0 1435 aa12.42□□□□□ -0.42
PSMD4-208ENST00000462970 CARMIL3Q8ND23 1372 aa12.42□□□□□ -0.42
PSMD4-208ENST00000462970 MAP3K15Q6ZN16 1313 aa12.41□□□□□ -0.42
PSMD4-208ENST00000462970 FANCIQ9NVI1 1328 aa12.41□□□□□ -0.42
PSMD4-208ENST00000462970 HOXB7P09629 217 aa12.41□□□□□ -0.42
PSMD4-208ENST00000462970 GPTP24298 496 aa12.41□□□□□ -0.42
PSMD4-208ENST00000462970 PDIA6Q15084 440 aa12.41□□□□□ -0.42
PSMD4-208ENST00000462970 NBPF5PQ86XG9 351 aaPredicted RBP12.41□□□□□ -0.42
PSMD4-208ENST00000462970 TSPYL6Q8N831 410 aa12.41□□□□□ -0.42
PSMD4-208ENST00000462970 ZNF784Q8NCA9 323 aaPredicted RBP12.41□□□□□ -0.42
PSMD4-208ENST00000462970 MYH16Q9H6N6 1097 aa12.41□□□□□ -0.42
PSMD4-208ENST00000462970 DDX21Q9NR30 783 aaKnown RBP eCLIP12.41□□□□□ -0.42
PSMD4-208ENST00000462970 DBF4Q9UBU7 674 aaPredicted RBP12.41□□□□□ -0.42
PSMD4-208ENST00000462970 DPEP1P16444 411 aa12.4□□□□□ -0.42
PSMD4-208ENST00000462970 GTF2E1P29083 439 aaPredicted RBP12.4□□□□□ -0.42
PSMD4-208ENST00000462970 GOLGA2Q08379 1002 aa12.4□□□□□ -0.42
PSMD4-208ENST00000462970 COPS6Q7L5N1 327 aa12.4□□□□□ -0.42
PSMD4-208ENST00000462970 CNBD1Q8NA66 436 aa12.4□□□□□ -0.42
PSMD4-208ENST00000462970 ERVV-1B6SEH8 477 aa12.39□□□□□ -0.43
PSMD4-208ENST00000462970 CHRNA5P30532 468 aa12.39□□□□□ -0.43
PSMD4-208ENST00000462970 ST5P78524 1137 aa12.39□□□□□ -0.43
PSMD4-208ENST00000462970 EXOSC9Q06265 439 aaKnown RBP12.39□□□□□ -0.43
PSMD4-208ENST00000462970 TWISTNBQ3B726 338 aaPredicted RBP12.39□□□□□ -0.43
PSMD4-208ENST00000462970 CCDC30Q5VVM6 783 aa12.39□□□□□ -0.43
PSMD4-208ENST00000462970 CLEC4GQ6UXB4 293 aa12.39□□□□□ -0.43
PSMD4-208ENST00000462970 ZNF428Q96B54 188 aa12.39□□□□□ -0.43
PSMD4-208ENST00000462970 HYPKQ9NX55 129 aa12.39□□□□□ -0.43
PSMD4-208ENST00000462970 KIAA1551Q9HCM1 1747 aa12.39□□□□□ -0.43
PSMD4-208ENST00000462970 NRXN2Q9P2S2 1712 aa12.39□□□□□ -0.43
PSMD4-208ENST00000462970 PXDNLA1KZ92 1463 aa12.39□□□□□ -0.43
PSMD4-208ENST00000462970 ANKRD36CQ5JPF3 1778 aa12.38□□□□□ -0.43
PSMD4-208ENST00000462970 ANKRD31Q8N7Z5 1873 aa12.38□□□□□ -0.43
PSMD4-208ENST00000462970 YBX3P16989 372 aaKnown RBP eCLIP12.38□□□□□ -0.435e-11■■□□□ 13.7
PSMD4-208ENST00000462970 TGFB2P61812 414 aa12.38□□□□□ -0.43
PSMD4-208ENST00000462970 PRR5LQ6MZQ0 368 aa12.38□□□□□ -0.43
PSMD4-208ENST00000462970 C2CD5Q86YS7 1000 aa12.38□□□□□ -0.43
PSMD4-208ENST00000462970 STK31Q9BXU1 1019 aa12.38□□□□□ -0.43
PSMD4-208ENST00000462970 SPINK5Q9NQ38 1064 aaPredicted RBP12.38□□□□□ -0.43
PSMD4-208ENST00000462970 BCS1LQ9Y276 419 aa12.38□□□□□ -0.43
PSMD4-208ENST00000462970 CACNA1SQ13698 1873 aa12.38□□□□□ -0.43
PSMD4-208ENST00000462970 CHD4Q14839 1912 aa12.37□□□□□ -0.43
PSMD4-208ENST00000462970 GIGYF2Q6Y7W6 1299 aaKnown RBP12.37□□□□□ -0.43
PSMD4-208ENST00000462970 LRP10Q7Z4F1 713 aa12.37□□□□□ -0.43
PSMD4-208ENST00000462970 CHMP4AQ9BY43 222 aa12.37□□□□□ -0.43
PSMD4-208ENST00000462970 ARFGEF2Q9Y6D5 1785 aa12.36□□□□□ -0.43
PSMD4-208ENST00000462970 H0YIN7 160 aa12.36□□□□□ -0.43
PSMD4-208ENST00000462970 TPTE2Q6XPS3 522 aa12.36□□□□□ -0.43
PSMD4-208ENST00000462970 RIC3Q7Z5B4 369 aa12.36□□□□□ -0.43
PSMD4-208ENST00000462970 PHAXQ9H814 394 aaKnown RBP12.36□□□□□ -0.43
PSMD4-208ENST00000462970 ANKRD13DQ6ZTN6 518 aa12.35□□□□□ -0.43
PSMD4-208ENST00000462970 NUTM1Q86Y26 1132 aa12.35□□□□□ -0.43
PSMD4-208ENST00000462970 PLBD2Q8NHP8 589 aa12.35□□□□□ -0.43
PSMD4-208ENST00000462970 ZNF622Q969S3 477 aaKnown RBP eCLIP12.35□□□□□ -0.434e-8■■□□□ 13.5
PSMD4-208ENST00000462970 PIM2Q9P1W9 311 aa12.35□□□□□ -0.43
PSMD4-208ENST00000462970 CACNA1FO60840 1977 aa12.35□□□□□ -0.43
PSMD4-208ENST00000462970 BRCA1P38398 1863 aaKnown RBP12.35□□□□□ -0.43
PSMD4-208ENST00000462970 ATP10DQ9P241 1426 aa12.35□□□□□ -0.43
PSMD4-208ENST00000462970 COL11A2P13942 1736 aaPredicted RBP12.34□□□□□ -0.43
PSMD4-208ENST00000462970 DLEC1Q9Y238 1755 aa12.34□□□□□ -0.43
PSMD4-208ENST00000462970 ATP5J2-PTCD1G3V325 749 aa12.34□□□□□ -0.43
PSMD4-208ENST00000462970 RGL2O15211 777 aa12.34□□□□□ -0.43
PSMD4-208ENST00000462970 GRIN3BO60391 1043 aa12.34□□□□□ -0.43
PSMD4-208ENST00000462970 PDE6BP35913 854 aa12.34□□□□□ -0.43
PSMD4-208ENST00000462970 HNRNPUQ00839 825 aaKnown RBP eCLIP12.34□□□□□ -0.43
PSMD4-208ENST00000462970 HSP90AB3PQ58FF7 597 aa12.34□□□□□ -0.43
PSMD4-208ENST00000462970 DALRD3Q5D0E6 543 aaKnown RBP12.34□□□□□ -0.43
PSMD4-208ENST00000462970 SUSD4Q5VX71 490 aa12.34□□□□□ -0.43
PSMD4-208ENST00000462970 BRIP1Q9BX63 1249 aa12.34□□□□□ -0.43
PSMD4-208ENST00000462970 NYXQ9GZU5 481 aa12.34□□□□□ -0.43
PSMD4-208ENST00000462970 ZNF219Q9P2Y4 722 aaPredicted RBP12.34□□□□□ -0.43
PSMD4-208ENST00000462970 UBN2Q6ZU65 1347 aa12.34□□□□□ -0.43
PSMD4-208ENST00000462970 ZNF521Q96K83 1311 aa12.34□□□□□ -0.43
PSMD4-208ENST00000462970 E9PSI1 815 aa12.33□□□□□ -0.44
PSMD4-208ENST00000462970 DDX58O95786 925 aaKnown RBP12.33□□□□□ -0.44
PSMD4-208ENST00000462970 SLC4A2P04920 1241 aa12.33□□□□□ -0.44
PSMD4-208ENST00000462970 ERFEQ4G0M1 354 aa12.33□□□□□ -0.44
PSMD4-208ENST00000462970 PARP10Q53GL7 1025 aa12.33□□□□□ -0.44
PSMD4-208ENST00000462970 ARHGAP27Q6ZUM4 889 aa12.33□□□□□ -0.44
PSMD4-208ENST00000462970 PPP1R42Q7Z4L9 355 aa12.33□□□□□ -0.44
PSMD4-208ENST00000462970 ZNF34Q8IZ26 560 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms