RNA–Protein interactions for RNA: ENST00000462668.5

SMC4-203, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 4,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-203ENST00000462668 CYLDQ9NQC7 956 aa4.45□□□□□ -1.7
SMC4-203ENST00000462668 OPLAHO14841 1288 aa4.45□□□□□ -1.7
SMC4-203ENST00000462668 RAB11FIP3O75154 756 aa4.45□□□□□ -1.7
SMC4-203ENST00000462668 ANKK1Q8NFD2 765 aa4.45□□□□□ -1.7
SMC4-203ENST00000462668 TRIM52Q96A61 297 aa4.45□□□□□ -1.7
SMC4-203ENST00000462668 RNPC3Q96LT9 517 aaKnown RBP4.45□□□□□ -1.7
SMC4-203ENST00000462668 TYW1Q9NV66 732 aaKnown RBP4.45□□□□□ -1.7
SMC4-203ENST00000462668 ATP2B2Q01814 1243 aa4.45□□□□□ -1.7
SMC4-203ENST00000462668 RSRP1Q9BUV0 290 aa4.45□□□□□ -1.7
SMC4-203ENST00000462668 NIF3L1Q9GZT8 377 aa4.45□□□□□ -1.7
SMC4-203ENST00000462668 EIF1AYO14602 144 aaKnown RBP4.44□□□□□ -1.7
SMC4-203ENST00000462668 SIAH2O43255 324 aa4.44□□□□□ -1.7
SMC4-203ENST00000462668 TLL1O43897 1013 aa4.44□□□□□ -1.7
SMC4-203ENST00000462668 EIF5BO60841 1220 aaKnown RBP4.44□□□□□ -1.7
SMC4-203ENST00000462668 GARTP22102 1010 aa4.44□□□□□ -1.7
SMC4-203ENST00000462668 NFE2L2Q16236 605 aa4.44□□□□□ -1.7
SMC4-203ENST00000462668 SRCIN1Q9C0H9 1055 aa4.44□□□□□ -1.7
SMC4-203ENST00000462668 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.44□□□□□ -1.7
SMC4-203ENST00000462668 GPC6Q9Y625 555 aaPredicted RBP4.44□□□□□ -1.7
SMC4-203ENST00000462668 MARCH6O60337 910 aa4.44□□□□□ -1.7
SMC4-203ENST00000462668 SKOR1P84550 965 aa4.44□□□□□ -1.7
SMC4-203ENST00000462668 MYT1Q01538 1121 aa4.44□□□□□ -1.7
SMC4-203ENST00000462668 RASA3Q14644 834 aa4.44□□□□□ -1.7
SMC4-203ENST00000462668 USP48Q86UV5 1035 aa4.44□□□□□ -1.7
SMC4-203ENST00000462668 OTUD5Q96G74 571 aa4.44□□□□□ -1.7
SMC4-203ENST00000462668 NOC4LQ9BVI4 516 aaKnown RBP4.44□□□□□ -1.7
SMC4-203ENST00000462668 GGNBP2Q9H3C7 697 aa4.44□□□□□ -1.7
SMC4-203ENST00000462668 GLIS3Q8NEA6 775 aa4.44□□□□□ -1.7
SMC4-203ENST00000462668 NOP58Q9Y2X3 529 aaKnown RBP4.44□□□□□ -1.7
SMC4-203ENST00000462668 STAU1O95793 577 aaKnown RBP4.43□□□□□ -1.7
SMC4-203ENST00000462668 ATCAYQ86WG3 371 aa4.43□□□□□ -1.7
SMC4-203ENST00000462668 SLC52A1Q9NWF4 448 aa4.43□□□□□ -1.7
SMC4-203ENST00000462668 SIRPGQ9P1W8 387 aa4.43□□□□□ -1.7
SMC4-203ENST00000462668 NEFLP07196 543 aa4.43□□□□□ -1.7
SMC4-203ENST00000462668 MAPK8P45983 427 aa4.43□□□□□ -1.7
SMC4-203ENST00000462668 HS2ST1Q7LGA3 356 aa4.43□□□□□ -1.7
SMC4-203ENST00000462668 EIF4BP23588 611 aaKnown RBP4.43□□□□□ -1.7
SMC4-203ENST00000462668 TAF1CQ15572 869 aaPredicted RBP4.43□□□□□ -1.7
SMC4-203ENST00000462668 MICAL1Q8TDZ2 1067 aa4.43□□□□□ -1.7
SMC4-203ENST00000462668 GPRASP2Q96D09 838 aa4.43□□□□□ -1.7
SMC4-203ENST00000462668 INPP5FQ9Y2H2 1132 aa4.43□□□□□ -1.7
SMC4-203ENST00000462668 ERBB3P21860 1342 aa4.43□□□□□ -1.7
SMC4-203ENST00000462668 ESCO1Q5FWF5 840 aa4.42□□□□□ -1.7
SMC4-203ENST00000462668 CYP2U1Q7Z449 544 aa4.42□□□□□ -1.7
SMC4-203ENST00000462668 STAG1Q8WVM7 1258 aa4.42□□□□□ -1.7
SMC4-203ENST00000462668 SLC6A16Q9GZN6 736 aa4.42□□□□□ -1.7
SMC4-203ENST00000462668 SPG7Q9UQ90 795 aa4.42□□□□□ -1.7
SMC4-203ENST00000462668 GTF2F1P35269 517 aaKnown RBP eCLIP4.42□□□□□ -1.7
SMC4-203ENST00000462668 IER5Q5VY09 327 aa4.42□□□□□ -1.7
SMC4-203ENST00000462668 WBP1LQ9NX94 342 aa4.42□□□□□ -1.7
SMC4-203ENST00000462668 FAM8A1Q9UBU6 413 aa4.42□□□□□ -1.7
SMC4-203ENST00000462668 PRKAB1Q9Y478 270 aa4.42□□□□□ -1.7
SMC4-203ENST00000462668 GREM1O60565 184 aa4.42□□□□□ -1.7
SMC4-203ENST00000462668 ADD1P35611 737 aaKnown RBP4.42□□□□□ -1.7
SMC4-203ENST00000462668 PAK2Q13177 524 aa4.42□□□□□ -1.7
SMC4-203ENST00000462668 CARD14Q9BXL6 1004 aa4.42□□□□□ -1.7
SMC4-203ENST00000462668 RPLP1P05386 114 aaKnown RBP4.41□□□□□ -1.7
SMC4-203ENST00000462668 ORC1Q13415 861 aa4.41□□□□□ -1.7
SMC4-203ENST00000462668 COL9A2Q14055 689 aaPredicted RBP4.41□□□□□ -1.7
SMC4-203ENST00000462668 KIAA0907Q7Z7F0 614 aaPredicted RBP4.41□□□□□ -1.7
SMC4-203ENST00000462668 EDEM1Q92611 657 aa4.41□□□□□ -1.7
SMC4-203ENST00000462668 RHOVQ96L33 236 aa4.41□□□□□ -1.7
SMC4-203ENST00000462668 STRIP2Q9ULQ0 834 aa4.41□□□□□ -1.7
SMC4-203ENST00000462668 NOS2P35228 1153 aa4.41□□□□□ -1.7
SMC4-203ENST00000462668 C3orf58Q8NDZ4 430 aa4.41□□□□□ -1.7
SMC4-203ENST00000462668 CCDC113Q9H0I3 377 aa4.41□□□□□ -1.7
SMC4-203ENST00000462668 TTBK1Q5TCY1 1321 aaPredicted RBP4.41□□□□□ -1.7
SMC4-203ENST00000462668 RNF40O75150 1001 aa4.41□□□□□ -1.7
SMC4-203ENST00000462668 VIL1P09327 827 aaKnown RBP4.41□□□□□ -1.7
SMC4-203ENST00000462668 PRPF40BQ6NWY9 871 aaKnown RBP4.41□□□□□ -1.7
SMC4-203ENST00000462668 ZNF784Q8NCA9 323 aaPredicted RBP4.41□□□□□ -1.7
SMC4-203ENST00000462668 ZFYVE28Q9HCC9 887 aa4.41□□□□□ -1.7
SMC4-203ENST00000462668 C11orf16Q9NQ32 467 aa4.41□□□□□ -1.7
SMC4-203ENST00000462668 ZAP70P43403 619 aa4.41□□□□□ -1.7
SMC4-203ENST00000462668 DHX9Q08211 1270 aaKnown RBP4.41□□□□□ -1.7
SMC4-203ENST00000462668 CTC1Q2NKJ3 1217 aa4.41□□□□□ -1.7
SMC4-203ENST00000462668 THSD4Q6ZMP0 1018 aa4.41□□□□□ -1.7
SMC4-203ENST00000462668 Q6ZVU0 165 aa4.41□□□□□ -1.7
SMC4-203ENST00000462668 CHRDQ9H2X0 955 aa4.41□□□□□ -1.7
SMC4-203ENST00000462668 PCDH12Q9NPG4 1184 aa4.41□□□□□ -1.7
SMC4-203ENST00000462668 MAGEB6P1A0A0J9YX57 407 aa4.4□□□□□ -1.7
SMC4-203ENST00000462668 PPP1R12BO60237 982 aaPredicted RBP4.4□□□□□ -1.7
SMC4-203ENST00000462668 CPNE3O75131 537 aaKnown RBP4.4□□□□□ -1.7
SMC4-203ENST00000462668 EGFRP00533 1210 aa4.4□□□□□ -1.7
SMC4-203ENST00000462668 RPIAP49247 311 aa4.4□□□□□ -1.7
SMC4-203ENST00000462668 PPARGC1BQ86YN6 1023 aaKnown RBP4.4□□□□□ -1.7
SMC4-203ENST00000462668 GALNT12Q8IXK2 581 aa4.4□□□□□ -1.7
SMC4-203ENST00000462668 MTRQ99707 1265 aa4.4□□□□□ -1.7
SMC4-203ENST00000462668 ESYT1Q9BSJ8 1104 aa4.4□□□□□ -1.7
SMC4-203ENST00000462668 NT5C1AQ9BXI3 368 aa4.4□□□□□ -1.7
SMC4-203ENST00000462668 ZSWIM4Q9H7M6 989 aa4.4□□□□□ -1.7
SMC4-203ENST00000462668 MRPL42Q9Y6G3 142 aaKnown RBP4.4□□□□□ -1.7
SMC4-203ENST00000462668 ST18O60284 1047 aa4.4□□□□□ -1.71
SMC4-203ENST00000462668 PLEKHG6Q3KR16 790 aa4.4□□□□□ -1.71
SMC4-203ENST00000462668 KIAA0319Q5VV43 1072 aa4.4□□□□□ -1.71
SMC4-203ENST00000462668 SLC39A13Q96H72 371 aa4.4□□□□□ -1.71
SMC4-203ENST00000462668 PPME1Q9Y570 386 aa4.4□□□□□ -1.71
SMC4-203ENST00000462668 PCDHGB7Q9Y5F8 929 aa4.4□□□□□ -1.71
SMC4-203ENST00000462668 V9GY48 417 aaPredicted RBP4.4□□□□□ -1.71
SMC4-203ENST00000462668 PARNO95453 639 aaKnown RBP4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms