RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 KIF6Q6ZMV9 814 aa24.24■■□□□ 1.47
CCDC188-202ENST00000444532 BCS1LQ9Y276 419 aa24.24■■□□□ 1.47
CCDC188-202ENST00000444532 PDIA6Q15084 440 aa24.23■■□□□ 1.47
CCDC188-202ENST00000444532 KRT24Q2M2I5 525 aa24.23■■□□□ 1.47
CCDC188-202ENST00000444532 MAP3K15Q6ZN16 1313 aa24.23■■□□□ 1.47
CCDC188-202ENST00000444532 UTRNP46939 3433 aa24.23■■□□□ 1.47
CCDC188-202ENST00000444532 NUP98P52948 1817 aa24.22■■□□□ 1.47
CCDC188-202ENST00000444532 CHRNA5P30532 468 aa24.22■■□□□ 1.47
CCDC188-202ENST00000444532 HLFQ16534 295 aa24.22■■□□□ 1.47
CCDC188-202ENST00000444532 PRR5LQ6MZQ0 368 aa24.22■■□□□ 1.47
CCDC188-202ENST00000444532 CNBD1Q8NA66 436 aa24.22■■□□□ 1.47
CCDC188-202ENST00000444532 BRIP1Q9BX63 1249 aa24.22■■□□□ 1.47
CCDC188-202ENST00000444532 TTLL7Q6ZT98 887 aa24.21■■□□□ 1.47
CCDC188-202ENST00000444532 LRP10Q7Z4F1 713 aa24.21■■□□□ 1.47
CCDC188-202ENST00000444532 PDZRN3Q9UPQ7 1066 aa24.21■■□□□ 1.47
CCDC188-202ENST00000444532 NIP7Q9Y221 180 aaKnown RBP eCLIP24.21■■□□□ 1.47
CCDC188-202ENST00000444532 ARFGEF1Q9Y6D6 1849 aa24.2■■□□□ 1.46
CCDC188-202ENST00000444532 NPHP1O15259 732 aa24.2■■□□□ 1.46
CCDC188-202ENST00000444532 PDE6BP35913 854 aa24.2■■□□□ 1.46
CCDC188-202ENST00000444532 DALRD3Q5D0E6 543 aaKnown RBP24.2■■□□□ 1.46
CCDC188-202ENST00000444532 WWC1Q8IX03 1113 aa24.2■■□□□ 1.46
CCDC188-202ENST00000444532 DDX21Q9NR30 783 aaKnown RBP eCLIP24.2■■□□□ 1.46
CCDC188-202ENST00000444532 H0YIN7 160 aa24.19■■□□□ 1.46
CCDC188-202ENST00000444532 ST5P78524 1137 aa24.19■■□□□ 1.46
CCDC188-202ENST00000444532 DUSP27Q5VZP5 1158 aa24.19■■□□□ 1.46
CCDC188-202ENST00000444532 NBPF5PQ86XG9 351 aaPredicted RBP24.19■■□□□ 1.46
CCDC188-202ENST00000444532 NECTIN2Q92692 538 aa24.19■■□□□ 1.46
CCDC188-202ENST00000444532 ANKRD31Q8N7Z5 1873 aa24.19■■□□□ 1.46
CCDC188-202ENST00000444532 DLEC1Q9Y238 1755 aa24.19■■□□□ 1.46
CCDC188-202ENST00000444532 PROSER3Q2NL68 480 aa24.18■■□□□ 1.46
CCDC188-202ENST00000444532 HDGFL1Q5TGJ6 251 aa24.18■■□□□ 1.46
CCDC188-202ENST00000444532 TPTE2Q6XPS3 522 aa24.18■■□□□ 1.46
CCDC188-202ENST00000444532 C2CD5Q86YS7 1000 aa24.18■■□□□ 1.46
CCDC188-202ENST00000444532 FAM9BQ8IZU0 186 aa24.18■■□□□ 1.46
CCDC188-202ENST00000444532 GIGYF2Q6Y7W6 1299 aaKnown RBP24.17■■□□□ 1.46
CCDC188-202ENST00000444532 ZBTB3Q9H5J0 574 aa24.17■■□□□ 1.46
CCDC188-202ENST00000444532 ATP10DQ9P241 1426 aa24.17■■□□□ 1.46
CCDC188-202ENST00000444532 ANXA1P04083 346 aa24.16■■□□□ 1.46
CCDC188-202ENST00000444532 DBF4Q9UBU7 674 aaPredicted RBP24.16■■□□□ 1.46
CCDC188-202ENST00000444532 IL16Q14005 1332 aa24.15■■□□□ 1.46
CCDC188-202ENST00000444532 SENP3-EIF4A1A0A087X0R7 540 aa24.15■■□□□ 1.46
CCDC188-202ENST00000444532 COPS6Q7L5N1 327 aa24.15■■□□□ 1.46
CCDC188-202ENST00000444532 CCDC24Q8N4L8 307 aa24.15■■□□□ 1.46
CCDC188-202ENST00000444532 CHPF2Q9P2E5 772 aa24.15■■□□□ 1.46
CCDC188-202ENST00000444532 TTLL6Q8N841 843 aa24.14■■□□□ 1.45
CCDC188-202ENST00000444532 CHMP4AQ9BY43 222 aa24.14■■□□□ 1.45
CCDC188-202ENST00000444532 NYXQ9GZU5 481 aa24.14■■□□□ 1.45
CCDC188-202ENST00000444532 ARHGAP27Q6ZUM4 889 aa24.13■■□□□ 1.45
CCDC188-202ENST00000444532 ZNF34Q8IZ26 560 aa24.13■■□□□ 1.45
CCDC188-202ENST00000444532 ZNF784Q8NCA9 323 aaPredicted RBP24.13■■□□□ 1.45
CCDC188-202ENST00000444532 XAGE3Q8WTP9 111 aa24.13■■□□□ 1.45
CCDC188-202ENST00000444532 AIMP1Q12904 312 aaKnown RBP24.12■■□□□ 1.45
CCDC188-202ENST00000444532 WDR63Q8IWG1 891 aa24.12■■□□□ 1.45
CCDC188-202ENST00000444532 HYPKQ9NX55 129 aa24.12■■□□□ 1.45
CCDC188-202ENST00000444532 FAM177BA6PVY3 158 aa24.11■■□□□ 1.45
CCDC188-202ENST00000444532 GTF2E1P29083 439 aaPredicted RBP24.11■■□□□ 1.45
CCDC188-202ENST00000444532 C8orf58Q8NAV2 365 aa24.11■■□□□ 1.45
CCDC188-202ENST00000444532 ELL2O00472 640 aaPredicted RBP24.1■■□□□ 1.45
CCDC188-202ENST00000444532 ZNF622Q969S3 477 aaKnown RBP eCLIP24.1■■□□□ 1.45
CCDC188-202ENST00000444532 IBTKQ9P2D0 1353 aaPredicted RBP24.1■■□□□ 1.45
CCDC188-202ENST00000444532 COL11A2P13942 1736 aaPredicted RBP24.1■■□□□ 1.45
CCDC188-202ENST00000444532 KLRG2A4D1S0 409 aaPredicted RBP24.09■■□□□ 1.45
CCDC188-202ENST00000444532 SRGNP10124 158 aa24.09■■□□□ 1.45
CCDC188-202ENST00000444532 GPTP24298 496 aa24.09■■□□□ 1.45
CCDC188-202ENST00000444532 PARP10Q53GL7 1025 aa24.09■■□□□ 1.45
CCDC188-202ENST00000444532 HSP90AB3PQ58FF7 597 aa24.09■■□□□ 1.45
CCDC188-202ENST00000444532 STYK1Q6J9G0 422 aa24.09■■□□□ 1.45
CCDC188-202ENST00000444532 TSR2Q969E8 191 aaKnown RBP24.09■■□□□ 1.45
CCDC188-202ENST00000444532 SALL2Q9Y467 1007 aaPredicted RBP24.09■■□□□ 1.45
CCDC188-202ENST00000444532 UBN2Q6ZU65 1347 aa24.09■■□□□ 1.45
CCDC188-202ENST00000444532 PPP1R42Q7Z4L9 355 aa24.08■■□□□ 1.45
CCDC188-202ENST00000444532 MASTLQ96GX5 879 aa24.08■■□□□ 1.45
CCDC188-202ENST00000444532 ANKRD36CQ5JPF3 1778 aa24.07■■□□□ 1.44
CCDC188-202ENST00000444532 CCDC30Q5VVM6 783 aa24.07■■□□□ 1.44
CCDC188-202ENST00000444532 SUSD4Q5VX71 490 aa24.07■■□□□ 1.44
CCDC188-202ENST00000444532 ANKRD13DQ6ZTN6 518 aa24.07■■□□□ 1.44
CCDC188-202ENST00000444532 CNKSR1Q969H4 720 aa24.07■■□□□ 1.44
CCDC188-202ENST00000444532 PLBD2Q8NHP8 589 aa24.06■■□□□ 1.44
CCDC188-202ENST00000444532 CCER2I3L3R5 266 aa24.05■■□□□ 1.44
CCDC188-202ENST00000444532 NPR1P16066 1061 aa24.05■■□□□ 1.44
CCDC188-202ENST00000444532 TCIRG1Q13488 830 aa24.05■■□□□ 1.44
CCDC188-202ENST00000444532 TSPYL6Q8N831 410 aa24.05■■□□□ 1.44
CCDC188-202ENST00000444532 ADCY9O60503 1353 aa24.04■■□□□ 1.44
CCDC188-202ENST00000444532 NTSR2O95665 410 aa24.04■■□□□ 1.44
CCDC188-202ENST00000444532 ERFEQ4G0M1 354 aa24.04■■□□□ 1.44
CCDC188-202ENST00000444532 NUTM1Q86Y26 1132 aa24.04■■□□□ 1.44
CCDC188-202ENST00000444532 RIC1Q4ADV7 1423 aa24.03■■□□□ 1.44
CCDC188-202ENST00000444532 UTP14AQ9BVJ6 771 aaKnown RBP24.03■■□□□ 1.44
CCDC188-202ENST00000444532 ARFGEF2Q9Y6D5 1785 aa24.03■■□□□ 1.44
CCDC188-202ENST00000444532 TWISTNBQ3B726 338 aaPredicted RBP24.02■■□□□ 1.44
CCDC188-202ENST00000444532 RNF123Q5XPI4 1314 aa24.02■■□□□ 1.44
CCDC188-202ENST00000444532 SBF1O95248 1867 aa24.01■■□□□ 1.43
CCDC188-202ENST00000444532 NLRP10Q86W26 655 aa24.01■■□□□ 1.43
CCDC188-202ENST00000444532 FANCIQ9NVI1 1328 aa24.01■■□□□ 1.43
CCDC188-202ENST00000444532 ABCC12Q96J65 1359 aa24.01■■□□□ 1.43
CCDC188-202ENST00000444532 SLX4Q8IY92 1834 aa24■■□□□ 1.43
CCDC188-202ENST00000444532 CACNA1SQ13698 1873 aa24■■□□□ 1.43
CCDC188-202ENST00000444532 ALDH1B1P30837 517 aa24■■□□□ 1.43
CCDC188-202ENST00000444532 CRY2Q49AN0 593 aa24■■□□□ 1.43
CCDC188-202ENST00000444532 PRPF40BQ6NWY9 871 aaKnown RBP24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms