RNA–Protein interactions for RNA: ENST00000439068.6

LSMEM1-202, Transcript of leucine rich single-pass membrane protein 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene LSMEM1, Length 730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1-202ENST00000439068 KMT5BQ4FZB7 885 aa12.55□□□□□ -0.4
LSMEM1-202ENST00000439068 USP19O94966 1318 aa12.55□□□□□ -0.4
LSMEM1-202ENST00000439068 GRIPAP1Q4V328 841 aa12.54□□□□□ -0.4
LSMEM1-202ENST00000439068 TSC1Q92574 1164 aa12.54□□□□□ -0.4
LSMEM1-202ENST00000439068 CAMTA1Q9Y6Y1 1673 aa12.54□□□□□ -0.4
LSMEM1-202ENST00000439068 ITSN1Q15811 1721 aa12.54□□□□□ -0.4
LSMEM1-202ENST00000439068 OVOS2A0A0G2JMS6 1433 aa12.54□□□□□ -0.4
LSMEM1-202ENST00000439068 OVOS2A0A0J9YW53 1432 aa12.54□□□□□ -0.4
LSMEM1-202ENST00000439068 CRB1P82279 1406 aa12.54□□□□□ -0.4
LSMEM1-202ENST00000439068 OVOS2Q6IE36 1432 aa12.54□□□□□ -0.4
LSMEM1-202ENST00000439068 MORN1Q5T089 497 aa12.53□□□□□ -0.4
LSMEM1-202ENST00000439068 ANKK1Q8NFD2 765 aa12.53□□□□□ -0.4
LSMEM1-202ENST00000439068 STK32BQ9NY57 414 aa12.53□□□□□ -0.4
LSMEM1-202ENST00000439068 SLC27A5Q9Y2P5 690 aa12.53□□□□□ -0.4
LSMEM1-202ENST00000439068 AATKQ6ZMQ8 1374 aa12.53□□□□□ -0.4
LSMEM1-202ENST00000439068 EXOC5O00471 708 aa12.52□□□□□ -0.41
LSMEM1-202ENST00000439068 ACTN4O43707 911 aaKnown RBP12.52□□□□□ -0.41
LSMEM1-202ENST00000439068 CSB-PGBD3P0DP91 1061 aa12.52□□□□□ -0.41
LSMEM1-202ENST00000439068 KCNH5Q8NCM2 988 aa12.52□□□□□ -0.41
LSMEM1-202ENST00000439068 CABP1Q9NZU7 370 aa12.52□□□□□ -0.41
LSMEM1-202ENST00000439068 HPS5Q9UPZ3 1129 aa12.52□□□□□ -0.41
LSMEM1-202ENST00000439068 SOWAHBA6NEL2 793 aa12.51□□□□□ -0.41
LSMEM1-202ENST00000439068 ZBTB7AO95365 584 aa12.51□□□□□ -0.41
LSMEM1-202ENST00000439068 HMX1Q9NP08 348 aaPredicted RBP12.51□□□□□ -0.41
LSMEM1-202ENST00000439068 CENPJQ9HC77 1338 aaPredicted RBP12.51□□□□□ -0.41
LSMEM1-202ENST00000439068 PPIP5K1Q6PFW1 1433 aa12.51□□□□□ -0.41
LSMEM1-202ENST00000439068 APLP1P51693 650 aa12.5□□□□□ -0.41
LSMEM1-202ENST00000439068 PPP4CP60510 307 aa12.5□□□□□ -0.41
LSMEM1-202ENST00000439068 LRRN4Q8WUT4 740 aa12.5□□□□□ -0.41
LSMEM1-202ENST00000439068 TBC1D2BQ9UPU7 963 aa12.5□□□□□ -0.41
LSMEM1-202ENST00000439068 CRYBG1Q9Y4K1 1723 aa12.5□□□□□ -0.41
LSMEM1-202ENST00000439068 PHRF1Q9P1Y6 1649 aaKnown RBP12.49□□□□□ -0.41
LSMEM1-202ENST00000439068 COL5A2P05997 1499 aaPredicted RBP12.49□□□□□ -0.41
LSMEM1-202ENST00000439068 WDR17Q8IZU2 1322 aa12.49□□□□□ -0.41
LSMEM1-202ENST00000439068 WNT2BQ93097 391 aa12.49□□□□□ -0.41
LSMEM1-202ENST00000439068 KRTAP3-3Q9BYR6 98 aa12.49□□□□□ -0.41
LSMEM1-202ENST00000439068 KRTAP3-2Q9BYR7 98 aa12.49□□□□□ -0.41
LSMEM1-202ENST00000439068 ABL2P42684 1182 aa12.48□□□□□ -0.41
LSMEM1-202ENST00000439068 SLC15A2Q16348 729 aa12.48□□□□□ -0.41
LSMEM1-202ENST00000439068 TXNRD1Q16881 649 aa12.48□□□□□ -0.41
LSMEM1-202ENST00000439068 NBPF1Q3BBV0 1214 aa12.48□□□□□ -0.41
LSMEM1-202ENST00000439068 HOMEZQ8IX15 550 aa12.48□□□□□ -0.41
LSMEM1-202ENST00000439068 MARCH10Q8NA82 808 aaPredicted RBP12.48□□□□□ -0.41
LSMEM1-202ENST00000439068 PRR7Q8TB68 274 aa12.48□□□□□ -0.41
LSMEM1-202ENST00000439068 CARD10Q9BWT7 1032 aa12.48□□□□□ -0.41
LSMEM1-202ENST00000439068 EVC2Q86UK5 1308 aa12.47□□□□□ -0.41
LSMEM1-202ENST00000439068 ZNF784Q8NCA9 323 aaPredicted RBP12.47□□□□□ -0.41
LSMEM1-202ENST00000439068 SYT17Q9BSW7 474 aa12.47□□□□□ -0.41
LSMEM1-202ENST00000439068 MTFR1LQ9H019 292 aa12.47□□□□□ -0.41
LSMEM1-202ENST00000439068 RREB1Q92766 1687 aa12.47□□□□□ -0.41
LSMEM1-202ENST00000439068 NUP188Q5SRE5 1749 aa12.46□□□□□ -0.41
LSMEM1-202ENST00000439068 BLOC1S3Q6QNY0 202 aa12.46□□□□□ -0.41
LSMEM1-202ENST00000439068 ARHGEF25Q86VW2 580 aa12.46□□□□□ -0.41
LSMEM1-202ENST00000439068 TSR3Q9UJK0 312 aaKnown RBP12.46□□□□□ -0.41
LSMEM1-202ENST00000439068 BCL9O00512 1426 aa12.45□□□□□ -0.42
LSMEM1-202ENST00000439068 NRKQ7Z2Y5 1582 aa12.45□□□□□ -0.42
LSMEM1-202ENST00000439068 RNF19BQ6ZMZ0 732 aa12.45□□□□□ -0.42
LSMEM1-202ENST00000439068 CCDC82Q8N4S0 544 aa12.45□□□□□ -0.42
LSMEM1-202ENST00000439068 HELBQ8NG08 1087 aaPredicted RBP12.45□□□□□ -0.42
LSMEM1-202ENST00000439068 TRIM34Q9BYJ4 488 aa12.45□□□□□ -0.42
LSMEM1-202ENST00000439068 FHDC1Q9C0D6 1143 aaPredicted RBP12.45□□□□□ -0.42
LSMEM1-202ENST00000439068 ZNF330Q9Y3S2 320 aaPredicted RBP12.45□□□□□ -0.42
LSMEM1-202ENST00000439068 ARHGEF28Q8N1W1 1705 aaKnown RBP12.45□□□□□ -0.42
LSMEM1-202ENST00000439068 USP6P35125 1406 aa12.45□□□□□ -0.42
LSMEM1-202ENST00000439068 PER1O15534 1290 aaPredicted RBP12.44□□□□□ -0.42
LSMEM1-202ENST00000439068 PTF1AQ7RTS3 328 aa12.44□□□□□ -0.42
LSMEM1-202ENST00000439068 EPS8L1Q8TE68 723 aa12.44□□□□□ -0.42
LSMEM1-202ENST00000439068 PDGFDQ9GZP0 370 aaPredicted RBP12.44□□□□□ -0.42
LSMEM1-202ENST00000439068 WBP1LQ9NX94 342 aa12.44□□□□□ -0.42
LSMEM1-202ENST00000439068 PARP4Q9UKK3 1724 aaKnown RBP12.44□□□□□ -0.42
LSMEM1-202ENST00000439068 LMO7Q8WWI1 1683 aa12.44□□□□□ -0.42
LSMEM1-202ENST00000439068 TTC21AQ8NDW8 1320 aa12.43□□□□□ -0.42
LSMEM1-202ENST00000439068 NECTIN2Q92692 538 aa12.43□□□□□ -0.42
LSMEM1-202ENST00000439068 CCDC7Q96M83 1385 aa12.43□□□□□ -0.42
LSMEM1-202ENST00000439068 TTC21BQ7Z4L5 1316 aa12.42□□□□□ -0.42
LSMEM1-202ENST00000439068 GPR162Q16538 588 aa12.42□□□□□ -0.42
LSMEM1-202ENST00000439068 RETREG3Q86VR2 466 aa12.42□□□□□ -0.42
LSMEM1-202ENST00000439068 SCUBE3Q8IX30 993 aa12.42□□□□□ -0.42
LSMEM1-202ENST00000439068 SENP3-EIF4A1A0A087X0R7 540 aa12.41□□□□□ -0.42
LSMEM1-202ENST00000439068 PRR14Q9BWN1 585 aa12.41□□□□□ -0.42
LSMEM1-202ENST00000439068 NLRP2Q9NX02 1062 aa12.41□□□□□ -0.42
LSMEM1-202ENST00000439068 PCDHB3Q9Y5E6 796 aa12.41□□□□□ -0.42
LSMEM1-202ENST00000439068 TOPAZ1Q8N9V7 1692 aa12.41□□□□□ -0.42
LSMEM1-202ENST00000439068 POM121CA8CG34 1229 aa12.4□□□□□ -0.42
LSMEM1-202ENST00000439068 POLD1P28340 1107 aa12.4□□□□□ -0.42
LSMEM1-202ENST00000439068 C1QTNF8P60827 252 aa12.4□□□□□ -0.42
LSMEM1-202ENST00000439068 Q3C1V9 767 aa12.4□□□□□ -0.42
LSMEM1-202ENST00000439068 BRICD5Q6PL45 260 aa12.4□□□□□ -0.42
LSMEM1-202ENST00000439068 ACSBG1Q96GR2 724 aa12.4□□□□□ -0.42
LSMEM1-202ENST00000439068 CPSF1Q10570 1443 aaKnown RBP12.39□□□□□ -0.43
LSMEM1-202ENST00000439068 RGPD3A6NKT7 1758 aaPredicted RBP12.39□□□□□ -0.43
LSMEM1-202ENST00000439068 RGPD4Q7Z3J3 1758 aa12.39□□□□□ -0.43
LSMEM1-202ENST00000439068 GPR37L1O60883 481 aa12.39□□□□□ -0.43
LSMEM1-202ENST00000439068 IL2RBP14784 551 aa12.39□□□□□ -0.43
LSMEM1-202ENST00000439068 IRF5Q13568 498 aa12.39□□□□□ -0.43
LSMEM1-202ENST00000439068 SLC16A10Q8TF71 515 aa12.39□□□□□ -0.43
LSMEM1-202ENST00000439068 KIAA1210Q9ULL0 1709 aa12.39□□□□□ -0.43
LSMEM1-202ENST00000439068 SLIT3O75094 1523 aa12.38□□□□□ -0.43
LSMEM1-202ENST00000439068 NR6A1Q15406 480 aa12.38□□□□□ -0.43
LSMEM1-202ENST00000439068 KCTD12Q96CX2 325 aaKnown RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms