RNA–Protein interactions for RNA: ENST00000438191.1

RPE-209, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 5

Gene RPE, Length 426 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-209ENST00000438191 MPNDQ8N594 471 aa13.12□□□□□ -0.31
RPE-209ENST00000438191 ZNF277Q9NRM2 450 aaPredicted RBP13.12□□□□□ -0.31
RPE-209ENST00000438191 PAPPA2Q9BXP8 1791 aa13.12□□□□□ -0.31
RPE-209ENST00000438191 PHKG2P15735 406 aa13.11□□□□□ -0.31
RPE-209ENST00000438191 SCNN1DP51172 638 aa13.11□□□□□ -0.31
RPE-209ENST00000438191 FKBP4Q02790 459 aaKnown RBP eCLIP13.11□□□□□ -0.31
RPE-209ENST00000438191 HDGFL2Q7Z4V5 671 aaPredicted RBP13.11□□□□□ -0.31
RPE-209ENST00000438191 CNKSR1Q969H4 720 aa13.11□□□□□ -0.31
RPE-209ENST00000438191 BRIP1Q9BX63 1249 aa13.11□□□□□ -0.31
RPE-209ENST00000438191 NARFQ9UHQ1 456 aa13.11□□□□□ -0.31
RPE-209ENST00000438191 IFNL2Q8IZJ0 200 aa13.1□□□□□ -0.31
RPE-209ENST00000438191 C7orf43Q8WVR3 580 aa13.1□□□□□ -0.31
RPE-209ENST00000438191 GLIS2Q9BZE0 524 aaPredicted RBP13.1□□□□□ -0.31
RPE-209ENST00000438191 HUNKP57058 714 aa13.09□□□□□ -0.31
RPE-209ENST00000438191 NCAPD2Q15021 1401 aa13.09□□□□□ -0.31
RPE-209ENST00000438191 RRS1Q15050 365 aaKnown RBP13.09□□□□□ -0.31
RPE-209ENST00000438191 CCDC93Q567U6 631 aa13.09□□□□□ -0.31
RPE-209ENST00000438191 STYK1Q6J9G0 422 aa13.09□□□□□ -0.31
RPE-209ENST00000438191 COG3Q96JB2 828 aa13.09□□□□□ -0.31
RPE-209ENST00000438191 ZNF408Q9H9D4 720 aa13.09□□□□□ -0.31
RPE-209ENST00000438191 HDAC9Q9UKV0 1011 aa13.09□□□□□ -0.31
RPE-209ENST00000438191 GJA3Q9Y6H8 435 aa13.09□□□□□ -0.31
RPE-209ENST00000438191 SOS1Q07889 1333 aaPredicted RBP13.09□□□□□ -0.31
RPE-209ENST00000438191 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.08□□□□□ -0.322e-7■■■□□ 16.9
RPE-209ENST00000438191 A0A1W2PP64 1363 aa13.07□□□□□ -0.32
RPE-209ENST00000438191 PTCD1O75127 700 aaKnown RBP13.07□□□□□ -0.32
RPE-209ENST00000438191 IARSP41252 1262 aaKnown RBP13.07□□□□□ -0.32
RPE-209ENST00000438191 HSP90AB2PQ58FF8 381 aa13.07□□□□□ -0.32
RPE-209ENST00000438191 RGMBQ6NW40 437 aa13.07□□□□□ -0.32
RPE-209ENST00000438191 CCDC24Q8N4L8 307 aa13.07□□□□□ -0.32
RPE-209ENST00000438191 ZNF296Q8WUU4 475 aaPredicted RBP13.07□□□□□ -0.32
RPE-209ENST00000438191 CSRNP1Q96S65 589 aa13.07□□□□□ -0.32
RPE-209ENST00000438191 ERVV-2B6SEH9 535 aa13.06□□□□□ -0.32
RPE-209ENST00000438191 SRGNP10124 158 aa13.06□□□□□ -0.32
RPE-209ENST00000438191 CHRDL2Q6WN34 429 aa13.06□□□□□ -0.32
RPE-209ENST00000438191 CCDC102AQ96A19 550 aa13.06□□□□□ -0.32
RPE-209ENST00000438191 H0YGN5 161 aa13.05□□□□□ -0.32
RPE-209ENST00000438191 PRR5LQ6MZQ0 368 aa13.05□□□□□ -0.32
RPE-209ENST00000438191 TMC1Q8TDI8 760 aa13.05□□□□□ -0.32
RPE-209ENST00000438191 SLC12A5Q9H2X9 1139 aa13.05□□□□□ -0.32
RPE-209ENST00000438191 PRDM6Q9NQX0 595 aa13.05□□□□□ -0.32
RPE-209ENST00000438191 RBM27Q9P2N5 1060 aaKnown RBP13.05□□□□□ -0.32
RPE-209ENST00000438191 PGAP2Q9UHJ9 254 aa13.05□□□□□ -0.32
RPE-209ENST00000438191 COL4A5P29400 1685 aa13.05□□□□□ -0.32
RPE-209ENST00000438191 EIF6P56537 245 aaKnown RBP13.04□□□□□ -0.32
RPE-209ENST00000438191 MASTLQ96GX5 879 aa13.04□□□□□ -0.32
RPE-209ENST00000438191 CEP290O15078 2479 aa13.04□□□□□ -0.32
RPE-209ENST00000438191 COL15A1P39059 1388 aa13.04□□□□□ -0.32
RPE-209ENST00000438191 TONSLQ96HA7 1378 aa13.04□□□□□ -0.32
RPE-209ENST00000438191 INTS3Q68E01 1043 aaKnown RBP13.03□□□□□ -0.32
RPE-209ENST00000438191 ADARB2Q9NS39 739 aaKnown RBP13.03□□□□□ -0.32
RPE-209ENST00000438191 EN2P19622 333 aaPredicted RBP13.02□□□□□ -0.33
RPE-209ENST00000438191 OLFM4Q6UX06 510 aa13.02□□□□□ -0.33
RPE-209ENST00000438191 JDP2Q8WYK2 163 aa13.02□□□□□ -0.33
RPE-209ENST00000438191 TERF2IPQ9NYB0 399 aa13.02□□□□□ -0.33
RPE-209ENST00000438191 KIAA0100Q14667 2235 aaKnown RBP13.01□□□□□ -0.33
RPE-209ENST00000438191 ZNF157P51786 506 aaPredicted RBP13.01□□□□□ -0.33
RPE-209ENST00000438191 RTKN2Q8IZC4 609 aa13.01□□□□□ -0.33
RPE-209ENST00000438191 FLT4P35916 1363 aa13□□□□□ -0.33
RPE-209ENST00000438191 SLC10A3P09131 477 aa13□□□□□ -0.33
RPE-209ENST00000438191 TBC1D9BQ66K14 1250 aa13□□□□□ -0.33
RPE-209ENST00000438191 CDC37L1Q7L3B6 337 aa13□□□□□ -0.33
RPE-209ENST00000438191 GPRC5DQ9NZD1 345 aa13□□□□□ -0.33
RPE-209ENST00000438191 ANKRD26Q9UPS8 1709 aa12.99□□□□□ -0.33
RPE-209ENST00000438191 UNC80Q8N2C7 3258 aa12.99□□□□□ -0.33
RPE-209ENST00000438191 TBC1D8O95759 1140 aa12.99□□□□□ -0.33
RPE-209ENST00000438191 CABP4P57796 275 aa12.99□□□□□ -0.33
RPE-209ENST00000438191 DNAJC10Q8IXB1 793 aa12.99□□□□□ -0.33
RPE-209ENST00000438191 REM2Q8IYK8 340 aaPredicted RBP12.99□□□□□ -0.33
RPE-209ENST00000438191 SNED1Q8TER0 1413 aa12.98□□□□□ -0.33
RPE-209ENST00000438191 GPR25O00155 361 aa12.98□□□□□ -0.33
RPE-209ENST00000438191 COL9A1P20849 921 aa12.98□□□□□ -0.33
RPE-209ENST00000438191 NOM1Q5C9Z4 860 aaKnown RBP12.98□□□□□ -0.33
RPE-209ENST00000438191 ZC3H15Q8WU90 426 aaKnown RBP12.98□□□□□ -0.33
RPE-209ENST00000438191 PRO3102Q9H379 93 aa12.98□□□□□ -0.33
RPE-209ENST00000438191 RANBP2P49792 3224 aaKnown RBP12.98□□□□□ -0.33
RPE-209ENST00000438191 KIF24Q5T7B8 1368 aa12.97□□□□□ -0.33
RPE-209ENST00000438191 CYP19A1P11511 503 aaPredicted RBP12.97□□□□□ -0.33
RPE-209ENST00000438191 DLK2Q6UY11 383 aa12.97□□□□□ -0.33
RPE-209ENST00000438191 GBA2Q9HCG7 927 aaPredicted RBP12.97□□□□□ -0.33
RPE-209ENST00000438191 ZBTB1Q9Y2K1 713 aa12.97□□□□□ -0.33
RPE-209ENST00000438191 SOX1O00570 391 aaPredicted RBP12.96□□□□□ -0.33
RPE-209ENST00000438191 HIRAP54198 1017 aaPredicted RBP12.96□□□□□ -0.33
RPE-209ENST00000438191 USP48Q86UV5 1035 aa12.96□□□□□ -0.33
RPE-209ENST00000438191 PSMD1Q99460 953 aa12.96□□□□□ -0.33
RPE-209ENST00000438191 HTTP42858 3142 aa12.96□□□□□ -0.34
RPE-209ENST00000438191 BRCA2P51587 3418 aa12.95□□□□□ -0.34
RPE-209ENST00000438191 HSP90AB1P08238 724 aaKnown RBP12.95□□□□□ -0.34
RPE-209ENST00000438191 C2orf69Q8N8R5 385 aa12.95□□□□□ -0.34
RPE-209ENST00000438191 CNBD1Q8NA66 436 aa12.95□□□□□ -0.34
RPE-209ENST00000438191 SCN7AQ01118 1682 aa12.95□□□□□ -0.34
RPE-209ENST00000438191 LAMB4A4D0S4 1761 aa12.94□□□□□ -0.34
RPE-209ENST00000438191 NPR1P16066 1061 aa12.94□□□□□ -0.34
RPE-209ENST00000438191 LRCH3Q96II8 777 aa12.94□□□□□ -0.34
RPE-209ENST00000438191 EYA1Q99502 592 aa12.94□□□□□ -0.34
RPE-209ENST00000438191 STXBP5LQ9Y2K9 1186 aa12.94□□□□□ -0.34
RPE-209ENST00000438191 ERBB4Q15303 1308 aa12.93□□□□□ -0.34
RPE-209ENST00000438191 FKTNO75072 461 aa12.93□□□□□ -0.34
RPE-209ENST00000438191 PLA2G5P39877 138 aa12.93□□□□□ -0.34
RPE-209ENST00000438191 ST5P78524 1137 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms