RNA–Protein interactions for RNA: ENST00000437034.6

CAST-209, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 3,377 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-209ENST00000437034 CHD1O14646 1710 aa6.36□□□□□ -1.39
CAST-209ENST00000437034 STK25O00506 426 aa6.35□□□□□ -1.39
CAST-209ENST00000437034 PPFIA2O75334 1257 aa6.35□□□□□ -1.39
CAST-209ENST00000437034 SLC7A5Q01650 507 aa6.35□□□□□ -1.39
CAST-209ENST00000437034 NFE2L2Q16236 605 aa6.35□□□□□ -1.39
CAST-209ENST00000437034 ZSCAN26Q16670 478 aa6.35□□□□□ -1.39
CAST-209ENST00000437034 PPP4R4Q6NUP7 873 aa6.35□□□□□ -1.39
CAST-209ENST00000437034 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.35□□□□□ -1.39
CAST-209ENST00000437034 NEK9Q8TD19 979 aa6.35□□□□□ -1.39
CAST-209ENST00000437034 TEKT1Q969V4 418 aa6.35□□□□□ -1.39
CAST-209ENST00000437034 SLC26A8Q96RN1 970 aa6.35□□□□□ -1.39
CAST-209ENST00000437034 FEZ1Q99689 392 aa6.35□□□□□ -1.39
CAST-209ENST00000437034 QTRT2Q9H974 415 aaKnown RBP6.35□□□□□ -1.39
CAST-209ENST00000437034 LZTS1Q9Y250 596 aa6.35□□□□□ -1.39
CAST-209ENST00000437034 RNASEH2AO75792 299 aaKnown RBP6.35□□□□□ -1.39
CAST-209ENST00000437034 CA8P35219 290 aa6.35□□□□□ -1.39
CAST-209ENST00000437034 MEX3CQ5U5Q3 659 aaKnown RBP6.35□□□□□ -1.39
CAST-209ENST00000437034 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.35□□□□□ -1.39
CAST-209ENST00000437034 KIAA1211Q6ZU35 1233 aa6.35□□□□□ -1.39
CAST-209ENST00000437034 ARHGEF25Q86VW2 580 aa6.35□□□□□ -1.39
CAST-209ENST00000437034 STAG2Q8N3U4 1231 aa6.35□□□□□ -1.39
CAST-209ENST00000437034 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.35□□□□□ -1.39
CAST-209ENST00000437034 IQCGQ9H095 443 aaKnown RBP6.35□□□□□ -1.39
CAST-209ENST00000437034 CHST12Q9NRB3 414 aa6.35□□□□□ -1.39
CAST-209ENST00000437034 DDX56Q9NY93 547 aaKnown RBP6.35□□□□□ -1.39
CAST-209ENST00000437034 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.35□□□□□ -1.39
CAST-209ENST00000437034 BRD3Q15059 726 aa6.35□□□□□ -1.39
CAST-209ENST00000437034 SAMD3Q8N6K7 520 aa6.35□□□□□ -1.39
CAST-209ENST00000437034 BRMS1Q9HCU9 246 aa6.35□□□□□ -1.39
CAST-209ENST00000437034 COG6Q9Y2V7 657 aa6.35□□□□□ -1.39
CAST-209ENST00000437034 N6AMT1Q9Y5N5 214 aa6.35□□□□□ -1.39
CAST-209ENST00000437034 ADD2P35612 726 aa6.34□□□□□ -1.39
CAST-209ENST00000437034 RNF187Q5TA31 235 aaPredicted RBP6.34□□□□□ -1.39
CAST-209ENST00000437034 DHX36Q9H2U1 1008 aaKnown RBP6.34□□□□□ -1.39
CAST-209ENST00000437034 TTF2Q9UNY4 1162 aaKnown RBP6.34□□□□□ -1.39
CAST-209ENST00000437034 DDB1Q16531 1140 aa6.34□□□□□ -1.39
CAST-209ENST00000437034 MYSM1Q5VVJ2 828 aa6.34□□□□□ -1.39
CAST-209ENST00000437034 PRPF38AQ8NAV1 312 aaKnown RBP6.34□□□□□ -1.39
CAST-209ENST00000437034 LSM14AQ8ND56 463 aaKnown RBP6.34□□□□□ -1.39
CAST-209ENST00000437034 VRTNQ9H8Y1 702 aa6.34□□□□□ -1.39
CAST-209ENST00000437034 KMT5AQ9NQR1 393 aa6.34□□□□□ -1.39
CAST-209ENST00000437034 TOMM22Q9NS69 142 aa6.34□□□□□ -1.39
CAST-209ENST00000437034 PRKAG2Q9UGJ0 569 aa6.34□□□□□ -1.39
CAST-209ENST00000437034 ODF2LQ9ULJ1 636 aa6.34□□□□□ -1.39
CAST-209ENST00000437034 NUP160Q12769 1436 aa6.34□□□□□ -1.39
CAST-209ENST00000437034 MAN1A1P33908 653 aa6.34□□□□□ -1.4
CAST-209ENST00000437034 PIK3CAP42336 1068 aa6.34□□□□□ -1.4
CAST-209ENST00000437034 MAGEA8P43361 318 aa6.34□□□□□ -1.4
CAST-209ENST00000437034 UBE4AQ14139 1066 aa6.34□□□□□ -1.4
CAST-209ENST00000437034 AGAP9Q5VTM2 703 aa6.34□□□□□ -1.4
CAST-209ENST00000437034 SAMD14Q8IZD0 417 aaPredicted RBP6.34□□□□□ -1.4
CAST-209ENST00000437034 ERP27Q96DN0 273 aa6.34□□□□□ -1.4
CAST-209ENST00000437034 IWS1Q96ST2 819 aa6.34□□□□□ -1.4
CAST-209ENST00000437034 MRGBPQ9NV56 204 aa6.34□□□□□ -1.4
CAST-209ENST00000437034 ARHGEF11O15085 1522 aa6.33□□□□□ -1.4
CAST-209ENST00000437034 POM121CA8CG34 1229 aa6.33□□□□□ -1.4
CAST-209ENST00000437034 SLC26A4O43511 780 aa6.33□□□□□ -1.4
CAST-209ENST00000437034 ATG7O95352 703 aa6.33□□□□□ -1.4
CAST-209ENST00000437034 MYCLP1P12525 358 aaPredicted RBP6.33□□□□□ -1.4
CAST-209ENST00000437034 STIP1P31948 543 aaKnown RBP6.33□□□□□ -1.4
CAST-209ENST00000437034 PTK7Q13308 1070 aa6.33□□□□□ -1.4
CAST-209ENST00000437034 SIM2Q14190 667 aaPredicted RBP6.33□□□□□ -1.4
CAST-209ENST00000437034 GOLGA6L1Q8N7Z2 621 aa6.33□□□□□ -1.4
CAST-209ENST00000437034 PBXIP1Q96AQ6 731 aa6.33□□□□□ -1.4
CAST-209ENST00000437034 EPAS1Q99814 870 aa6.33□□□□□ -1.4
CAST-209ENST00000437034 TSPYL2Q9H2G4 693 aaPredicted RBP6.33□□□□□ -1.4
CAST-209ENST00000437034 ZNF652Q9Y2D9 606 aa6.33□□□□□ -1.4
CAST-209ENST00000437034 RABGAP1Q9Y3P9 1069 aa6.33□□□□□ -1.4
CAST-209ENST00000437034 SESN3P58005 492 aa6.33□□□□□ -1.4
CAST-209ENST00000437034 PRPF4BQ13523 1007 aaKnown RBP6.33□□□□□ -1.4
CAST-209ENST00000437034 SWT1Q5T5J6 900 aaKnown RBP6.33□□□□□ -1.4
CAST-209ENST00000437034 ANKRD13DQ6ZTN6 518 aa6.33□□□□□ -1.4
CAST-209ENST00000437034 MAFFQ9ULX9 164 aa6.33□□□□□ -1.4
CAST-209ENST00000437034 JAKMIP3Q5VZ66 844 aa6.32□□□□□ -1.4
CAST-209ENST00000437034 SAPCD2Q86UD0 394 aa6.32□□□□□ -1.4
CAST-209ENST00000437034 CHPFQ8IZ52 775 aa6.32□□□□□ -1.4
CAST-209ENST00000437034 CDHR1Q96JP9 859 aa6.32□□□□□ -1.4
CAST-209ENST00000437034 XPO4Q9C0E2 1151 aaKnown RBP6.32□□□□□ -1.4
CAST-209ENST00000437034 COMMD8Q9NX08 183 aa6.32□□□□□ -1.4
CAST-209ENST00000437034 CPSF2Q9P2I0 782 aaKnown RBP6.32□□□□□ -1.4
CAST-209ENST00000437034 POU5F1BQ06416 359 aa6.32□□□□□ -1.4
CAST-209ENST00000437034 C11orf91Q3C1V1 193 aa6.32□□□□□ -1.4
CAST-209ENST00000437034 LLGL2Q6P1M3 1020 aa6.32□□□□□ -1.4
CAST-209ENST00000437034 SYNE3Q6ZMZ3 975 aa6.32□□□□□ -1.4
CAST-209ENST00000437034 MYLK4Q86YV6 388 aaPredicted RBP6.32□□□□□ -1.4
CAST-209ENST00000437034 GLMNQ92990 594 aa6.32□□□□□ -1.4
CAST-209ENST00000437034 FAM81BQ96LP2 452 aa6.32□□□□□ -1.4
CAST-209ENST00000437034 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.32□□□□□ -1.4
CAST-209ENST00000437034 VCAM1P19320 739 aa6.32□□□□□ -1.4
CAST-209ENST00000437034 NFXL1Q6ZNB6 911 aa6.32□□□□□ -1.4
CAST-209ENST00000437034 MCM10Q7L590 875 aa6.32□□□□□ -1.4
CAST-209ENST00000437034 RUNDC1Q96C34 613 aa6.32□□□□□ -1.4
CAST-209ENST00000437034 GINM1Q9NU53 330 aa6.32□□□□□ -1.4
CAST-209ENST00000437034 TBK1Q9UHD2 729 aa6.32□□□□□ -1.4
CAST-209ENST00000437034 CEP170Q5SW79 1584 aa6.32□□□□□ -1.4
CAST-209ENST00000437034 KINO60870 393 aaKnown RBP6.31□□□□□ -1.4
CAST-209ENST00000437034 INHBEP58166 350 aa6.31□□□□□ -1.4
CAST-209ENST00000437034 SPECC1Q5M775 1068 aa6.31□□□□□ -1.4
CAST-209ENST00000437034 AP1ARQ63HQ0 302 aa6.31□□□□□ -1.4
CAST-209ENST00000437034 PROM2Q8N271 834 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms