RNA–Protein interactions for RNA: ENST00000428128.1

RGPD1-203, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

TSL 1 (best)

Gene RGPD1, Length 3,479 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-203ENST00000428128 ZEB1P37275 1124 aaPredicted RBP4.13□□□□□ -1.75
RGPD1-203ENST00000428128 BMS1Q14692 1282 aaKnown RBP4.13□□□□□ -1.75
RGPD1-203ENST00000428128 RGL4Q8IZJ4 473 aa4.13□□□□□ -1.75
RGPD1-203ENST00000428128 TTC13Q8NBP0 860 aa4.13□□□□□ -1.75
RGPD1-203ENST00000428128 DHX38Q92620 1227 aaKnown RBP4.13□□□□□ -1.75
RGPD1-203ENST00000428128 KCNG1Q9UIX4 513 aa4.13□□□□□ -1.75
RGPD1-203ENST00000428128 RGPD8O14715 1765 aaPredicted RBP4.13□□□□□ -1.75
RGPD1-203ENST00000428128 RBBP6Q7Z6E9 1792 aaKnown RBP4.13□□□□□ -1.75
RGPD1-203ENST00000428128 RGPD5Q99666 1765 aa4.13□□□□□ -1.75
RGPD1-203ENST00000428128 PIK3C2AO00443 1686 aa4.13□□□□□ -1.75
RGPD1-203ENST00000428128 PAX3P23760 479 aa4.12□□□□□ -1.75
RGPD1-203ENST00000428128 AMPD3Q01432 767 aa4.12□□□□□ -1.75
RGPD1-203ENST00000428128 FMR1Q06787 632 aaKnown RBP eCLIP4.12□□□□□ -1.75
RGPD1-203ENST00000428128 LY75O60449 1722 aa4.12□□□□□ -1.75
RGPD1-203ENST00000428128 HLTFQ14527 1009 aaKnown RBP eCLIP4.12□□□□□ -1.75
RGPD1-203ENST00000428128 DCBLD2Q96PD2 775 aa4.12□□□□□ -1.75
RGPD1-203ENST00000428128 ARHGEF10LQ9HCE6 1279 aa4.12□□□□□ -1.75
RGPD1-203ENST00000428128 IFT57Q9NWB7 429 aa4.12□□□□□ -1.75
RGPD1-203ENST00000428128 NOVA2Q9UNW9 492 aaKnown RBP4.12□□□□□ -1.75
RGPD1-203ENST00000428128 MIA2Q96PC5 1412 aa4.12□□□□□ -1.75
RGPD1-203ENST00000428128 POTEB2H3BUK9 544 aa4.12□□□□□ -1.75
RGPD1-203ENST00000428128 DKK1O94907 266 aa4.12□□□□□ -1.75
RGPD1-203ENST00000428128 FOSBP53539 338 aa4.12□□□□□ -1.75
RGPD1-203ENST00000428128 PTPN12Q05209 780 aaKnown RBP4.12□□□□□ -1.75
RGPD1-203ENST00000428128 RNF187Q5TA31 235 aaPredicted RBP4.12□□□□□ -1.75
RGPD1-203ENST00000428128 TBC1D9Q6ZT07 1266 aa4.12□□□□□ -1.75
RGPD1-203ENST00000428128 CCDC146Q8IYE0 955 aa4.12□□□□□ -1.75
RGPD1-203ENST00000428128 SPIRE2Q8WWL2 714 aa4.12□□□□□ -1.75
RGPD1-203ENST00000428128 SCINQ9Y6U3 715 aa4.12□□□□□ -1.75
RGPD1-203ENST00000428128 ICMTO60725 284 aa4.11□□□□□ -1.75
RGPD1-203ENST00000428128 USP17L8P0C7I0 530 aa4.11□□□□□ -1.75
RGPD1-203ENST00000428128 MAPRE1Q15691 268 aaKnown RBP4.11□□□□□ -1.75
RGPD1-203ENST00000428128 SWI5Q1ZZU3 235 aa4.11□□□□□ -1.75
RGPD1-203ENST00000428128 EFCAB2Q5VUJ9 269 aa4.11□□□□□ -1.75
RGPD1-203ENST00000428128 RINLQ6ZS11 566 aa4.11□□□□□ -1.75
RGPD1-203ENST00000428128 NT5DC4Q86YG4 428 aa4.11□□□□□ -1.75
RGPD1-203ENST00000428128 AVENQ9NQS1 362 aaPredicted RBP4.11□□□□□ -1.75
RGPD1-203ENST00000428128 DCTN4Q9UJW0 460 aa4.11□□□□□ -1.75
RGPD1-203ENST00000428128 ARHGEF28Q8N1W1 1705 aaKnown RBP4.11□□□□□ -1.75
RGPD1-203ENST00000428128 NRXN1Q9ULB1 1477 aa4.11□□□□□ -1.75
RGPD1-203ENST00000428128 KIF3CO14782 793 aa4.11□□□□□ -1.75
RGPD1-203ENST00000428128 MDM2Q00987 491 aaPredicted RBP4.11□□□□□ -1.75
RGPD1-203ENST00000428128 SAMD3Q8N6K7 520 aa4.11□□□□□ -1.75
RGPD1-203ENST00000428128 UPF1Q92900 1129 aaKnown RBP eCLIP4.11□□□□□ -1.75
RGPD1-203ENST00000428128 IL17RAQ96F46 866 aa4.11□□□□□ -1.75
RGPD1-203ENST00000428128 NHSQ6T4R5 1651 aa4.11□□□□□ -1.75
RGPD1-203ENST00000428128 C1orf167Q5SNV9 1468 aa4.11□□□□□ -1.75
RGPD1-203ENST00000428128 TECPR2O15040 1411 aa4.11□□□□□ -1.75
RGPD1-203ENST00000428128 IFRD1O00458 451 aaPredicted RBP4.11□□□□□ -1.75
RGPD1-203ENST00000428128 PRC1O43663 620 aa4.11□□□□□ -1.75
RGPD1-203ENST00000428128 FGRP09769 529 aa4.11□□□□□ -1.75
RGPD1-203ENST00000428128 RASSF7Q02833 373 aa4.11□□□□□ -1.75
RGPD1-203ENST00000428128 POU5F1BQ06416 359 aa4.11□□□□□ -1.75
RGPD1-203ENST00000428128 CCDC61Q9Y6R9 512 aa4.11□□□□□ -1.75
RGPD1-203ENST00000428128 AFDNP55196 1824 aaKnown RBP4.1□□□□□ -1.75
RGPD1-203ENST00000428128 PLEKHG2Q9H7P9 1386 aa4.1□□□□□ -1.75
RGPD1-203ENST00000428128 A0A0U1RQG5 324 aaPredicted RBP4.1□□□□□ -1.75
RGPD1-203ENST00000428128 HOXA2O43364 376 aa4.1□□□□□ -1.75
RGPD1-203ENST00000428128 COPB2P35606 906 aa4.1□□□□□ -1.75
RGPD1-203ENST00000428128 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.1□□□□□ -1.75
RGPD1-203ENST00000428128 CEP63Q96MT8 703 aa4.1□□□□□ -1.75
RGPD1-203ENST00000428128 PCDHB8Q9UN66 801 aa4.1□□□□□ -1.75
RGPD1-203ENST00000428128 PCDHB13Q9Y5F0 798 aa4.1□□□□□ -1.75
RGPD1-203ENST00000428128 NRKQ7Z2Y5 1582 aa4.1□□□□□ -1.75
RGPD1-203ENST00000428128 NFE2L2Q16236 605 aa4.1□□□□□ -1.75
RGPD1-203ENST00000428128 TMC4Q7Z404 712 aa4.1□□□□□ -1.75
RGPD1-203ENST00000428128 LRP10Q7Z4F1 713 aa4.1□□□□□ -1.75
RGPD1-203ENST00000428128 HELBQ8NG08 1087 aaPredicted RBP4.1□□□□□ -1.75
RGPD1-203ENST00000428128 RGS17Q9UGC6 210 aaPredicted RBP4.1□□□□□ -1.75
RGPD1-203ENST00000428128 FBXO9Q9UK97 447 aaPredicted RBP4.1□□□□□ -1.75
RGPD1-203ENST00000428128 CHIC2Q9UKJ5 165 aa4.1□□□□□ -1.75
RGPD1-203ENST00000428128 BRCA1P38398 1863 aaKnown RBP4.1□□□□□ -1.75
RGPD1-203ENST00000428128 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.1□□□□□ -1.75
RGPD1-203ENST00000428128 TMEM238LA0A1B0GVL6 79 aa4.09□□□□□ -1.75
RGPD1-203ENST00000428128 ARHGAP4P98171 946 aa4.09□□□□□ -1.75
RGPD1-203ENST00000428128 PTK7Q13308 1070 aa4.09□□□□□ -1.75
RGPD1-203ENST00000428128 DSG2Q14126 1118 aa4.09□□□□□ -1.75
RGPD1-203ENST00000428128 TSNAXIP1Q2TAA8 658 aa4.09□□□□□ -1.75
RGPD1-203ENST00000428128 TMEM95Q3KNT9 176 aa4.09□□□□□ -1.75
RGPD1-203ENST00000428128 RPS6KC1Q96S38 1066 aa4.09□□□□□ -1.75
RGPD1-203ENST00000428128 PNMA2Q9UL42 364 aa4.09□□□□□ -1.75
RGPD1-203ENST00000428128 PRR12Q9ULL5 1215 aa4.09□□□□□ -1.75
RGPD1-203ENST00000428128 C10orf71Q711Q0 1435 aa4.09□□□□□ -1.75
RGPD1-203ENST00000428128 DNAJC6O75061 913 aa4.09□□□□□ -1.75
RGPD1-203ENST00000428128 DAB2P98082 770 aa4.09□□□□□ -1.75
RGPD1-203ENST00000428128 ATRNO75882 1429 aa4.09□□□□□ -1.75
RGPD1-203ENST00000428128 MAP3K5Q99683 1374 aa4.09□□□□□ -1.75
RGPD1-203ENST00000428128 CCDC141Q6ZP82 1450 aa4.09□□□□□ -1.75
RGPD1-203ENST00000428128 SH3BP5O60239 455 aa4.09□□□□□ -1.76
RGPD1-203ENST00000428128 SERPINB4P48594 390 aa4.09□□□□□ -1.76
RGPD1-203ENST00000428128 DSC3Q14574 896 aa4.09□□□□□ -1.76
RGPD1-203ENST00000428128 MCF2L2Q86YR7 1114 aa4.09□□□□□ -1.76
RGPD1-203ENST00000428128 RBCK1Q9BYM8 510 aa4.09□□□□□ -1.76
RGPD1-203ENST00000428128 COL18A1P39060 1754 aa4.09□□□□□ -1.76
RGPD1-203ENST00000428128 GIGYF1O75420 1035 aaPredicted RBP4.08□□□□□ -1.76
RGPD1-203ENST00000428128 HSPA1LP34931 641 aa4.08□□□□□ -1.76
RGPD1-203ENST00000428128 ITGAEP38570 1179 aa4.08□□□□□ -1.76
RGPD1-203ENST00000428128 PPP1R18Q6NYC8 613 aa4.08□□□□□ -1.76
RGPD1-203ENST00000428128 METTL3Q86U44 580 aaKnown RBP4.08□□□□□ -1.76
RGPD1-203ENST00000428128 GABBR1Q9UBS5 961 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms