RNA–Protein interactions for RNA: ENST00000424846.3

TPM3P9-201, Transcript of tropomyosin 3 pseudogene 9, humanhuman

TSL 1 (best) BASIC

Gene TPM3P9, Length 2,920 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P9-201ENST00000424846 HYPKQ9NX55 129 aa17.07■□□□□ 0.32
TPM3P9-201ENST00000424846 ADCY5O95622 1261 aa17.07■□□□□ 0.32
TPM3P9-201ENST00000424846 CCDC183Q5T5S1 534 aa17.07■□□□□ 0.32
TPM3P9-201ENST00000424846 NBPF6Q5VWK0 638 aa17.07■□□□□ 0.32
TPM3P9-201ENST00000424846 PRPF40BQ6NWY9 871 aaKnown RBP17.07■□□□□ 0.32
TPM3P9-201ENST00000424846 NECAB1Q8N987 351 aa17.07■□□□□ 0.32
TPM3P9-201ENST00000424846 NBPF4Q96M43 638 aa17.07■□□□□ 0.32
TPM3P9-201ENST00000424846 PRAMEF22A3QJZ6 481 aa17.07■□□□□ 0.32
TPM3P9-201ENST00000424846 PROSER3Q2NL68 480 aa17.07■□□□□ 0.32
TPM3P9-201ENST00000424846 SMC3Q9UQE7 1217 aa17.07■□□□□ 0.32
TPM3P9-201ENST00000424846 ADCY9O60503 1353 aa17.07■□□□□ 0.32
TPM3P9-201ENST00000424846 GJB2P29033 226 aa17.06■□□□□ 0.32
TPM3P9-201ENST00000424846 OS9Q13438 667 aaPredicted RBP17.06■□□□□ 0.32
TPM3P9-201ENST00000424846 JAKMIP1Q96N16 626 aaKnown RBP17.06■□□□□ 0.32
TPM3P9-201ENST00000424846 FAM173BQ6P4H8 233 aa17.05■□□□□ 0.32
TPM3P9-201ENST00000424846 MTMR6Q9Y217 621 aa17.05■□□□□ 0.32
TPM3P9-201ENST00000424846 PLCB2Q00722 1185 aa17.05■□□□□ 0.32
TPM3P9-201ENST00000424846 KIAA2012Q0VF49 1180 aa17.05■□□□□ 0.32
TPM3P9-201ENST00000424846 CSPP1Q1MSJ5 1256 aa17.05■□□□□ 0.32
TPM3P9-201ENST00000424846 LRRC59Q96AG4 307 aaKnown RBP17.05■□□□□ 0.32
TPM3P9-201ENST00000424846 TCEANC2Q96MN5 208 aa17.05■□□□□ 0.32
TPM3P9-201ENST00000424846 TAF6LQ9Y6J9 622 aa17.05■□□□□ 0.32
TPM3P9-201ENST00000424846 CEMIPQ8WUJ3 1361 aa17.04■□□□□ 0.32
TPM3P9-201ENST00000424846 FAM177BA6PVY3 158 aa17.04■□□□□ 0.32
TPM3P9-201ENST00000424846 KCNA6P17658 529 aa17.04■□□□□ 0.32
TPM3P9-201ENST00000424846 CWF19L2Q2TBE0 894 aaKnown RBP17.04■□□□□ 0.32
TPM3P9-201ENST00000424846 MPRIPQ6WCQ1 1025 aa17.04■□□□□ 0.32
TPM3P9-201ENST00000424846 PHF14O94880 888 aa17.04■□□□□ 0.32
TPM3P9-201ENST00000424846 UBE2HP62256 183 aa17.04■□□□□ 0.32
TPM3P9-201ENST00000424846 SASS6Q6UVJ0 657 aa17.04■□□□□ 0.32
TPM3P9-201ENST00000424846 EID1Q9Y6B2 187 aa17.04■□□□□ 0.32
TPM3P9-201ENST00000424846 ME3Q16798 604 aa17.03■□□□□ 0.32
TPM3P9-201ENST00000424846 FAM227BQ96M60 508 aa17.03■□□□□ 0.32
TPM3P9-201ENST00000424846 FUCA2Q9BTY2 467 aa17.03■□□□□ 0.32
TPM3P9-201ENST00000424846 DIAPH3Q9NSV4 1193 aa17.03■□□□□ 0.32
TPM3P9-201ENST00000424846 CHMP3Q9Y3E7 222 aa17.03■□□□□ 0.32
TPM3P9-201ENST00000424846 VPS37CA5D8V6 355 aaPredicted RBP17.03■□□□□ 0.32
TPM3P9-201ENST00000424846 PDRG1Q9NUG6 133 aa17.03■□□□□ 0.32
TPM3P9-201ENST00000424846 EPB41L2O43491 1005 aaKnown RBP17.02■□□□□ 0.32
TPM3P9-201ENST00000424846 FERMT3Q86UX7 667 aa17.02■□□□□ 0.32
TPM3P9-201ENST00000424846 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.02■□□□□ 0.32
TPM3P9-201ENST00000424846 PKNOX2Q96KN3 472 aa17.02■□□□□ 0.31
TPM3P9-201ENST00000424846 CRYBG1Q9Y4K1 1723 aa17.01■□□□□ 0.31
TPM3P9-201ENST00000424846 GLRX3O76003 335 aaKnown RBP17.01■□□□□ 0.31
TPM3P9-201ENST00000424846 DNTTIP2Q5QJE6 756 aaKnown RBP17.01■□□□□ 0.31
TPM3P9-201ENST00000424846 TBX22Q9Y458 520 aa17.01■□□□□ 0.31
TPM3P9-201ENST00000424846 BABAM1Q9NWV8 329 aa17.01■□□□□ 0.31
TPM3P9-201ENST00000424846 TLR7Q9NYK1 1049 aaKnown RBP17.01■□□□□ 0.31
TPM3P9-201ENST00000424846 TPCN1Q9ULQ1 816 aa17.01■□□□□ 0.31
TPM3P9-201ENST00000424846 MAP3K2Q9Y2U5 619 aa17.01■□□□□ 0.31
TPM3P9-201ENST00000424846 USP42Q9H9J4 1324 aaKnown RBP17.01■□□□□ 0.31
TPM3P9-201ENST00000424846 KDM4AO75164 1064 aa17■□□□□ 0.31
TPM3P9-201ENST00000424846 NOLC1Q14978 699 aaKnown RBP eCLIP17■□□□□ 0.31
TPM3P9-201ENST00000424846 CLASRPQ8N2M8 674 aaKnown RBP17■□□□□ 0.31
TPM3P9-201ENST00000424846 FAM184AQ8NB25 1140 aa17■□□□□ 0.31
TPM3P9-201ENST00000424846 CCDC8Q9H0W5 538 aaPredicted RBP17■□□□□ 0.31
TPM3P9-201ENST00000424846 ZSWIM6Q9HCJ5 1215 aa17■□□□□ 0.31
TPM3P9-201ENST00000424846 BTBD11A6QL63 1104 aa17■□□□□ 0.31
TPM3P9-201ENST00000424846 DYNC1I1O14576 645 aa17■□□□□ 0.31
TPM3P9-201ENST00000424846 NECTIN1Q15223 517 aa17■□□□□ 0.31
TPM3P9-201ENST00000424846 UVSSAQ2YD98 709 aa17■□□□□ 0.31
TPM3P9-201ENST00000424846 PIBF1Q8WXW3 757 aa17■□□□□ 0.31
TPM3P9-201ENST00000424846 ECHDC1Q9NTX5 307 aa17■□□□□ 0.31
TPM3P9-201ENST00000424846 RGPD2P0DJD1 1756 aa17■□□□□ 0.31
TPM3P9-201ENST00000424846 AACSQ86V21 672 aa16.99■□□□□ 0.31
TPM3P9-201ENST00000424846 KLHDC4Q8TBB5 520 aa16.99■□□□□ 0.31
TPM3P9-201ENST00000424846 KAZALD1Q96I82 304 aa16.99■□□□□ 0.31
TPM3P9-201ENST00000424846 RBM8AQ9Y5S9 174 aaKnown RBP16.99■□□□□ 0.31
TPM3P9-201ENST00000424846 TTC41PQ6P2S7 1318 aa16.99■□□□□ 0.31
TPM3P9-201ENST00000424846 CDC37L1Q7L3B6 337 aa16.99■□□□□ 0.31
TPM3P9-201ENST00000424846 SASH1O94885 1247 aa16.98■□□□□ 0.31
TPM3P9-201ENST00000424846 VPS53Q5VIR6 699 aa16.98■□□□□ 0.31
TPM3P9-201ENST00000424846 TTC6Q86TZ1 520 aa16.98■□□□□ 0.31
TPM3P9-201ENST00000424846 SPC24Q8NBT2 197 aa16.98■□□□□ 0.31
TPM3P9-201ENST00000424846 EAF2Q96CJ1 260 aaPredicted RBP16.98■□□□□ 0.31
TPM3P9-201ENST00000424846 KCNF1Q9H3M0 494 aa16.98■□□□□ 0.31
TPM3P9-201ENST00000424846 C9orf78Q9NZ63 289 aaPredicted RBP16.98■□□□□ 0.31
TPM3P9-201ENST00000424846 NMIQ13287 307 aaPredicted RBP16.98■□□□□ 0.31
TPM3P9-201ENST00000424846 ZNF530Q6P9A1 599 aaPredicted RBP16.98■□□□□ 0.31
TPM3P9-201ENST00000424846 PYCARDQ9ULZ3 195 aa16.98■□□□□ 0.31
TPM3P9-201ENST00000424846 CYP46A1Q9Y6A2 500 aa16.98■□□□□ 0.31
TPM3P9-201ENST00000424846 CCDC171Q6TFL3 1326 aa16.98■□□□□ 0.31
TPM3P9-201ENST00000424846 IFIT2P09913 472 aaKnown RBP16.97■□□□□ 0.31
TPM3P9-201ENST00000424846 LIG1P18858 919 aa16.97■□□□□ 0.31
TPM3P9-201ENST00000424846 TEFQ10587 303 aa16.97■□□□□ 0.31
TPM3P9-201ENST00000424846 CAMK4Q16566 473 aa16.97■□□□□ 0.31
TPM3P9-201ENST00000424846 CREB3L3Q68CJ9 461 aa16.97■□□□□ 0.31
TPM3P9-201ENST00000424846 EDC3Q96F86 508 aaKnown RBP16.97■□□□□ 0.31
TPM3P9-201ENST00000424846 SIL1Q9H173 461 aa16.97■□□□□ 0.31
TPM3P9-201ENST00000424846 LTN1O94822 1766 aa16.97■□□□□ 0.31
TPM3P9-201ENST00000424846 A0A0D9SFI3 127 aa16.97■□□□□ 0.31
TPM3P9-201ENST00000424846 CHGBP05060 677 aa16.97■□□□□ 0.31
TPM3P9-201ENST00000424846 MED1Q15648 1581 aaPredicted RBP16.97■□□□□ 0.31
TPM3P9-201ENST00000424846 SUCLG2Q96I99 432 aa16.97■□□□□ 0.31
TPM3P9-201ENST00000424846 MTX1Q13505 466 aa16.97■□□□□ 0.31
TPM3P9-201ENST00000424846 ZNF710Q8N1W2 664 aa16.97■□□□□ 0.31
TPM3P9-201ENST00000424846 IP6K1Q92551 441 aa16.97■□□□□ 0.31
TPM3P9-201ENST00000424846 PXDNQ92626 1479 aa16.96■□□□□ 0.31
TPM3P9-201ENST00000424846 KDM3BQ7LBC6 1761 aa16.96■□□□□ 0.31
TPM3P9-201ENST00000424846 AIMP1Q12904 312 aaKnown RBP16.96■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms