RNA–Protein interactions for RNA: ENST00000395198.7

HERC4-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERC4, Length 4,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-204ENST00000395198 CDKN1CP49918 316 aaPredicted RBP5.13□□□□□ -1.59
HERC4-204ENST00000395198 IQCEQ6IPM2 695 aa5.13□□□□□ -1.59
HERC4-204ENST00000395198 CFAP53Q96M91 514 aa5.13□□□□□ -1.59
HERC4-204ENST00000395198 FAM161BQ96MY7 647 aa5.13□□□□□ -1.59
HERC4-204ENST00000395198 AGAP3Q96P47 875 aa5.13□□□□□ -1.59
HERC4-204ENST00000395198 LARP6Q9BRS8 491 aaKnown RBP5.13□□□□□ -1.59
HERC4-204ENST00000395198 HOXC10Q9NYD6 342 aa5.13□□□□□ -1.59
HERC4-204ENST00000395198 CGNQ9P2M7 1197 aaKnown RBP5.13□□□□□ -1.59
HERC4-204ENST00000395198 TAGLN3Q9UI15 199 aa5.13□□□□□ -1.59
HERC4-204ENST00000395198 CCDC163A0A0D9SF12 145 aa5.13□□□□□ -1.59
HERC4-204ENST00000395198 GRXCR2A6NFK2 248 aa5.13□□□□□ -1.59
HERC4-204ENST00000395198 HTATSF1O43719 755 aaKnown RBP5.13□□□□□ -1.59
HERC4-204ENST00000395198 FOSL1P15407 271 aa5.13□□□□□ -1.59
HERC4-204ENST00000395198 HOXD11P31277 338 aaPredicted RBP5.13□□□□□ -1.59
HERC4-204ENST00000395198 RFC5P40937 340 aa5.13□□□□□ -1.59
HERC4-204ENST00000395198 PIK3CAP42336 1068 aa5.13□□□□□ -1.59
HERC4-204ENST00000395198 TAF11Q15544 211 aa5.13□□□□□ -1.59
HERC4-204ENST00000395198 PPP2R3BQ9Y5P8 575 aa5.13□□□□□ -1.59
HERC4-204ENST00000395198 PABPN1LA6NDY0 278 aaKnown RBP5.13□□□□□ -1.59
HERC4-204ENST00000395198 POU3F3P20264 500 aaPredicted RBP5.13□□□□□ -1.59
HERC4-204ENST00000395198 FAM161AQ3B820 660 aa5.13□□□□□ -1.59
HERC4-204ENST00000395198 SLFNL1Q499Z3 407 aa5.13□□□□□ -1.59
HERC4-204ENST00000395198 ACBD5Q5T8D3 534 aaPredicted RBP5.13□□□□□ -1.59
HERC4-204ENST00000395198 SAMD3Q8N6K7 520 aa5.13□□□□□ -1.59
HERC4-204ENST00000395198 ARMC5Q96C12 935 aa5.13□□□□□ -1.59
HERC4-204ENST00000395198 VMP1Q96GC9 406 aa5.13□□□□□ -1.59
HERC4-204ENST00000395198 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.13□□□□□ -1.59
HERC4-204ENST00000395198 MAFFQ9ULX9 164 aa5.13□□□□□ -1.59
HERC4-204ENST00000395198 PPP1R3GB7ZBB8 358 aa5.13□□□□□ -1.59
HERC4-204ENST00000395198 TRAPPC10P48553 1259 aa5.13□□□□□ -1.59
HERC4-204ENST00000395198 SEC13P55735 322 aa5.13□□□□□ -1.59
HERC4-204ENST00000395198 MSL1Q68DK7 614 aa5.13□□□□□ -1.59
HERC4-204ENST00000395198 SH3KBP1Q96B97 665 aa5.13□□□□□ -1.59
HERC4-204ENST00000395198 C12orf49Q9H741 205 aa5.13□□□□□ -1.59
HERC4-204ENST00000395198 ANO2Q9NQ90 1003 aa5.13□□□□□ -1.59
HERC4-204ENST00000395198 A6NCN8 305 aa5.12□□□□□ -1.59
HERC4-204ENST00000395198 BBOX1O75936 387 aa5.12□□□□□ -1.59
HERC4-204ENST00000395198 RPN1P04843 607 aaKnown RBP5.12□□□□□ -1.59
HERC4-204ENST00000395198 CCDC172P0C7W6 258 aa5.12□□□□□ -1.59
HERC4-204ENST00000395198 IL4RP24394 825 aa5.12□□□□□ -1.59
HERC4-204ENST00000395198 FANCCQ00597 558 aa5.12□□□□□ -1.59
HERC4-204ENST00000395198 STAG2Q8N3U4 1231 aa5.12□□□□□ -1.59
HERC4-204ENST00000395198 SUDS3Q9H7L9 328 aaPredicted RBP5.12□□□□□ -1.59
HERC4-204ENST00000395198 EVLQ9UI08 416 aaPredicted RBP5.12□□□□□ -1.59
HERC4-204ENST00000395198 A0A1W2PRQ8 180 aa5.12□□□□□ -1.59
HERC4-204ENST00000395198 CTAGE5O15320 804 aa5.12□□□□□ -1.59
HERC4-204ENST00000395198 PIP5K1CO60331 668 aa5.12□□□□□ -1.59
HERC4-204ENST00000395198 VAMP4O75379 141 aa5.12□□□□□ -1.59
HERC4-204ENST00000395198 TPPPO94811 219 aa5.12□□□□□ -1.59
HERC4-204ENST00000395198 RASA3Q14644 834 aa5.12□□□□□ -1.59
HERC4-204ENST00000395198 DDB1Q16531 1140 aa5.12□□□□□ -1.59
HERC4-204ENST00000395198 C14orf80Q86SX3 495 aa5.12□□□□□ -1.59
HERC4-204ENST00000395198 PPM1EQ8WY54 764 aa5.12□□□□□ -1.59
HERC4-204ENST00000395198 XPO4Q9C0E2 1151 aaKnown RBP5.12□□□□□ -1.59
HERC4-204ENST00000395198 TFIP11Q9UBB9 837 aaKnown RBP5.12□□□□□ -1.59
HERC4-204ENST00000395198 THOC2Q8NI27 1593 aaKnown RBP5.12□□□□□ -1.59
HERC4-204ENST00000395198 BPIFB3P59826 476 aa5.12□□□□□ -1.59
HERC4-204ENST00000395198 NFE2Q16621 373 aaPredicted RBP5.12□□□□□ -1.59
HERC4-204ENST00000395198 CCBE1Q6UXH8 406 aaPredicted RBP5.12□□□□□ -1.59
HERC4-204ENST00000395198 PAF1Q8N7H5 531 aa5.12□□□□□ -1.59
HERC4-204ENST00000395198 MYRIPQ8NFW9 859 aa5.12□□□□□ -1.59
HERC4-204ENST00000395198 CHMP7Q8WUX9 453 aaPredicted RBP5.12□□□□□ -1.59
HERC4-204ENST00000395198 SGIP1Q9BQI5 828 aa5.12□□□□□ -1.59
HERC4-204ENST00000395198 RABL2AQ9UBK7 228 aaPredicted RBP5.12□□□□□ -1.59
HERC4-204ENST00000395198 CC2D2AQ9P2K1 1620 aa5.12□□□□□ -1.59
HERC4-204ENST00000395198 RASA1P20936 1047 aa5.11□□□□□ -1.59
HERC4-204ENST00000395198 HOXD10P28358 340 aa5.11□□□□□ -1.59
HERC4-204ENST00000395198 SPECC1Q5M775 1068 aa5.11□□□□□ -1.59
HERC4-204ENST00000395198 JAMLQ86YT9 394 aa5.11□□□□□ -1.59
HERC4-204ENST00000395198 SNX21Q969T3 373 aa5.11□□□□□ -1.59
HERC4-204ENST00000395198 CCDC34Q96HJ3 373 aa5.11□□□□□ -1.59
HERC4-204ENST00000395198 MFRPQ9BY79 579 aa5.11□□□□□ -1.59
HERC4-204ENST00000395198 TMX1Q9H3N1 280 aa5.11□□□□□ -1.59
HERC4-204ENST00000395198 TBK1Q9UHD2 729 aa5.11□□□□□ -1.59
HERC4-204ENST00000395198 KIF1CO43896 1103 aaKnown RBP5.11□□□□□ -1.59
HERC4-204ENST00000395198 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.11□□□□□ -1.59
HERC4-204ENST00000395198 MCF2L2Q86YR7 1114 aa5.11□□□□□ -1.59
HERC4-204ENST00000395198 ATRIPQ8WXE1 791 aa5.11□□□□□ -1.59
HERC4-204ENST00000395198 COMMD8Q9NX08 183 aa5.11□□□□□ -1.59
HERC4-204ENST00000395198 BAIAP3O94812 1187 aa5.11□□□□□ -1.59
HERC4-204ENST00000395198 INMTO95050 263 aa5.11□□□□□ -1.59
HERC4-204ENST00000395198 FERMT3Q86UX7 667 aa5.11□□□□□ -1.59
HERC4-204ENST00000395198 ZFPM2Q8WW38 1151 aa5.11□□□□□ -1.59
HERC4-204ENST00000395198 TTC14Q96N46 770 aa5.11□□□□□ -1.59
HERC4-204ENST00000395198 OSBPL5Q9H0X9 879 aaPredicted RBP5.11□□□□□ -1.59
HERC4-204ENST00000395198 ZNF652Q9Y2D9 606 aa5.11□□□□□ -1.59
HERC4-204ENST00000395198 KIF16BQ96L93 1317 aa5.11□□□□□ -1.59
HERC4-204ENST00000395198 IRX5P78411 483 aaPredicted RBP5.11□□□□□ -1.59
HERC4-204ENST00000395198 GIMAP1Q8WWP7 306 aa5.11□□□□□ -1.59
HERC4-204ENST00000395198 LUZP4Q9P127 313 aa5.11□□□□□ -1.59
HERC4-204ENST00000395198 ERCC6Q03468 1493 aa5.1□□□□□ -1.59
HERC4-204ENST00000395198 NBPF7P0C2Y1 421 aaPredicted RBP5.1□□□□□ -1.59
HERC4-204ENST00000395198 OAS2P29728 719 aaKnown RBP5.1□□□□□ -1.59
HERC4-204ENST00000395198 ZNF131P52739 623 aa5.1□□□□□ -1.59
HERC4-204ENST00000395198 MDM2Q00987 491 aaPredicted RBP5.1□□□□□ -1.59
HERC4-204ENST00000395198 AMOTQ4VCS5 1084 aa5.1□□□□□ -1.59
HERC4-204ENST00000395198 RASGRP2Q7LDG7 609 aa5.1□□□□□ -1.59
HERC4-204ENST00000395198 POLR3CQ9BUI4 534 aaPredicted RBP5.1□□□□□ -1.59
HERC4-204ENST00000395198 TYW1Q9NV66 732 aaKnown RBP5.1□□□□□ -1.59
HERC4-204ENST00000395198 TRMT1Q9NXH9 659 aaKnown RBP5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms