RNA–Protein interactions for RNA: ENST00000339861.8

SEMA4D-201, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 4,258 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-201ENST00000339861 CHST3Q7LGC8 479 aa13.12□□□□□ -0.31
SEMA4D-201ENST00000339861 EVI5LQ96CN4 794 aa13.12□□□□□ -0.31
SEMA4D-201ENST00000339861 PPP6R1Q9UPN7 881 aa13.12□□□□□ -0.31
SEMA4D-201ENST00000339861 A0A087WZG4 1122 aa13.12□□□□□ -0.31
SEMA4D-201ENST00000339861 BRD1O95696 1058 aa13.12□□□□□ -0.31
SEMA4D-201ENST00000339861 CABP4P57796 275 aa13.12□□□□□ -0.31
SEMA4D-201ENST00000339861 NBPF6Q5VWK0 638 aa13.12□□□□□ -0.31
SEMA4D-201ENST00000339861 COPS6Q7L5N1 327 aa13.12□□□□□ -0.31
SEMA4D-201ENST00000339861 NBPF4Q96M43 638 aa13.12□□□□□ -0.31
SEMA4D-201ENST00000339861 STRN4Q9NRL3 753 aa13.12□□□□□ -0.31
SEMA4D-201ENST00000339861 LRRC7Q96NW7 1537 aa13.12□□□□□ -0.31
SEMA4D-201ENST00000339861 RALYLQ86SE5 291 aaKnown RBP13.12□□□□□ -0.31
SEMA4D-201ENST00000339861 HOMER1Q86YM7 354 aa13.12□□□□□ -0.31
SEMA4D-201ENST00000339861 DACT1Q9NYF0 836 aa13.12□□□□□ -0.31
SEMA4D-201ENST00000339861 SGSM2O43147 1006 aa13.11□□□□□ -0.31
SEMA4D-201ENST00000339861 SMC2O95347 1197 aa13.11□□□□□ -0.31
SEMA4D-201ENST00000339861 HAND2P61296 217 aa13.11□□□□□ -0.31
SEMA4D-201ENST00000339861 ANKRD24Q8TF21 1146 aa13.11□□□□□ -0.31
SEMA4D-201ENST00000339861 XAGE3Q8WTP9 111 aa13.11□□□□□ -0.31
SEMA4D-201ENST00000339861 MLH3Q9UHC1 1453 aa13.11□□□□□ -0.31
SEMA4D-201ENST00000339861 PTH1RQ03431 593 aa13.11□□□□□ -0.31
SEMA4D-201ENST00000339861 SYNE3Q6ZMZ3 975 aa13.11□□□□□ -0.31
SEMA4D-201ENST00000339861 NFXL1Q6ZNB6 911 aa13.11□□□□□ -0.31
SEMA4D-201ENST00000339861 MAP3K5Q99683 1374 aa13.11□□□□□ -0.31
SEMA4D-201ENST00000339861 ADGRB3O60242 1522 aa13.11□□□□□ -0.31
SEMA4D-201ENST00000339861 GOLIM4O00461 696 aa13.11□□□□□ -0.31
SEMA4D-201ENST00000339861 EVA1CP58658 441 aa13.11□□□□□ -0.31
SEMA4D-201ENST00000339861 BRF1Q92994 677 aa13.11□□□□□ -0.31
SEMA4D-201ENST00000339861 ROBO2Q9HCK4 1378 aa13.11□□□□□ -0.31
SEMA4D-201ENST00000339861 CCDC129Q6ZRS4 1044 aa13.1□□□□□ -0.31
SEMA4D-201ENST00000339861 BICC1Q9H694 974 aaKnown RBP13.1□□□□□ -0.31
SEMA4D-201ENST00000339861 NOL7Q9UMY1 257 aaKnown RBP13.1□□□□□ -0.31
SEMA4D-201ENST00000339861 TTC21AQ8NDW8 1320 aa13.1□□□□□ -0.31
SEMA4D-201ENST00000339861 GRM8O00222 908 aa13.1□□□□□ -0.31
SEMA4D-201ENST00000339861 TULP1O00294 542 aaPredicted RBP13.1□□□□□ -0.31
SEMA4D-201ENST00000339861 TPM4P67936 248 aa13.1□□□□□ -0.31
SEMA4D-201ENST00000339861 ANKRD1Q15327 319 aa13.1□□□□□ -0.31
SEMA4D-201ENST00000339861 PDCL3Q9H2J4 239 aa13.1□□□□□ -0.31
SEMA4D-201ENST00000339861 ZBTB3Q9H5J0 574 aa13.1□□□□□ -0.31
SEMA4D-201ENST00000339861 SH2B1Q9NRF2 756 aaPredicted RBP13.1□□□□□ -0.31
SEMA4D-201ENST00000339861 ZDHHC9Q9Y397 364 aa13.1□□□□□ -0.31
SEMA4D-201ENST00000339861 PRAMEF22A3QJZ6 481 aa13.1□□□□□ -0.31
SEMA4D-201ENST00000339861 SPDYE4A6NLX3 237 aa13.1□□□□□ -0.31
SEMA4D-201ENST00000339861 NOLC1Q14978 699 aaKnown RBP eCLIP13.1□□□□□ -0.31
SEMA4D-201ENST00000339861 STK38Q15208 465 aa13.1□□□□□ -0.31
SEMA4D-201ENST00000339861 ISM2Q6H9L7 571 aa13.1□□□□□ -0.31
SEMA4D-201ENST00000339861 CABLES1Q8TDN4 633 aa13.1□□□□□ -0.31
SEMA4D-201ENST00000339861 PTCH1Q13635 1447 aa13.1□□□□□ -0.31
SEMA4D-201ENST00000339861 CREB3L3Q68CJ9 461 aa13.1□□□□□ -0.31
SEMA4D-201ENST00000339861 LARP1Q6PKG0 1096 aaKnown RBP13.1□□□□□ -0.31
SEMA4D-201ENST00000339861 LUZP1Q86V48 1076 aa13.1□□□□□ -0.31
SEMA4D-201ENST00000339861 ANKLE2Q86XL3 938 aa13.1□□□□□ -0.31
SEMA4D-201ENST00000339861 INTS4Q96HW7 963 aaKnown RBP13.1□□□□□ -0.31
SEMA4D-201ENST00000339861 TRMT1Q9NXH9 659 aaKnown RBP13.1□□□□□ -0.31
SEMA4D-201ENST00000339861 ATF3P18847 181 aa13.09□□□□□ -0.31
SEMA4D-201ENST00000339861 HMGN5P82970 282 aaKnown RBP13.09□□□□□ -0.31
SEMA4D-201ENST00000339861 ADCK5Q3MIX3 580 aa13.09□□□□□ -0.31
SEMA4D-201ENST00000339861 PNPLA6Q8IY17 1366 aa13.09□□□□□ -0.31
SEMA4D-201ENST00000339861 NLRP1Q9C000 1473 aa13.09□□□□□ -0.31
SEMA4D-201ENST00000339861 TRDNQ13061 729 aa13.09□□□□□ -0.31
SEMA4D-201ENST00000339861 CHMP4CQ96CF2 233 aa13.09□□□□□ -0.31
SEMA4D-201ENST00000339861 BIN1O00499 593 aa13.09□□□□□ -0.31
SEMA4D-201ENST00000339861 NFATC2IPQ8NCF5 419 aa13.09□□□□□ -0.31
SEMA4D-201ENST00000339861 HSPA4P34932 840 aa13.08□□□□□ -0.31
SEMA4D-201ENST00000339861 PROSER3Q2NL68 480 aa13.08□□□□□ -0.31
SEMA4D-201ENST00000339861 RRP12Q5JTH9 1297 aaKnown RBP13.08□□□□□ -0.31
SEMA4D-201ENST00000339861 KSR2Q6VAB6 950 aa13.08□□□□□ -0.31
SEMA4D-201ENST00000339861 ZNF771Q7L3S4 317 aaPredicted RBP13.08□□□□□ -0.31
SEMA4D-201ENST00000339861 HSP90AB3PQ58FF7 597 aa13.08□□□□□ -0.32
SEMA4D-201ENST00000339861 FAM177A1Q8N128 213 aaPredicted RBP13.08□□□□□ -0.32
SEMA4D-201ENST00000339861 KCNH5Q8NCM2 988 aa13.08□□□□□ -0.32
SEMA4D-201ENST00000339861 KIAA0232Q92628 1395 aa13.08□□□□□ -0.32
SEMA4D-201ENST00000339861 PPP1R9BQ96SB3 815 aa13.08□□□□□ -0.32
SEMA4D-201ENST00000339861 ANO6Q4KMQ2 910 aa13.08□□□□□ -0.32
SEMA4D-201ENST00000339861 CCDC186Q7Z3E2 898 aa13.08□□□□□ -0.32
SEMA4D-201ENST00000339861 ZNF165P49910 485 aa13.08□□□□□ -0.32
SEMA4D-201ENST00000339861 RUFY3Q7L099 469 aa13.08□□□□□ -0.32
SEMA4D-201ENST00000339861 MAP7D2Q96T17 732 aa13.08□□□□□ -0.32
SEMA4D-201ENST00000339861 DNAJC25Q9H1X3 360 aa13.08□□□□□ -0.32
SEMA4D-201ENST00000339861 RAD50Q92878 1312 aa13.07□□□□□ -0.32
SEMA4D-201ENST00000339861 PLEKHG3A1L390 1219 aa13.07□□□□□ -0.32
SEMA4D-201ENST00000339861 POLR3DP05423 398 aaPredicted RBP13.07□□□□□ -0.32
SEMA4D-201ENST00000339861 HYPKQ9NX55 129 aa13.07□□□□□ -0.32
SEMA4D-201ENST00000339861 KAT6BQ8WYB5 2073 aa13.07□□□□□ -0.32
SEMA4D-201ENST00000339861 SBNO1A3KN83 1393 aa13.07□□□□□ -0.32
SEMA4D-201ENST00000339861 LARGE1O95461 756 aa13.07□□□□□ -0.32
SEMA4D-201ENST00000339861 CCDC82Q8N4S0 544 aa13.07□□□□□ -0.32
SEMA4D-201ENST00000339861 NEK1Q96PY6 1258 aa13.07□□□□□ -0.32
SEMA4D-201ENST00000339861 IGSF3O75054 1194 aa13.06□□□□□ -0.32
SEMA4D-201ENST00000339861 PTGS1P23219 599 aa13.06□□□□□ -0.32
SEMA4D-201ENST00000339861 SUCLG2Q96I99 432 aa13.06□□□□□ -0.32
SEMA4D-201ENST00000339861 ORAI2Q96SN7 254 aa13.06□□□□□ -0.32
SEMA4D-201ENST00000339861 SCAND2PQ9GZW5 306 aaPredicted RBP13.06□□□□□ -0.32
SEMA4D-201ENST00000339861 AMOTQ4VCS5 1084 aa13.06□□□□□ -0.32
SEMA4D-201ENST00000339861 TTC39AQ5SRH9 613 aa13.06□□□□□ -0.32
SEMA4D-201ENST00000339861 TOM1L2Q6ZVM7 507 aa13.06□□□□□ -0.32
SEMA4D-201ENST00000339861 SSH3Q8TE77 659 aa13.06□□□□□ -0.32
SEMA4D-201ENST00000339861 PES1O00541 588 aaKnown RBP13.06□□□□□ -0.32
SEMA4D-201ENST00000339861 EIF4A1P60842 406 aaKnown RBP13.06□□□□□ -0.32
SEMA4D-201ENST00000339861 ANKRD13DQ6ZTN6 518 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms