RNA–Protein interactions for RNA: ENST00000328863.8

CLRN1-203, Transcript of clarin 1, humanhuman

TSL 1 (best) BASIC

Gene CLRN1, Length 738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-203ENST00000328863 CHMP4AQ9BY43 222 aa19.2■□□□□ 0.66
CLRN1-203ENST00000328863 MAP3K15Q6ZN16 1313 aa19.2■□□□□ 0.66
CLRN1-203ENST00000328863 ANKRD31Q8N7Z5 1873 aa19.2■□□□□ 0.66
CLRN1-203ENST00000328863 CHD4Q14839 1912 aa19.19■□□□□ 0.66
CLRN1-203ENST00000328863 ARFGEF2Q9Y6D5 1785 aa19.19■□□□□ 0.66
CLRN1-203ENST00000328863 COL11A2P13942 1736 aaPredicted RBP19.18■□□□□ 0.66
CLRN1-203ENST00000328863 NPHP1O15259 732 aa19.18■□□□□ 0.66
CLRN1-203ENST00000328863 SERPINB2P05120 415 aa19.18■□□□□ 0.66
CLRN1-203ENST00000328863 TGFB2P61812 414 aa19.18■□□□□ 0.66
CLRN1-203ENST00000328863 PELP1Q8IZL8 1130 aaKnown RBP19.18■□□□□ 0.66
CLRN1-203ENST00000328863 NECTIN2Q92692 538 aa19.18■□□□□ 0.66
CLRN1-203ENST00000328863 TSR2Q969E8 191 aaKnown RBP19.18■□□□□ 0.66
CLRN1-203ENST00000328863 SETDB2Q96T68 719 aa19.18■□□□□ 0.66
CLRN1-203ENST00000328863 DDX21Q9NR30 783 aaKnown RBP eCLIP19.18■□□□□ 0.66
CLRN1-203ENST00000328863 FANCIQ9NVI1 1328 aa19.18■□□□□ 0.66
CLRN1-203ENST00000328863 ARFGEF1Q9Y6D6 1849 aa19.17■□□□□ 0.66
CLRN1-203ENST00000328863 ERVV-1B6SEH8 477 aa19.17■□□□□ 0.66
CLRN1-203ENST00000328863 CHPF2Q9P2E5 772 aa19.17■□□□□ 0.66
CLRN1-203ENST00000328863 DBF4Q9UBU7 674 aaPredicted RBP19.17■□□□□ 0.66
CLRN1-203ENST00000328863 GOLGB1Q14789 3259 aaKnown RBP19.16■□□□□ 0.66
CLRN1-203ENST00000328863 CACNA1FO60840 1977 aa19.16■□□□□ 0.66
CLRN1-203ENST00000328863 PDIA6Q15084 440 aa19.16■□□□□ 0.66
CLRN1-203ENST00000328863 GPR162Q16538 588 aa19.16■□□□□ 0.66
CLRN1-203ENST00000328863 PROSER3Q2NL68 480 aa19.16■□□□□ 0.66
CLRN1-203ENST00000328863 CNBD1Q8NA66 436 aa19.16■□□□□ 0.66
CLRN1-203ENST00000328863 IBTKQ9P2D0 1353 aaPredicted RBP19.16■□□□□ 0.66
CLRN1-203ENST00000328863 ANXA1P04083 346 aa19.15■□□□□ 0.66
CLRN1-203ENST00000328863 ST5P78524 1137 aa19.15■□□□□ 0.66
CLRN1-203ENST00000328863 TTLL7Q6ZT98 887 aa19.15■□□□□ 0.66
CLRN1-203ENST00000328863 LRP10Q7Z4F1 713 aa19.15■□□□□ 0.66
CLRN1-203ENST00000328863 ZBTB3Q9H5J0 574 aa19.15■□□□□ 0.66
CLRN1-203ENST00000328863 MYH16Q9H6N6 1097 aa19.15■□□□□ 0.66
CLRN1-203ENST00000328863 NIP7Q9Y221 180 aaKnown RBP eCLIP19.15■□□□□ 0.66
CLRN1-203ENST00000328863 UTRNP46939 3433 aa19.13■□□□□ 0.65
CLRN1-203ENST00000328863 CCDC30Q5VVM6 783 aa19.13■□□□□ 0.65
CLRN1-203ENST00000328863 NBPF5PQ86XG9 351 aaPredicted RBP19.13■□□□□ 0.65
CLRN1-203ENST00000328863 HYPKQ9NX55 129 aa19.13■□□□□ 0.65
CLRN1-203ENST00000328863 CACNA1SQ13698 1873 aa19.12■□□□□ 0.65
CLRN1-203ENST00000328863 ZNF521Q96K83 1311 aa19.12■□□□□ 0.65
CLRN1-203ENST00000328863 ELL2O00472 640 aaPredicted RBP19.12■□□□□ 0.65
CLRN1-203ENST00000328863 GOLGA2Q08379 1002 aa19.12■□□□□ 0.65
CLRN1-203ENST00000328863 HLFQ16534 295 aa19.12■□□□□ 0.65
CLRN1-203ENST00000328863 TWISTNBQ3B726 338 aaPredicted RBP19.12■□□□□ 0.65
CLRN1-203ENST00000328863 HSP90AB3PQ58FF7 597 aa19.12■□□□□ 0.65
CLRN1-203ENST00000328863 PRR5LQ6MZQ0 368 aa19.12■□□□□ 0.65
CLRN1-203ENST00000328863 MIER1Q8N108 512 aa19.12■□□□□ 0.65
CLRN1-203ENST00000328863 C8orf58Q8NAV2 365 aa19.12■□□□□ 0.65
CLRN1-203ENST00000328863 XAGE3Q8WTP9 111 aa19.12■□□□□ 0.65
CLRN1-203ENST00000328863 TNRC6CQ9HCJ0 1690 aaKnown RBP19.11■□□□□ 0.65
CLRN1-203ENST00000328863 AIMP1Q12904 312 aaKnown RBP19.11■□□□□ 0.65
CLRN1-203ENST00000328863 GIGYF2Q6Y7W6 1299 aaKnown RBP19.11■□□□□ 0.65
CLRN1-203ENST00000328863 COPS6Q7L5N1 327 aa19.11■□□□□ 0.65
CLRN1-203ENST00000328863 STK31Q9BXU1 1019 aa19.11■□□□□ 0.65
CLRN1-203ENST00000328863 NYXQ9GZU5 481 aa19.11■□□□□ 0.65
CLRN1-203ENST00000328863 GRIN3BO60391 1043 aa19.1■□□□□ 0.65
CLRN1-203ENST00000328863 DPEP1P16444 411 aa19.1■□□□□ 0.65
CLRN1-203ENST00000328863 PDZRN3Q9UPQ7 1066 aa19.1■□□□□ 0.65
CLRN1-203ENST00000328863 YBX3P16989 372 aaKnown RBP eCLIP19.09■□□□□ 0.65
CLRN1-203ENST00000328863 PDE6BP35913 854 aa19.09■□□□□ 0.65
CLRN1-203ENST00000328863 TSPYL6Q8N831 410 aa19.09■□□□□ 0.65
CLRN1-203ENST00000328863 WWC3Q9ULE0 1092 aa19.09■□□□□ 0.65
CLRN1-203ENST00000328863 LAMB2P55268 1798 aa19.09■□□□□ 0.65
CLRN1-203ENST00000328863 RIC1Q4ADV7 1423 aa19.08■□□□□ 0.65
CLRN1-203ENST00000328863 A0A0G2JLW4 131 aa19.08■□□□□ 0.64
CLRN1-203ENST00000328863 GPTP24298 496 aa19.08■□□□□ 0.64
CLRN1-203ENST00000328863 PARP10Q53GL7 1025 aa19.08■□□□□ 0.64
CLRN1-203ENST00000328863 TPTE2Q6XPS3 522 aa19.08■□□□□ 0.64
CLRN1-203ENST00000328863 BRIP1Q9BX63 1249 aa19.08■□□□□ 0.64
CLRN1-203ENST00000328863 UBN2Q6ZU65 1347 aa19.07■□□□□ 0.64
CLRN1-203ENST00000328863 GTF2E1P29083 439 aaPredicted RBP19.07■□□□□ 0.64
CLRN1-203ENST00000328863 PLBD2Q8NHP8 589 aa19.07■□□□□ 0.64
CLRN1-203ENST00000328863 PIM2Q9P1W9 311 aa19.07■□□□□ 0.64
CLRN1-203ENST00000328863 BCS1LQ9Y276 419 aa19.07■□□□□ 0.64
CLRN1-203ENST00000328863 RNF123Q5XPI4 1314 aa19.06■□□□□ 0.64
CLRN1-203ENST00000328863 FAM177BA6PVY3 158 aa19.06■□□□□ 0.64
CLRN1-203ENST00000328863 E9PSI1 815 aa19.06■□□□□ 0.64
CLRN1-203ENST00000328863 H0YIN7 160 aa19.06■□□□□ 0.64
CLRN1-203ENST00000328863 DDX58O95786 925 aaKnown RBP19.06■□□□□ 0.64
CLRN1-203ENST00000328863 CHRNA5P30532 468 aa19.06■□□□□ 0.64
CLRN1-203ENST00000328863 C2CD5Q86YS7 1000 aa19.06■□□□□ 0.64
CLRN1-203ENST00000328863 ABCC12Q96J65 1359 aa19.06■□□□□ 0.64
CLRN1-203ENST00000328863 EXOSC9Q06265 439 aaKnown RBP19.05■□□□□ 0.64
CLRN1-203ENST00000328863 DALRD3Q5D0E6 543 aaKnown RBP19.05■□□□□ 0.64
CLRN1-203ENST00000328863 PPP1R42Q7Z4L9 355 aa19.05■□□□□ 0.64
CLRN1-203ENST00000328863 ZNF34Q8IZ26 560 aa19.05■□□□□ 0.64
CLRN1-203ENST00000328863 SPINK5Q9NQ38 1064 aaPredicted RBP19.05■□□□□ 0.64
CLRN1-203ENST00000328863 ANKRD13DQ6ZTN6 518 aa19.04■□□□□ 0.64
CLRN1-203ENST00000328863 CCDC24Q8N4L8 307 aa19.04■□□□□ 0.64
CLRN1-203ENST00000328863 RIC3Q7Z5B4 369 aa19.03■□□□□ 0.64
CLRN1-203ENST00000328863 NTSR2O95665 410 aa19.02■□□□□ 0.64
CLRN1-203ENST00000328863 KCNA3P22001 575 aa19.02■□□□□ 0.64
CLRN1-203ENST00000328863 TCIRG1Q13488 830 aa19.02■□□□□ 0.64
CLRN1-203ENST00000328863 PHAXQ9H814 394 aaKnown RBP19.02■□□□□ 0.64
CLRN1-203ENST00000328863 DDX60Q8IY21 1712 aaKnown RBP19.02■□□□□ 0.63
CLRN1-203ENST00000328863 SUSD4Q5VX71 490 aa19.01■□□□□ 0.63
CLRN1-203ENST00000328863 NUTM1Q86Y26 1132 aa19.01■□□□□ 0.63
CLRN1-203ENST00000328863 UTP14AQ9BVJ6 771 aaKnown RBP19.01■□□□□ 0.63
CLRN1-203ENST00000328863 YY1P25490 414 aa19■□□□□ 0.63
CLRN1-203ENST00000328863 STYK1Q6J9G0 422 aa19■□□□□ 0.63
CLRN1-203ENST00000328863 NLRP10Q86W26 655 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms