RNA–Protein interactions for RNA: ENST00000273179.9

CTDSPL-201, Transcript of CTD small phosphatase like, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-201ENST00000273179 CCDC191Q8NCU4 936 aa10.37□□□□□ -0.75
CTDSPL-201ENST00000273179 ZC3H15Q8WU90 426 aaKnown RBP10.37□□□□□ -0.75
CTDSPL-201ENST00000273179 TMEM165Q9HC07 324 aa10.37□□□□□ -0.75
CTDSPL-201ENST00000273179 GNL3LQ9NVN8 582 aaKnown RBP10.37□□□□□ -0.75
CTDSPL-201ENST00000273179 BRD3Q15059 726 aa10.37□□□□□ -0.75
CTDSPL-201ENST00000273179 PMFBP1Q8TBY8 1022 aa10.37□□□□□ -0.75
CTDSPL-201ENST00000273179 SMC5Q8IY18 1101 aa10.37□□□□□ -0.75
CTDSPL-201ENST00000273179 BHMTQ93088 406 aa10.37□□□□□ -0.75
CTDSPL-201ENST00000273179 CARD11Q9BXL7 1154 aa10.37□□□□□ -0.75
CTDSPL-201ENST00000273179 NACA2Q9H009 215 aa10.37□□□□□ -0.75
CTDSPL-201ENST00000273179 TRMT1Q9NXH9 659 aaKnown RBP10.37□□□□□ -0.75
CTDSPL-201ENST00000273179 KRI1Q8N9T8 703 aaKnown RBP10.37□□□□□ -0.75
CTDSPL-201ENST00000273179 L3MBTL2Q969R5 705 aa10.37□□□□□ -0.75
CTDSPL-201ENST00000273179 MRRFQ96E11 262 aaKnown RBP10.37□□□□□ -0.75
CTDSPL-201ENST00000273179 IWS1Q96ST2 819 aa10.37□□□□□ -0.75
CTDSPL-201ENST00000273179 CWC25Q9NXE8 425 aaPredicted RBP10.37□□□□□ -0.75
CTDSPL-201ENST00000273179 IP6K2Q9UHH9 426 aa10.37□□□□□ -0.75
CTDSPL-201ENST00000273179 TSPY2A6NKD2 308 aa10.36□□□□□ -0.75
CTDSPL-201ENST00000273179 TSPY3P0CV98 308 aa10.36□□□□□ -0.75
CTDSPL-201ENST00000273179 TSPY8P0CW00 308 aa10.36□□□□□ -0.75
CTDSPL-201ENST00000273179 TSPY1Q01534 308 aa10.36□□□□□ -0.75
CTDSPL-201ENST00000273179 CDC37Q16543 378 aaPredicted RBP10.36□□□□□ -0.75
CTDSPL-201ENST00000273179 TMEM110Q86TL2 294 aa10.36□□□□□ -0.75
CTDSPL-201ENST00000273179 RPS6KC1Q96S38 1066 aa10.36□□□□□ -0.75
CTDSPL-201ENST00000273179 SFMBT1Q9UHJ3 866 aa10.36□□□□□ -0.75
CTDSPL-201ENST00000273179 ARHGEF11O15085 1522 aa10.36□□□□□ -0.75
CTDSPL-201ENST00000273179 FAM200BP0CF97 657 aa10.36□□□□□ -0.75
CTDSPL-201ENST00000273179 LZTS2Q9BRK4 669 aa10.36□□□□□ -0.75
CTDSPL-201ENST00000273179 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.36□□□□□ -0.75
CTDSPL-201ENST00000273179 RAPGEF6Q8TEU7 1601 aa10.36□□□□□ -0.75
CTDSPL-201ENST00000273179 PABPN1LA6NDY0 278 aaKnown RBP10.36□□□□□ -0.75
CTDSPL-201ENST00000273179 HIP1RO75146 1068 aa10.36□□□□□ -0.75
CTDSPL-201ENST00000273179 BDNFP23560 247 aa10.36□□□□□ -0.75
CTDSPL-201ENST00000273179 HDGFL2Q7Z4V5 671 aaPredicted RBP10.36□□□□□ -0.75
CTDSPL-201ENST00000273179 USP33Q8TEY7 942 aa10.36□□□□□ -0.75
CTDSPL-201ENST00000273179 ABCC5O15440 1437 aa10.36□□□□□ -0.75
CTDSPL-201ENST00000273179 VASPP50552 380 aaPredicted RBP10.35□□□□□ -0.75
CTDSPL-201ENST00000273179 WDR43Q15061 677 aaKnown RBP eCLIP10.35□□□□□ -0.75
CTDSPL-201ENST00000273179 MAP7D1Q3KQU3 841 aa10.35□□□□□ -0.75
CTDSPL-201ENST00000273179 AKNAD1Q5T1N1 836 aa10.35□□□□□ -0.75
CTDSPL-201ENST00000273179 DENND4BO75064 1496 aaPredicted RBP10.35□□□□□ -0.75
CTDSPL-201ENST00000273179 PARNO95453 639 aaKnown RBP10.35□□□□□ -0.75
CTDSPL-201ENST00000273179 KIF14Q15058 1648 aa10.35□□□□□ -0.75
CTDSPL-201ENST00000273179 U2AF2P26368 475 aaKnown RBP eCLIP10.35□□□□□ -0.752e-7■□□□□ 9.7
CTDSPL-201ENST00000273179 BIRC3Q13489 604 aa10.35□□□□□ -0.75
CTDSPL-201ENST00000273179 GBP7Q8N8V2 638 aaPredicted RBP10.35□□□□□ -0.75
CTDSPL-201ENST00000273179 ARMC2Q8NEN0 867 aa10.35□□□□□ -0.75
CTDSPL-201ENST00000273179 DAPK1P53355 1430 aa10.34□□□□□ -0.75
CTDSPL-201ENST00000273179 CARNS1A5YM72 827 aa10.34□□□□□ -0.75
CTDSPL-201ENST00000273179 FCHSD2O94868 740 aa10.34□□□□□ -0.75
CTDSPL-201ENST00000273179 ERCC5P28715 1186 aaPredicted RBP10.34□□□□□ -0.75
CTDSPL-201ENST00000273179 NUTM1Q86Y26 1132 aa10.34□□□□□ -0.75
CTDSPL-201ENST00000273179 TBC1D22AQ8WUA7 517 aa10.34□□□□□ -0.75
CTDSPL-201ENST00000273179 THRAP3Q9Y2W1 955 aaKnown RBP10.34□□□□□ -0.75
CTDSPL-201ENST00000273179 IL16Q14005 1332 aa10.34□□□□□ -0.75
CTDSPL-201ENST00000273179 MSL3P1P0C860 447 aa10.34□□□□□ -0.75
CTDSPL-201ENST00000273179 DMPKQ09013 629 aa10.34□□□□□ -0.75
CTDSPL-201ENST00000273179 RAD51AP2Q09MP3 1159 aa10.34□□□□□ -0.75
CTDSPL-201ENST00000273179 FKBP15Q5T1M5 1219 aa10.34□□□□□ -0.75
CTDSPL-201ENST00000273179 DZIP3Q86Y13 1208 aaKnown RBP10.34□□□□□ -0.75
CTDSPL-201ENST00000273179 WDR63Q8IWG1 891 aa10.34□□□□□ -0.75
CTDSPL-201ENST00000273179 THOC1Q96FV9 657 aaKnown RBP10.34□□□□□ -0.75
CTDSPL-201ENST00000273179 PRIMPOLQ96LW4 560 aa10.34□□□□□ -0.75
CTDSPL-201ENST00000273179 SCLT1Q96NL6 688 aa10.34□□□□□ -0.75
CTDSPL-201ENST00000273179 TRIM4Q9C037 500 aa10.34□□□□□ -0.75
CTDSPL-201ENST00000273179 SEL1LQ9UBV2 794 aa10.34□□□□□ -0.75
CTDSPL-201ENST00000273179 UNCXA6NJT0 531 aa10.34□□□□□ -0.75
CTDSPL-201ENST00000273179 ATP2B1P20020 1258 aa10.34□□□□□ -0.75
CTDSPL-201ENST00000273179 TPM4P67936 248 aa10.34□□□□□ -0.75
CTDSPL-201ENST00000273179 RRP12Q5JTH9 1297 aaKnown RBP10.34□□□□□ -0.75
CTDSPL-201ENST00000273179 CFAP58Q5T655 872 aa10.34□□□□□ -0.75
CTDSPL-201ENST00000273179 FAAH2Q6GMR7 532 aa10.34□□□□□ -0.75
CTDSPL-201ENST00000273179 CDC37L1Q7L3B6 337 aa10.34□□□□□ -0.75
CTDSPL-201ENST00000273179 GBP2P32456 591 aaPredicted RBP10.33□□□□□ -0.76
CTDSPL-201ENST00000273179 MAGEA8P43361 318 aa10.33□□□□□ -0.76
CTDSPL-201ENST00000273179 IFT88Q13099 833 aa10.33□□□□□ -0.76
CTDSPL-201ENST00000273179 KIAA0825Q8IV33 1275 aa10.33□□□□□ -0.76
CTDSPL-201ENST00000273179 CHPF2Q9P2E5 772 aa10.33□□□□□ -0.76
CTDSPL-201ENST00000273179 TMCC3Q9ULS5 477 aa10.33□□□□□ -0.76
CTDSPL-201ENST00000273179 RLBP1P12271 317 aa10.33□□□□□ -0.76
CTDSPL-201ENST00000273179 MSL1Q68DK7 614 aa10.33□□□□□ -0.76
CTDSPL-201ENST00000273179 KLF15Q9UIH9 416 aa10.33□□□□□ -0.76
CTDSPL-201ENST00000273179 PTPRGP23470 1445 aa10.33□□□□□ -0.76
CTDSPL-201ENST00000273179 MIA2Q96PC5 1412 aa10.33□□□□□ -0.76
CTDSPL-201ENST00000273179 MATR3P43243 847 aaKnown RBP eCLIP10.33□□□□□ -0.762e-6■■■□□ 18.7
CTDSPL-201ENST00000273179 TMA7Q9Y2S6 64 aaKnown RBP10.33□□□□□ -0.76
CTDSPL-201ENST00000273179 U3KPZ7 1027 aaPredicted RBP10.33□□□□□ -0.76
CTDSPL-201ENST00000273179 NUP160Q12769 1436 aa10.33□□□□□ -0.76
CTDSPL-201ENST00000273179 GOLGA2Q08379 1002 aa10.33□□□□□ -0.76
CTDSPL-201ENST00000273179 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.33□□□□□ -0.769e-12■■■■■ 142.3
CTDSPL-201ENST00000273179 CCDC114Q96M63 670 aa10.33□□□□□ -0.76
CTDSPL-201ENST00000273179 NOL7Q9UMY1 257 aaKnown RBP10.33□□□□□ -0.76
CTDSPL-201ENST00000273179 NOLC1Q14978 699 aaKnown RBP eCLIP10.32□□□□□ -0.76
CTDSPL-201ENST00000273179 SEPT2Q15019 361 aa10.32□□□□□ -0.76
CTDSPL-201ENST00000273179 SEPT7Q16181 437 aaKnown RBP10.32□□□□□ -0.76
CTDSPL-201ENST00000273179 KIF4BQ2VIQ3 1234 aa10.32□□□□□ -0.76
CTDSPL-201ENST00000273179 NAA16Q6N069 864 aaPredicted RBP10.32□□□□□ -0.76
CTDSPL-201ENST00000273179 SENP3-EIF4A1A0A087X0R7 540 aa10.32□□□□□ -0.76
CTDSPL-201ENST00000273179 SYCP1Q15431 976 aa10.32□□□□□ -0.76
CTDSPL-201ENST00000273179 OLFML1Q6UWY5 402 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms