RNA–Protein interactions for RNA: ENSMUST00000225319.1

Ssr1-204, Transcript of Translocon-associated protein subunit alpha, mousemouse

BASIC

Gene Ssr1, Length 1,610 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-204ENSMUST00000225319 Sos2Q02384 1333 aa17.61■□□□□ 0.41
Ssr1-204ENSMUST00000225319 Arap2Q8BZ05 1703 aa17.61■□□□□ 0.41
Ssr1-204ENSMUST00000225319 Irx3P81067 507 aa17.61■□□□□ 0.41
Ssr1-204ENSMUST00000225319 Fnbp4Q6ZQ03 1031 aa17.61■□□□□ 0.41
Ssr1-204ENSMUST00000225319 AbraQ8BUZ1 375 aa17.61■□□□□ 0.41
Ssr1-204ENSMUST00000225319 Kif2cQ922S8 721 aa17.61■□□□□ 0.41
Ssr1-204ENSMUST00000225319 Kiaa0232Q80U59 1396 aaKnown RBP17.6■□□□□ 0.41
Ssr1-204ENSMUST00000225319 Map3k13Q1HKZ5 959 aa17.6■□□□□ 0.41
Ssr1-204ENSMUST00000225319 Rps6ka4Q9Z2B9 773 aa17.6■□□□□ 0.41
Ssr1-204ENSMUST00000225319 ArxO35085 564 aa17.59■□□□□ 0.41
Ssr1-204ENSMUST00000225319 Ehd4Q9EQP2 541 aa17.59■□□□□ 0.41
Ssr1-204ENSMUST00000225319 AK157302I3ITR1 129 aa17.58■□□□□ 0.41
Ssr1-204ENSMUST00000225319 Hspa2P17156 633 aa17.58■□□□□ 0.41
Ssr1-204ENSMUST00000225319 Nlrp9bQ66X22 1003 aa17.58■□□□□ 0.41
Ssr1-204ENSMUST00000225319 Isca1Q9D924 129 aa17.58■□□□□ 0.41
Ssr1-204ENSMUST00000225319 VgfQ0VGU4 617 aa17.58■□□□□ 0.4
Ssr1-204ENSMUST00000225319 Tgfb1i1Q62219 461 aa17.58■□□□□ 0.4
Ssr1-204ENSMUST00000225319 Fkbp5Q64378 456 aa17.58■□□□□ 0.4
Ssr1-204ENSMUST00000225319 Gnl3lQ6PGG6 577 aaKnown RBP17.58■□□□□ 0.4
Ssr1-204ENSMUST00000225319 Gm10093D3YYI8 482 aa17.57■□□□□ 0.4
Ssr1-204ENSMUST00000225319 Hdac1O09106 482 aaKnown RBP17.57■□□□□ 0.4
Ssr1-204ENSMUST00000225319 Smarca5Q91ZW3 1051 aaKnown RBP17.57■□□□□ 0.4
Ssr1-204ENSMUST00000225319 Abcc4E9Q236 1325 aa17.56■□□□□ 0.4
Ssr1-204ENSMUST00000225319 InsrrQ9WTL4 1300 aa17.56■□□□□ 0.4
Ssr1-204ENSMUST00000225319 4930523C07RikE9Q2T4 99 aa17.56■□□□□ 0.4
Ssr1-204ENSMUST00000225319 Cyp46a1Q9WVK8 500 aa17.56■□□□□ 0.4
Ssr1-204ENSMUST00000225319 Ccdc146E9Q9F7 977 aa17.55■□□□□ 0.4
Ssr1-204ENSMUST00000225319 Terf2O35144 541 aa17.54■□□□□ 0.4
Ssr1-204ENSMUST00000225319 Soga3Q6NZL0 945 aa17.54■□□□□ 0.4
Ssr1-204ENSMUST00000225319 Sgsm1Q8BPQ7 1093 aa17.54■□□□□ 0.4
Ssr1-204ENSMUST00000225319 Klc3Q91W40 508 aa17.54■□□□□ 0.4
Ssr1-204ENSMUST00000225319 Ltb4r2Q9JJL9 360 aa17.54■□□□□ 0.4
Ssr1-204ENSMUST00000225319 Lama4P97927 1816 aa17.54■□□□□ 0.4
Ssr1-204ENSMUST00000225319 GakQ99KY4 1305 aa17.54■□□□□ 0.4
Ssr1-204ENSMUST00000225319 Prr29B1ARI9 187 aa17.54■□□□□ 0.4
Ssr1-204ENSMUST00000225319 Cct4P80315 539 aaKnown RBP17.53■□□□□ 0.4
Ssr1-204ENSMUST00000225319 Gnat3Q3V3I2 354 aa17.53■□□□□ 0.4
Ssr1-204ENSMUST00000225319 Slc4a10Q5DTL9 1118 aa17.53■□□□□ 0.4
Ssr1-204ENSMUST00000225319 Clcn1Q64347 994 aa17.53■□□□□ 0.4
Ssr1-204ENSMUST00000225319 Cypt2Q6P924 180 aa17.53■□□□□ 0.4
Ssr1-204ENSMUST00000225319 Nip7Q9CXK8 180 aaKnown RBP17.53■□□□□ 0.4
Ssr1-204ENSMUST00000225319 Antxr1Q9CZ52 562 aa17.53■□□□□ 0.4
Ssr1-204ENSMUST00000225319 CenppQ9CZ92 286 aa17.53■□□□□ 0.4
Ssr1-204ENSMUST00000225319 Cwc25Q9DBF7 416 aa17.53■□□□□ 0.4
Ssr1-204ENSMUST00000225319 Stard3nlQ9DCI3 235 aa17.53■□□□□ 0.4
Ssr1-204ENSMUST00000225319 Ssc5dQ8BV57 1371 aa17.53■□□□□ 0.4
Ssr1-204ENSMUST00000225319 Ly75Q60767 1723 aa17.53■□□□□ 0.4
Ssr1-204ENSMUST00000225319 NmiO35309 314 aa17.52■□□□□ 0.4
Ssr1-204ENSMUST00000225319 Zbtb1Q91VL9 713 aa17.52■□□□□ 0.4
Ssr1-204ENSMUST00000225319 Greb1lB9EJV3 1913 aa17.52■□□□□ 0.39
Ssr1-204ENSMUST00000225319 Catsper2A2ARP9 588 aa17.51■□□□□ 0.39
Ssr1-204ENSMUST00000225319 Anapc15-psA0A140T8L6 141 aa17.5■□□□□ 0.39
Ssr1-204ENSMUST00000225319 Myd88P22366 296 aa17.5■□□□□ 0.39
Ssr1-204ENSMUST00000225319 Taok3Q8BYC6 898 aa17.5■□□□□ 0.39
Ssr1-204ENSMUST00000225319 C4bP01029 1738 aa17.5■□□□□ 0.39
Ssr1-204ENSMUST00000225319 Fkbp1aP26883 108 aaKnown RBP17.5■□□□□ 0.39
Ssr1-204ENSMUST00000225319 Gtf3c3Q3TMP1 882 aa17.5■□□□□ 0.39
Ssr1-204ENSMUST00000225319 Tbc1d9Q3UYK3 1264 aa17.5■□□□□ 0.39
Ssr1-204ENSMUST00000225319 Bsdc1Q80Y55 427 aa17.5■□□□□ 0.39
Ssr1-204ENSMUST00000225319 Tmem87bQ8BKU8 555 aa17.5■□□□□ 0.39
Ssr1-204ENSMUST00000225319 Afg3l2Q8JZQ2 802 aaKnown RBP17.5■□□□□ 0.39
Ssr1-204ENSMUST00000225319 Zkscan2G3X952 960 aa17.49■□□□□ 0.39
Ssr1-204ENSMUST00000225319 Fam213aQ9CYH2 218 aa17.49■□□□□ 0.39
Ssr1-204ENSMUST00000225319 AtrnQ9WU60 1428 aa17.49■□□□□ 0.39
Ssr1-204ENSMUST00000225319 Ankrd31A0A140LI88 1765 aa17.48■□□□□ 0.39
Ssr1-204ENSMUST00000225319 Zbtb3Q91X45 518 aa17.48■□□□□ 0.39
Ssr1-204ENSMUST00000225319 Prr5lA2AVJ5 370 aa17.47■□□□□ 0.39
Ssr1-204ENSMUST00000225319 Pa2g4P50580 394 aaKnown RBP17.47■□□□□ 0.39
Ssr1-204ENSMUST00000225319 GpkowQ56A08 488 aa17.47■□□□□ 0.39
Ssr1-204ENSMUST00000225319 Ptpdc1Q6NZK8 747 aa17.47■□□□□ 0.39
Ssr1-204ENSMUST00000225319 Ankib1Q6ZPS6 1085 aa17.47■□□□□ 0.39
Ssr1-204ENSMUST00000225319 Zcrb1Q9CZ96 217 aaKnown RBP17.47■□□□□ 0.39
Ssr1-204ENSMUST00000225319 4933402E13RikQ9D4D2 429 aa17.47■□□□□ 0.39
Ssr1-204ENSMUST00000225319 Nek4Q9Z1J2 792 aa17.47■□□□□ 0.39
Ssr1-204ENSMUST00000225319 Kiaa0319lQ8K135 1048 aa17.47■□□□□ 0.39
Ssr1-204ENSMUST00000225319 Nlrp3Q8R4B8 1033 aa17.47■□□□□ 0.39
Ssr1-204ENSMUST00000225319 Noc3lQ8VI84 807 aaKnown RBP17.47■□□□□ 0.39
Ssr1-204ENSMUST00000225319 Rapgef4Q9EQZ6 1011 aa17.47■□□□□ 0.39
Ssr1-204ENSMUST00000225319 Bcar3Q9QZK2 820 aa17.47■□□□□ 0.39
Ssr1-204ENSMUST00000225319 Ppfibp2O35711 882 aa17.45■□□□□ 0.38
Ssr1-204ENSMUST00000225319 Adora1Q60612 326 aa17.45■□□□□ 0.38
Ssr1-204ENSMUST00000225319 Lrit1Q8K099 624 aa17.45■□□□□ 0.38
Ssr1-204ENSMUST00000225319 Kdm4cQ8VCD7 1054 aa17.45■□□□□ 0.38
Ssr1-204ENSMUST00000225319 Plcb3P51432 1234 aaKnown RBP17.44■□□□□ 0.38
Ssr1-204ENSMUST00000225319 Smc4Q8CG47 1286 aa17.44■□□□□ 0.38
Ssr1-204ENSMUST00000225319 Myh1Q5SX40 1942 aa17.44■□□□□ 0.38
Ssr1-204ENSMUST00000225319 Prl3d2F6R3P9 224 aa17.43■□□□□ 0.38
Ssr1-204ENSMUST00000225319 1700010I14RikQ7TPG0 532 aa17.43■□□□□ 0.38
Ssr1-204ENSMUST00000225319 NexnQ7TPW1 607 aa17.43■□□□□ 0.38
Ssr1-204ENSMUST00000225319 Clca2Q8BG22 942 aa17.43■□□□□ 0.38
Ssr1-204ENSMUST00000225319 Miga2Q8BK03 593 aa17.43■□□□□ 0.38
Ssr1-204ENSMUST00000225319 Arhgap33Q80YF9 1305 aa17.43■□□□□ 0.38
Ssr1-204ENSMUST00000225319 Tpx2A2APB8 745 aaKnown RBP17.43■□□□□ 0.38
Ssr1-204ENSMUST00000225319 Pdia3P27773 505 aaKnown RBP17.43■□□□□ 0.38
Ssr1-204ENSMUST00000225319 Rsph3aQ3UFY4 516 aa17.43■□□□□ 0.38
Ssr1-204ENSMUST00000225319 Ppp6r3Q922D4 844 aa17.43■□□□□ 0.38
Ssr1-204ENSMUST00000225319 CoblQ5NBX1 1337 aaKnown RBP17.43■□□□□ 0.38
Ssr1-204ENSMUST00000225319 Prl3d3A0A0M6L0J6 224 aa17.42■□□□□ 0.38
Ssr1-204ENSMUST00000225319 Cyp19a1P28649 503 aa17.42■□□□□ 0.38
Ssr1-204ENSMUST00000225319 Nucb1Q02819 459 aaKnown RBP17.42■□□□□ 0.38
Retrieved 100 of 22,080 RNA–protein pairs in 11.5 ms