RNA–Protein interactions for RNA: ENSMUST00000223065.1

Trim27-207, Transcript of Zinc finger protein RFP, mousemouse

TSL 1 (best) BASIC

Gene Trim27, Length 2,046 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27-207ENSMUST00000223065 Mcm4P49717 862 aa25.74■■□□□ 1.71
Trim27-207ENSMUST00000223065 Trim52Q8CDV4 233 aa25.74■■□□□ 1.71
Trim27-207ENSMUST00000223065 Pde3bQ61409 1100 aa25.73■■□□□ 1.71
Trim27-207ENSMUST00000223065 Ms4a2P20490 235 aa25.73■■□□□ 1.71
Trim27-207ENSMUST00000223065 Ddx58Q6Q899 926 aa25.73■■□□□ 1.71
Trim27-207ENSMUST00000223065 Vwa3bJ9JI28 736 aa25.72■■□□□ 1.71
Trim27-207ENSMUST00000223065 Jakmip1Q8BVL9 626 aa25.71■■□□□ 1.71
Trim27-207ENSMUST00000223065 Tshz3Q8CGV9 1081 aa25.71■■□□□ 1.71
Trim27-207ENSMUST00000223065 Sf3a1Q8K4Z5 791 aaKnown RBP25.71■■□□□ 1.71
Trim27-207ENSMUST00000223065 Erbb4Q61527 1308 aa25.71■■□□□ 1.71
Trim27-207ENSMUST00000223065 Pard3Q99NH2 1333 aa25.71■■□□□ 1.71
Trim27-207ENSMUST00000223065 Edc3Q8K2D3 508 aaKnown RBP25.71■■□□□ 1.71
Trim27-207ENSMUST00000223065 Tiam2Q6ZPF3 1715 aa25.7■■□□□ 1.71
Trim27-207ENSMUST00000223065 Zbtb40Q6PCS8 1258 aa25.7■■□□□ 1.7
Trim27-207ENSMUST00000223065 Brpf1B2RRD7 1212 aa25.7■■□□□ 1.7
Trim27-207ENSMUST00000223065 Qtrt2B8ZXI1 415 aa25.7■■□□□ 1.7
Trim27-207ENSMUST00000223065 Ets1P27577 440 aa25.7■■□□□ 1.7
Trim27-207ENSMUST00000223065 Rad50P70388 1312 aa25.69■■□□□ 1.7
Trim27-207ENSMUST00000223065 InsrrQ9WTL4 1300 aa25.69■■□□□ 1.7
Trim27-207ENSMUST00000223065 EspnlQ3UYR4 1005 aa25.69■■□□□ 1.7
Trim27-207ENSMUST00000223065 NexnQ7TPW1 607 aa25.69■■□□□ 1.7
Trim27-207ENSMUST00000223065 Bloc1s4Q8VED2 215 aa25.69■■□□□ 1.7
Trim27-207ENSMUST00000223065 GpkowQ56A08 488 aa25.68■■□□□ 1.7
Trim27-207ENSMUST00000223065 Fkbp5Q64378 456 aa25.68■■□□□ 1.7
Trim27-207ENSMUST00000223065 Ppfia1B2RXQ2 1266 aa25.68■■□□□ 1.7
Trim27-207ENSMUST00000223065 Spryd3E9Q9B3 442 aa25.68■■□□□ 1.7
Trim27-207ENSMUST00000223065 NmiO35309 314 aa25.68■■□□□ 1.7
Trim27-207ENSMUST00000223065 Phactr2B1AVP0 632 aa25.67■■□□□ 1.7
Trim27-207ENSMUST00000223065 Soga3Q6NZL0 945 aa25.67■■□□□ 1.7
Trim27-207ENSMUST00000223065 Adora1Q60612 326 aa25.66■■□□□ 1.7
Trim27-207ENSMUST00000223065 Tmem87bQ8BKU8 555 aa25.66■■□□□ 1.7
Trim27-207ENSMUST00000223065 Slc26a8Q8R0C3 999 aa25.66■■□□□ 1.7
Trim27-207ENSMUST00000223065 Mlh1Q9JK91 760 aa25.66■■□□□ 1.7
Trim27-207ENSMUST00000223065 Syde2E9PUP1 1314 aa25.66■■□□□ 1.7
Trim27-207ENSMUST00000223065 Gnat3Q3V3I2 354 aa25.66■■□□□ 1.7
Trim27-207ENSMUST00000223065 Bag4Q8CI61 457 aa25.66■■□□□ 1.7
Trim27-207ENSMUST00000223065 Smim5Q8BT42 78 aa25.65■■□□□ 1.7
Trim27-207ENSMUST00000223065 Bag3Q9JLV1 577 aaKnown RBP25.65■■□□□ 1.7
Trim27-207ENSMUST00000223065 EvcP57680 1005 aa25.64■■□□□ 1.7
Trim27-207ENSMUST00000223065 Atp6v1dP57746 247 aa25.64■■□□□ 1.7
Trim27-207ENSMUST00000223065 Smarce1O54941 411 aaKnown RBP25.64■■□□□ 1.69
Trim27-207ENSMUST00000223065 Top1mtQ8R4U6 593 aa25.64■■□□□ 1.69
Trim27-207ENSMUST00000223065 Slc5a4bQ91ZP4 660 aa25.64■■□□□ 1.69
Trim27-207ENSMUST00000223065 Ccdc7Q9D541 371 aa25.64■■□□□ 1.69
Trim27-207ENSMUST00000223065 Pdzrn3Q69ZS0 1063 aa25.63■■□□□ 1.69
Trim27-207ENSMUST00000223065 Filip1lQ6P6L0 1131 aa25.63■■□□□ 1.69
Trim27-207ENSMUST00000223065 Nyap1Q6PFX7 833 aa25.63■■□□□ 1.69
Trim27-207ENSMUST00000223065 Zbtb45Q52KG4 520 aa25.63■■□□□ 1.69
Trim27-207ENSMUST00000223065 Utp18Q5SSI6 552 aaKnown RBP25.63■■□□□ 1.69
Trim27-207ENSMUST00000223065 PtmsQ9D0J8 101 aaKnown RBP25.63■■□□□ 1.69
Trim27-207ENSMUST00000223065 Col4a1P02463 1669 aa25.62■■□□□ 1.69
Trim27-207ENSMUST00000223065 Zdhhc9P59268 364 aa25.61■■□□□ 1.69
Trim27-207ENSMUST00000223065 Jarid2Q62315 1234 aa25.61■■□□□ 1.69
Trim27-207ENSMUST00000223065 4930504O13RikQ8C5Z9 145 aa25.61■■□□□ 1.69
Trim27-207ENSMUST00000223065 Rasa1E9PYG6 1038 aa25.61■■□□□ 1.69
Trim27-207ENSMUST00000223065 Znf526Q8BI66 675 aa25.61■■□□□ 1.69
Trim27-207ENSMUST00000223065 KinQ8K339 391 aa25.61■■□□□ 1.69
Trim27-207ENSMUST00000223065 Add2Q9QYB8 725 aa25.6■■□□□ 1.69
Trim27-207ENSMUST00000223065 Tbc1d4Q8BYJ6 1307 aa25.6■■□□□ 1.69
Trim27-207ENSMUST00000223065 Slx4ipQ9D7Y9 413 aa25.59■■□□□ 1.69
Trim27-207ENSMUST00000223065 AK157302I3ITR1 129 aa25.59■■□□□ 1.69
Trim27-207ENSMUST00000223065 Q8C5K5 320 aa25.59■■□□□ 1.69
Trim27-207ENSMUST00000223065 Mylk2Q8VCR8 613 aa25.59■■□□□ 1.69
Trim27-207ENSMUST00000223065 4933402E13RikQ9D4D2 429 aa25.59■■□□□ 1.69
Trim27-207ENSMUST00000223065 Isca1Q9D924 129 aa25.59■■□□□ 1.69
Trim27-207ENSMUST00000223065 Ank1Q02357 1862 aa25.59■■□□□ 1.69
Trim27-207ENSMUST00000223065 PrkcshO08795 521 aa25.58■■□□□ 1.69
Trim27-207ENSMUST00000223065 Strn4P58404 760 aa25.58■■□□□ 1.69
Trim27-207ENSMUST00000223065 Cers3Q1A3B0 383 aa25.58■■□□□ 1.69
Trim27-207ENSMUST00000223065 Ddx11Q6AXC6 880 aa25.58■■□□□ 1.69
Trim27-207ENSMUST00000223065 Ints3Q7TPD0 1041 aaKnown RBP25.58■■□□□ 1.69
Trim27-207ENSMUST00000223065 Rhot2Q8JZN7 620 aa25.58■■□□□ 1.69
Trim27-207ENSMUST00000223065 Stard3nlQ9DCI3 235 aa25.58■■□□□ 1.69
Trim27-207ENSMUST00000223065 Gdpd2Q9ESM6 539 aa25.58■■□□□ 1.69
Trim27-207ENSMUST00000223065 Crb1Q8VHS2 1405 aa25.58■■□□□ 1.69
Trim27-207ENSMUST00000223065 Il1rapl2Q9ERS6 686 aa25.58■■□□□ 1.68
Trim27-207ENSMUST00000223065 Ybx3Q9JKB3 361 aaKnown RBP25.58■■□□□ 1.68
Trim27-207ENSMUST00000223065 Marf1Q8BJ34 1730 aaKnown RBP25.57■■□□□ 1.68
Trim27-207ENSMUST00000223065 Ifit2Q64112 472 aa25.57■■□□□ 1.68
Trim27-207ENSMUST00000223065 Ccnl1Q52KE7 532 aaKnown RBP25.56■■□□□ 1.68
Trim27-207ENSMUST00000223065 Gm12185Q5NCB2 835 aa25.56■■□□□ 1.68
Trim27-207ENSMUST00000223065 DekQ7TNV0 380 aaKnown RBP25.56■■□□□ 1.68
Trim27-207ENSMUST00000223065 Bcl2l12Q9D3J3 255 aa25.56■■□□□ 1.68
Trim27-207ENSMUST00000223065 Cwc25Q9DBF7 416 aa25.56■■□□□ 1.68
Trim27-207ENSMUST00000223065 Akap11E9Q777 1895 aa25.56■■□□□ 1.68
Trim27-207ENSMUST00000223065 PappaQ8R4K8 1624 aa25.56■■□□□ 1.68
Trim27-207ENSMUST00000223065 Shank3Q4ACU6 1730 aa25.56■■□□□ 1.68
Trim27-207ENSMUST00000223065 Kcnh4A2A5F7 1018 aa25.55■■□□□ 1.68
Trim27-207ENSMUST00000223065 Neurod6P48986 337 aa25.55■■□□□ 1.68
Trim27-207ENSMUST00000223065 Chmp4cQ9D7F7 232 aa25.55■■□□□ 1.68
Trim27-207ENSMUST00000223065 Ehd4Q9EQP2 541 aa25.55■■□□□ 1.68
Trim27-207ENSMUST00000223065 Ltb4r2Q9JJL9 360 aa25.55■■□□□ 1.68
Trim27-207ENSMUST00000223065 Zeb2Q9R0G7 1215 aa25.55■■□□□ 1.68
Trim27-207ENSMUST00000223065 Gjb2Q00977 226 aa25.54■■□□□ 1.68
Trim27-207ENSMUST00000223065 Ddx19aQ61655 478 aaKnown RBP25.54■■□□□ 1.68
Trim27-207ENSMUST00000223065 DbnlQ62418 436 aa25.54■■□□□ 1.68
Trim27-207ENSMUST00000223065 Dhx38Q80X98 1228 aa25.54■■□□□ 1.68
Trim27-207ENSMUST00000223065 AbraQ8BUZ1 375 aa25.54■■□□□ 1.68
Trim27-207ENSMUST00000223065 Dis3l2Q8CI75 870 aaKnown RBP25.54■■□□□ 1.68
Trim27-207ENSMUST00000223065 Cap2Q9CYT6 476 aa25.54■■□□□ 1.68
Retrieved 100 of 22,080 RNA–protein pairs in 12.6 ms