RNA–Protein interactions for RNA: ENSMUST00000215817.1

Upf1-202, Transcript of Regulator of nonsense transcripts 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Upf1, Length 4,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1-202ENSMUST00000215817 Dnajc2P54103 621 aaKnown RBP18.37■□□□□ 0.53
Upf1-202ENSMUST00000215817 Rab3gap1Q80UJ7 981 aa18.37■□□□□ 0.53
Upf1-202ENSMUST00000215817 Cnksr1A2A9K7 700 aa18.37■□□□□ 0.53
Upf1-202ENSMUST00000215817 MsnP26041 577 aaKnown RBP18.37■□□□□ 0.53
Upf1-202ENSMUST00000215817 Wwc1Q5SXA9 1104 aa18.37■□□□□ 0.53
Upf1-202ENSMUST00000215817 Pdcl3Q8BVF2 240 aa18.37■□□□□ 0.53
Upf1-202ENSMUST00000215817 Atp8b2P98199 1209 aa18.36■□□□□ 0.53
Upf1-202ENSMUST00000215817 Me1P06801 572 aa18.36■□□□□ 0.53
Upf1-202ENSMUST00000215817 Top1mtQ8R4U6 593 aa18.36■□□□□ 0.53
Upf1-202ENSMUST00000215817 Atp1b3P97370 278 aa18.36■□□□□ 0.53
Upf1-202ENSMUST00000215817 Riok1Q922Q2 567 aa18.36■□□□□ 0.53
Upf1-202ENSMUST00000215817 Dydc2Q9D3X8 139 aa18.35■□□□□ 0.53
Upf1-202ENSMUST00000215817 GalcP54818 684 aa18.35■□□□□ 0.53
Upf1-202ENSMUST00000215817 Trim27Q62158 513 aa18.35■□□□□ 0.53
Upf1-202ENSMUST00000215817 RarsQ9D0I9 660 aaKnown RBP18.35■□□□□ 0.53
Upf1-202ENSMUST00000215817 Anxa1P10107 346 aaKnown RBP18.35■□□□□ 0.53
Upf1-202ENSMUST00000215817 Tnni2P13412 182 aa18.35■□□□□ 0.53
Upf1-202ENSMUST00000215817 Rbm28Q8CGC6 750 aaKnown RBP18.35■□□□□ 0.53
Upf1-202ENSMUST00000215817 Ripk4Q9ERK0 786 aa18.35■□□□□ 0.53
Upf1-202ENSMUST00000215817 Atp2b3Q0VF55 1220 aa18.34■□□□□ 0.53
Upf1-202ENSMUST00000215817 Ddx46Q569Z5 1032 aaKnown RBP18.34■□□□□ 0.53
Upf1-202ENSMUST00000215817 TbcaP48428 108 aaKnown RBP18.34■□□□□ 0.53
Upf1-202ENSMUST00000215817 Slc7a3P70423 618 aa18.34■□□□□ 0.53
Upf1-202ENSMUST00000215817 Nol12Q8BG17 217 aa18.34■□□□□ 0.53
Upf1-202ENSMUST00000215817 Ier5O89113 308 aa18.34■□□□□ 0.53
Upf1-202ENSMUST00000215817 Zbtb45Q52KG4 520 aa18.33■□□□□ 0.53
Upf1-202ENSMUST00000215817 Ptcd1Q8C2E4 695 aaKnown RBP18.33■□□□□ 0.53
Upf1-202ENSMUST00000215817 Smc5Q8CG46 1101 aaKnown RBP18.33■□□□□ 0.53
Upf1-202ENSMUST00000215817 Kif20aP97329 887 aa18.33■□□□□ 0.52
Upf1-202ENSMUST00000215817 Spty2d1Q68FG3 682 aa18.33■□□□□ 0.52
Upf1-202ENSMUST00000215817 Rai14Q9EP71 979 aaKnown RBP18.33■□□□□ 0.52
Upf1-202ENSMUST00000215817 St18Q80TY4 1045 aa18.33■□□□□ 0.52
Upf1-202ENSMUST00000215817 Tbc1d8Q9Z1A9 1134 aa18.33■□□□□ 0.52
Upf1-202ENSMUST00000215817 KinQ8K339 391 aa18.32■□□□□ 0.52
Upf1-202ENSMUST00000215817 Rbm27Q5SFM8 1060 aaKnown RBP18.32■□□□□ 0.52
Upf1-202ENSMUST00000215817 Ccer1Q9CQL2 403 aa18.32■□□□□ 0.52
Upf1-202ENSMUST00000215817 Ino80Q6ZPV2 1559 aa18.32■□□□□ 0.52
Upf1-202ENSMUST00000215817 SlkO54988 1233 aa18.31■□□□□ 0.52
Upf1-202ENSMUST00000215817 Simc1E9Q6E9 1354 aa18.31■□□□□ 0.52
Upf1-202ENSMUST00000215817 Itga6Q61739 1091 aa18.31■□□□□ 0.52
Upf1-202ENSMUST00000215817 R3hcc1Q8BSI6 488 aa18.31■□□□□ 0.52
Upf1-202ENSMUST00000215817 Naa16Q9DBB4 864 aa18.31■□□□□ 0.52
Upf1-202ENSMUST00000215817 Erbb3Q61526 1339 aa18.31■□□□□ 0.52
Upf1-202ENSMUST00000215817 Rabep1O35551 862 aa18.31■□□□□ 0.52
Upf1-202ENSMUST00000215817 Timm10P62073 90 aa18.31■□□□□ 0.52
Upf1-202ENSMUST00000215817 Bcl2l12Q9D3J3 255 aa18.31■□□□□ 0.52
Upf1-202ENSMUST00000215817 Cyp2ab1S4R196 498 aa18.31■□□□□ 0.52
Upf1-202ENSMUST00000215817 Abcc10Q8R4P9 1501 aa18.31■□□□□ 0.52
Upf1-202ENSMUST00000215817 Ppp6r1Q7TSI3 856 aa18.31■□□□□ 0.52
Upf1-202ENSMUST00000215817 Fbxo2Q80UW2 297 aa18.31■□□□□ 0.52
Upf1-202ENSMUST00000215817 Odf2lQ9D478 642 aa18.31■□□□□ 0.52
Upf1-202ENSMUST00000215817 Atf5O70191 283 aa18.3■□□□□ 0.52
Upf1-202ENSMUST00000215817 Ncbp3Q8BZR9 615 aaKnown RBP18.3■□□□□ 0.52
Upf1-202ENSMUST00000215817 Zbtb3Q91X45 518 aa18.3■□□□□ 0.52
Upf1-202ENSMUST00000215817 AU019823E9PUQ3 292 aa18.3■□□□□ 0.52
Upf1-202ENSMUST00000215817 Erc1Q99MI1 1120 aa18.3■□□□□ 0.52
Upf1-202ENSMUST00000215817 IncenpQ9WU62 880 aa18.3■□□□□ 0.52
Upf1-202ENSMUST00000215817 Iqsec3Q3TES0 1195 aa18.3■□□□□ 0.52
Upf1-202ENSMUST00000215817 Letm1Q9Z2I0 738 aa18.3■□□□□ 0.52
Upf1-202ENSMUST00000215817 Abca8aQ8K442 1620 aa18.29■□□□□ 0.52
Upf1-202ENSMUST00000215817 Znf697Q569E7 569 aa18.29■□□□□ 0.52
Upf1-202ENSMUST00000215817 Ehbp1l1Q99MS7 1716 aa18.29■□□□□ 0.52
Upf1-202ENSMUST00000215817 Sh3tc1G3X9F6 1346 aa18.29■□□□□ 0.52
Upf1-202ENSMUST00000215817 Edc3Q8K2D3 508 aaKnown RBP18.29■□□□□ 0.52
Upf1-202ENSMUST00000215817 Sf3a1Q8K4Z5 791 aaKnown RBP18.29■□□□□ 0.52
Upf1-202ENSMUST00000215817 Tfip11Q9ERA6 838 aaKnown RBP18.29■□□□□ 0.52
Upf1-202ENSMUST00000215817 Izumo3A6PWV3 263 aa18.29■□□□□ 0.52
Upf1-202ENSMUST00000215817 CalcaP70160 136 aa18.29■□□□□ 0.52
Upf1-202ENSMUST00000215817 Chl1P70232 1209 aa18.29■□□□□ 0.52
Upf1-202ENSMUST00000215817 Pram1Q6BCL1 675 aa18.29■□□□□ 0.52
Upf1-202ENSMUST00000215817 AidaQ8C4Q6 305 aa18.29■□□□□ 0.52
Upf1-202ENSMUST00000215817 Q9D9S1 216 aa18.29■□□□□ 0.52
Upf1-202ENSMUST00000215817 Psma5Q9Z2U1 241 aaKnown RBP18.29■□□□□ 0.52
Upf1-202ENSMUST00000215817 Bcl9Q9D219 1425 aa18.28■□□□□ 0.52
Upf1-202ENSMUST00000215817 Disp3A3KFU9 1347 aa18.28■□□□□ 0.52
Upf1-202ENSMUST00000215817 Spg7Q3ULF4 781 aa18.28■□□□□ 0.52
Upf1-202ENSMUST00000215817 Dok7Q18PE0 504 aa18.28■□□□□ 0.52
Upf1-202ENSMUST00000215817 Dhx38Q80X98 1228 aa18.28■□□□□ 0.52
Upf1-202ENSMUST00000215817 Hap1O35668 628 aa18.28■□□□□ 0.52
Upf1-202ENSMUST00000215817 Snrpa1P57784 255 aaKnown RBP18.28■□□□□ 0.52
Upf1-202ENSMUST00000215817 Vps53Q8CCB4 832 aa18.28■□□□□ 0.52
Upf1-202ENSMUST00000215817 OscarQ8VBT3 265 aa18.28■□□□□ 0.52
Upf1-202ENSMUST00000215817 Krt25Q8VCW2 446 aa18.28■□□□□ 0.52
Upf1-202ENSMUST00000215817 Smc3Q9CW03 1217 aaKnown RBP18.28■□□□□ 0.52
Upf1-202ENSMUST00000215817 Usp48Q3V0C5 1052 aa18.27■□□□□ 0.52
Upf1-202ENSMUST00000215817 CoilQ5SU73 570 aa18.27■□□□□ 0.52
Upf1-202ENSMUST00000215817 Zbtb40Q6PCS8 1258 aa18.27■□□□□ 0.52
Upf1-202ENSMUST00000215817 Ddrgk1Q80WW9 315 aa18.27■□□□□ 0.52
Upf1-202ENSMUST00000215817 Amigo3Q8C2S7 508 aa18.27■□□□□ 0.52
Upf1-202ENSMUST00000215817 PtmsQ9D0J8 101 aaKnown RBP18.27■□□□□ 0.52
Upf1-202ENSMUST00000215817 Col1a2Q01149 1372 aa18.27■□□□□ 0.52
Upf1-202ENSMUST00000215817 Cplx1P63040 134 aa18.27■□□□□ 0.52
Upf1-202ENSMUST00000215817 Iqsec2Q5DU25 1478 aa18.27■□□□□ 0.52
Upf1-202ENSMUST00000215817 Prr5lA2AVJ5 370 aa18.27■□□□□ 0.51
Upf1-202ENSMUST00000215817 Mcmdc2E9Q956 681 aa18.26■□□□□ 0.51
Upf1-202ENSMUST00000215817 ScaperF8VQ70 1398 aaKnown RBP18.26■□□□□ 0.51
Upf1-202ENSMUST00000215817 Itsn2Q9Z0R6 1659 aa18.26■□□□□ 0.51
Upf1-202ENSMUST00000215817 Casq1O09165 405 aa18.26■□□□□ 0.51
Upf1-202ENSMUST00000215817 Adora1Q60612 326 aa18.26■□□□□ 0.51
Upf1-202ENSMUST00000215817 Atg3Q9CPX6 314 aa18.26■□□□□ 0.51
Retrieved 100 of 22,080 RNA–protein pairs in 44.8 ms