RNA–Protein interactions for RNA: ENSMUST00000211788.1

Ptpre-208, Transcript of Receptor-type tyrosine-protein phosphatase epsilon, mousemouse

TSL 1 (best) BASIC

Gene Ptpre, Length 2,331 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpre-208ENSMUST00000211788 Gtpbp6Q3U6U5 514 aa12.66□□□□□ -0.38
Ptpre-208ENSMUST00000211788 Gzf1Q4VBD9 706 aa12.66□□□□□ -0.38
Ptpre-208ENSMUST00000211788 4930572O03RikQ8C5Y0 211 aa12.66□□□□□ -0.38
Ptpre-208ENSMUST00000211788 Bicc1Q99MQ1 977 aaKnown RBP12.66□□□□□ -0.38
Ptpre-208ENSMUST00000211788 TefQ9JLC6 301 aa12.66□□□□□ -0.38
Ptpre-208ENSMUST00000211788 Casq1O09165 405 aa12.66□□□□□ -0.38
Ptpre-208ENSMUST00000211788 Pa2g4P50580 394 aaKnown RBP12.66□□□□□ -0.38
Ptpre-208ENSMUST00000211788 Prkab2Q6PAM0 271 aa12.66□□□□□ -0.38
Ptpre-208ENSMUST00000211788 Txnrd1Q9JMH6 613 aa12.66□□□□□ -0.38
Ptpre-208ENSMUST00000211788 Eif3aP23116 1344 aaKnown RBP12.65□□□□□ -0.38
Ptpre-208ENSMUST00000211788 1700017N19RikA0A087WPJ1 469 aa12.65□□□□□ -0.38
Ptpre-208ENSMUST00000211788 Zkscan16A2ALW2 728 aa12.65□□□□□ -0.38
Ptpre-208ENSMUST00000211788 Dync1i1O88485 628 aa12.65□□□□□ -0.38
Ptpre-208ENSMUST00000211788 Cct4P80315 539 aaKnown RBP12.65□□□□□ -0.38
Ptpre-208ENSMUST00000211788 Tbc1d31Q6NXY1 996 aa12.65□□□□□ -0.38
Ptpre-208ENSMUST00000211788 Speer4bQ9D9F7 267 aa12.65□□□□□ -0.38
Ptpre-208ENSMUST00000211788 PigbQ9JJQ0 542 aa12.65□□□□□ -0.38
Ptpre-208ENSMUST00000211788 Larp1Q6ZQ58 1072 aaKnown RBP12.65□□□□□ -0.39
Ptpre-208ENSMUST00000211788 Pnma3Q8JZW8 466 aa12.65□□□□□ -0.39
Ptpre-208ENSMUST00000211788 Tnks1bp1P58871 1720 aa12.64□□□□□ -0.39
Ptpre-208ENSMUST00000211788 Hspa2P17156 633 aa12.64□□□□□ -0.39
Ptpre-208ENSMUST00000211788 Ddit3P35639 168 aa12.64□□□□□ -0.39
Ptpre-208ENSMUST00000211788 HellsQ60848 821 aa12.64□□□□□ -0.39
Ptpre-208ENSMUST00000211788 Lmbr1lQ9D1E5 489 aa12.64□□□□□ -0.39
Ptpre-208ENSMUST00000211788 Erich6bQ9D4S6 220 aa12.64□□□□□ -0.39
Ptpre-208ENSMUST00000211788 Nol7Q9D7Z3 254 aaKnown RBP12.64□□□□□ -0.39
Ptpre-208ENSMUST00000211788 Cyp27a1Q9DBG1 533 aa12.64□□□□□ -0.39
Ptpre-208ENSMUST00000211788 Slit1Q80TR4 1531 aa12.64□□□□□ -0.39
Ptpre-208ENSMUST00000211788 Gm21663A0A0G2JE01 267 aa12.63□□□□□ -0.39
Ptpre-208ENSMUST00000211788 Ttll7A4Q9F0 912 aa12.63□□□□□ -0.39
Ptpre-208ENSMUST00000211788 Gm7361D3Z6R1 267 aa12.63□□□□□ -0.39
Ptpre-208ENSMUST00000211788 5031410I06RikE9Q4E0 267 aa12.63□□□□□ -0.39
Ptpre-208ENSMUST00000211788 Gm1979E9QAN3 267 aa12.63□□□□□ -0.39
Ptpre-208ENSMUST00000211788 Gm5862K7N5V5 267 aa12.63□□□□□ -0.39
Ptpre-208ENSMUST00000211788 Gm10220K7N660 267 aa12.63□□□□□ -0.39
Ptpre-208ENSMUST00000211788 Grm8P47743 908 aa12.63□□□□□ -0.39
Ptpre-208ENSMUST00000211788 Zpr1Q62384 459 aa12.63□□□□□ -0.39
Ptpre-208ENSMUST00000211788 Unc5clQ6R653 518 aa12.63□□□□□ -0.39
Ptpre-208ENSMUST00000211788 Slc39a6Q8C145 765 aa12.63□□□□□ -0.39
Ptpre-208ENSMUST00000211788 Noc3lQ8VI84 807 aaKnown RBP12.63□□□□□ -0.39
Ptpre-208ENSMUST00000211788 Stk3Q9JI10 497 aa12.63□□□□□ -0.39
Ptpre-208ENSMUST00000211788 Nol8Q3UHX0 1147 aaKnown RBP12.63□□□□□ -0.39
Ptpre-208ENSMUST00000211788 Mrps27Q8BK72 415 aaKnown RBP12.63□□□□□ -0.39
Ptpre-208ENSMUST00000211788 Tshz3Q8CGV9 1081 aa12.63□□□□□ -0.39
Ptpre-208ENSMUST00000211788 Eif3bQ8JZQ9 803 aaKnown RBP12.63□□□□□ -0.39
Ptpre-208ENSMUST00000211788 Acsbg1Q99PU5 721 aa12.63□□□□□ -0.39
Ptpre-208ENSMUST00000211788 Ltbp4Q8K4G1 1666 aa12.63□□□□□ -0.39
Ptpre-208ENSMUST00000211788 FocadA2AKG8 1798 aa12.62□□□□□ -0.39
Ptpre-208ENSMUST00000211788 Zhx1P70121 873 aa12.62□□□□□ -0.39
Ptpre-208ENSMUST00000211788 Mum1Q6DID5 682 aa12.62□□□□□ -0.39
Ptpre-208ENSMUST00000211788 Brd2Q7JJ13 798 aaKnown RBP12.62□□□□□ -0.39
Ptpre-208ENSMUST00000211788 Slc5a1Q8C3K6 665 aa12.62□□□□□ -0.39
Ptpre-208ENSMUST00000211788 Plekhd1B2RPU2 505 aa12.62□□□□□ -0.39
Ptpre-208ENSMUST00000211788 MccE9PWI3 1003 aa12.62□□□□□ -0.39
Ptpre-208ENSMUST00000211788 Hoxa7P02830 229 aa12.62□□□□□ -0.39
Ptpre-208ENSMUST00000211788 Mindy4Q3UQI9 744 aa12.62□□□□□ -0.39
Ptpre-208ENSMUST00000211788 Brinp3Q499E0 766 aa12.62□□□□□ -0.39
Ptpre-208ENSMUST00000211788 Tshz1Q5DTH5 1084 aa12.62□□□□□ -0.39
Ptpre-208ENSMUST00000211788 Bcl9lQ67FY2 1494 aa12.61□□□□□ -0.39
Ptpre-208ENSMUST00000211788 Ppm1mQ8BU27 406 aa12.61□□□□□ -0.39
Ptpre-208ENSMUST00000211788 Tmx3Q8BXZ1 456 aa12.61□□□□□ -0.39
Ptpre-208ENSMUST00000211788 Zbtb3Q91X45 518 aa12.61□□□□□ -0.39
Ptpre-208ENSMUST00000211788 Efcab2Q9CQ46 164 aa12.61□□□□□ -0.39
Ptpre-208ENSMUST00000211788 Ccdc96Q9CR92 584 aa12.61□□□□□ -0.39
Ptpre-208ENSMUST00000211788 Rnf123Q5XPI3 1314 aa12.61□□□□□ -0.39
Ptpre-208ENSMUST00000211788 Abca15E9PWH4 1668 aa12.61□□□□□ -0.39
Ptpre-208ENSMUST00000211788 Zfp142G5E869 1843 aa12.61□□□□□ -0.39
Ptpre-208ENSMUST00000211788 AcrbpQ3V140 540 aa12.61□□□□□ -0.39
Ptpre-208ENSMUST00000211788 Ssfa2Q922B9 1252 aa12.61□□□□□ -0.39
Ptpre-208ENSMUST00000211788 Chmp4cQ9D7F7 232 aa12.61□□□□□ -0.39
Ptpre-208ENSMUST00000211788 Abcc4E9Q236 1325 aa12.61□□□□□ -0.39
Ptpre-208ENSMUST00000211788 Gm21680A0A0G2JGR8 267 aa12.6□□□□□ -0.39
Ptpre-208ENSMUST00000211788 Phactr2B1AVP0 632 aa12.6□□□□□ -0.39
Ptpre-208ENSMUST00000211788 Arid4aF8VPQ2 1261 aaKnown RBP12.6□□□□□ -0.39
Ptpre-208ENSMUST00000211788 Jakmip1Q8BVL9 626 aa12.6□□□□□ -0.39
Ptpre-208ENSMUST00000211788 Cadps2Q8BYR5 1297 aa12.6□□□□□ -0.39
Ptpre-208ENSMUST00000211788 Brf1Q8CFK2 676 aa12.6□□□□□ -0.39
Ptpre-208ENSMUST00000211788 Edc3Q8K2D3 508 aaKnown RBP12.6□□□□□ -0.39
Ptpre-208ENSMUST00000211788 Plcd3Q8K2J0 785 aa12.6□□□□□ -0.39
Ptpre-208ENSMUST00000211788 ImpactO55091 318 aa12.6□□□□□ -0.39
Ptpre-208ENSMUST00000211788 HdgfP51859 237 aaKnown RBP12.6□□□□□ -0.39
Ptpre-208ENSMUST00000211788 Adam1bQ8R534 806 aa12.6□□□□□ -0.39
Ptpre-208ENSMUST00000211788 Irx4Q9QY61 515 aa12.6□□□□□ -0.39
Ptpre-208ENSMUST00000211788 Pmfbp1Q9WVQ0 1022 aa12.6□□□□□ -0.39
Ptpre-208ENSMUST00000211788 DccP70211 1447 aa12.6□□□□□ -0.39
Ptpre-208ENSMUST00000211788 Ubr2Q6WKZ8 1755 aa12.59□□□□□ -0.39
Ptpre-208ENSMUST00000211788 Ets1P27577 440 aa12.59□□□□□ -0.39
Ptpre-208ENSMUST00000211788 Zbtb45Q52KG4 520 aa12.59□□□□□ -0.39
Ptpre-208ENSMUST00000211788 Zkscan1Q8BGS3 561 aaKnown RBP12.59□□□□□ -0.39
Ptpre-208ENSMUST00000211788 Bloc1s4Q8VED2 215 aa12.59□□□□□ -0.39
Ptpre-208ENSMUST00000211788 EspnlQ3UYR4 1005 aa12.59□□□□□ -0.39
Ptpre-208ENSMUST00000211788 Jarid2Q62315 1234 aa12.59□□□□□ -0.39
Ptpre-208ENSMUST00000211788 Morc2aQ69ZX6 1030 aa12.59□□□□□ -0.39
Ptpre-208ENSMUST00000211788 Brpf1B2RRD7 1212 aa12.58□□□□□ -0.4
Ptpre-208ENSMUST00000211788 Fam228bQ497Q6 232 aa12.58□□□□□ -0.4
Ptpre-208ENSMUST00000211788 LlphQ9D945 130 aaKnown RBP12.58□□□□□ -0.4
Ptpre-208ENSMUST00000211788 Tjp1P39447 1745 aaKnown RBP12.58□□□□□ -0.4
Ptpre-208ENSMUST00000211788 Cbx1P83917 185 aaKnown RBP12.57□□□□□ -0.4
Ptpre-208ENSMUST00000211788 Taf5lQ91WQ5 589 aa12.57□□□□□ -0.4
Ptpre-208ENSMUST00000211788 Mlh1Q9JK91 760 aa12.57□□□□□ -0.4
Retrieved 100 of 22,080 RNA–protein pairs in 15.3 ms