RNA–Protein interactions for RNA: ENSMUST00000139560.7

Ndc1-204, Transcript of Nucleoporin NDC1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ndc1, Length 4,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1-204ENSMUST00000139560 Zkscan16A2ALW2 728 aa13.54□□□□□ -0.24
Ndc1-204ENSMUST00000139560 MycnP03966 462 aaKnown RBP13.54□□□□□ -0.24
Ndc1-204ENSMUST00000139560 Ctdp1Q7TSG2 960 aa13.54□□□□□ -0.24
Ndc1-204ENSMUST00000139560 Tubb6Q922F4 447 aa13.54□□□□□ -0.24
Ndc1-204ENSMUST00000139560 Rbm8aQ9CWZ3 174 aa13.54□□□□□ -0.24
Ndc1-204ENSMUST00000139560 Atp7aQ64430 1491 aa13.54□□□□□ -0.24
Ndc1-204ENSMUST00000139560 Tax1bp1Q3UKC1 814 aaKnown RBP13.54□□□□□ -0.24
Ndc1-204ENSMUST00000139560 Prune1Q8BIW1 454 aa13.54□□□□□ -0.24
Ndc1-204ENSMUST00000139560 Amotl2Q8K371 772 aa13.54□□□□□ -0.24
Ndc1-204ENSMUST00000139560 CenppQ9CZ92 286 aa13.54□□□□□ -0.24
Ndc1-204ENSMUST00000139560 Esyt1Q3U7R1 1092 aaKnown RBP13.53□□□□□ -0.24
Ndc1-204ENSMUST00000139560 Clcn1Q64347 994 aa13.53□□□□□ -0.24
Ndc1-204ENSMUST00000139560 Rnf34Q99KR6 376 aa13.53□□□□□ -0.24
Ndc1-204ENSMUST00000139560 Ccdc83Q9D4V3 305 aa13.53□□□□□ -0.24
Ndc1-204ENSMUST00000139560 Ccdc39Q9D5Y1 937 aa13.53□□□□□ -0.24
Ndc1-204ENSMUST00000139560 Stx1aO35526 288 aa13.53□□□□□ -0.24
Ndc1-204ENSMUST00000139560 Vamp4O70480 141 aa13.53□□□□□ -0.24
Ndc1-204ENSMUST00000139560 Ranbp1P34022 203 aaKnown RBP13.53□□□□□ -0.24
Ndc1-204ENSMUST00000139560 L1td1Q587J6 782 aaKnown RBP13.53□□□□□ -0.24
Ndc1-204ENSMUST00000139560 RalylQ8BTF8 293 aa13.53□□□□□ -0.24
Ndc1-204ENSMUST00000139560 Thoc2B1AZI6 1594 aaKnown RBP13.53□□□□□ -0.24
Ndc1-204ENSMUST00000139560 Krt84Q99M73 603 aa13.53□□□□□ -0.24
Ndc1-204ENSMUST00000139560 Ythdc2B2RR83 1445 aaKnown RBP13.52□□□□□ -0.24
Ndc1-204ENSMUST00000139560 Dctn1O08788 1281 aa13.52□□□□□ -0.24
Ndc1-204ENSMUST00000139560 Txndc16Q7TN22 820 aa13.52□□□□□ -0.24
Ndc1-204ENSMUST00000139560 Farp2Q91VS8 1065 aa13.52□□□□□ -0.24
Ndc1-204ENSMUST00000139560 Asxl2Q8BZ32 1370 aa13.52□□□□□ -0.24
Ndc1-204ENSMUST00000139560 LifrP42703 1092 aa13.52□□□□□ -0.24
Ndc1-204ENSMUST00000139560 Nol11Q8BJW5 723 aaKnown RBP13.52□□□□□ -0.24
Ndc1-204ENSMUST00000139560 Cdca7Q9D0M2 382 aa13.52□□□□□ -0.24
Ndc1-204ENSMUST00000139560 Mex3cQ05A36 652 aaKnown RBP13.52□□□□□ -0.25
Ndc1-204ENSMUST00000139560 Mindy4Q3UQI9 744 aa13.52□□□□□ -0.25
Ndc1-204ENSMUST00000139560 Bloc1s2Q9CWG9 143 aa13.52□□□□□ -0.25
Ndc1-204ENSMUST00000139560 Rbm33Q9CXK9 1231 aaKnown RBP13.52□□□□□ -0.25
Ndc1-204ENSMUST00000139560 Zscan25B2RX31 543 aa13.52□□□□□ -0.25
Ndc1-204ENSMUST00000139560 Sdc2P43407 202 aa13.52□□□□□ -0.25
Ndc1-204ENSMUST00000139560 Map3k2Q61083 619 aa13.52□□□□□ -0.25
Ndc1-204ENSMUST00000139560 Gm3409A0A0G2JE67 319 aa13.51□□□□□ -0.25
Ndc1-204ENSMUST00000139560 Pdzrn3Q69ZS0 1063 aa13.51□□□□□ -0.25
Ndc1-204ENSMUST00000139560 RestQ8VIG1 1082 aa13.51□□□□□ -0.25
Ndc1-204ENSMUST00000139560 Cyp27a1Q9DBG1 533 aa13.51□□□□□ -0.25
Ndc1-204ENSMUST00000139560 Mlh1Q9JK91 760 aa13.51□□□□□ -0.25
Ndc1-204ENSMUST00000139560 LyarQ08288 388 aaKnown RBP13.51□□□□□ -0.25
Ndc1-204ENSMUST00000139560 Baiap2l1Q9DBJ3 514 aa13.51□□□□□ -0.25
Ndc1-204ENSMUST00000139560 Elp1Q7TT37 1333 aaKnown RBP13.51□□□□□ -0.25
Ndc1-204ENSMUST00000139560 Stat1P42225 749 aa13.51□□□□□ -0.25
Ndc1-204ENSMUST00000139560 Ncapg2Q6DFV1 1138 aa13.51□□□□□ -0.25
Ndc1-204ENSMUST00000139560 Ano10Q8BH79 659 aa13.51□□□□□ -0.25
Ndc1-204ENSMUST00000139560 Ano1Q8BHY3 960 aa13.51□□□□□ -0.25
Ndc1-204ENSMUST00000139560 Ccdc73Q8CDM4 1066 aa13.51□□□□□ -0.25
Ndc1-204ENSMUST00000139560 Dzip1Q8BMD2 852 aa13.51□□□□□ -0.25
Ndc1-204ENSMUST00000139560 Atf7Q8R0S1 413 aa13.51□□□□□ -0.25
Ndc1-204ENSMUST00000139560 Gtf3c5Q8R2T8 520 aa13.51□□□□□ -0.25
Ndc1-204ENSMUST00000139560 Cfap45Q9D9U9 551 aa13.51□□□□□ -0.25
Ndc1-204ENSMUST00000139560 Rfx7F8VPJ6 1459 aa13.5□□□□□ -0.25
Ndc1-204ENSMUST00000139560 Fam135aQ6NS59 1506 aa13.5□□□□□ -0.25
Ndc1-204ENSMUST00000139560 Ppfia1B2RXQ2 1266 aa13.5□□□□□ -0.25
Ndc1-204ENSMUST00000139560 Atp2b1G5E829 1220 aa13.5□□□□□ -0.25
Ndc1-204ENSMUST00000139560 Myd88P22366 296 aa13.5□□□□□ -0.25
Ndc1-204ENSMUST00000139560 Dnm1P39053 867 aa13.5□□□□□ -0.25
Ndc1-204ENSMUST00000139560 GptQ8QZR5 496 aa13.5□□□□□ -0.25
Ndc1-204ENSMUST00000139560 Klc3Q91W40 508 aa13.5□□□□□ -0.25
Ndc1-204ENSMUST00000139560 Chaf1aQ9QWF0 911 aa13.5□□□□□ -0.25
Ndc1-204ENSMUST00000139560 Ankrd26Q811D2 1581 aa13.5□□□□□ -0.25
Ndc1-204ENSMUST00000139560 Mtx1P47802 317 aa13.5□□□□□ -0.25
Ndc1-204ENSMUST00000139560 Nbr1P97432 988 aa13.5□□□□□ -0.25
Ndc1-204ENSMUST00000139560 Znf526Q8BI66 675 aa13.5□□□□□ -0.25
Ndc1-204ENSMUST00000139560 Syt1P46096 421 aa13.5□□□□□ -0.25
Ndc1-204ENSMUST00000139560 Gbp4Q61107 620 aa13.5□□□□□ -0.25
Ndc1-204ENSMUST00000139560 Jade2Q6ZQF7 829 aa13.5□□□□□ -0.25
Ndc1-204ENSMUST00000139560 Paf1Q8K2T8 535 aa13.5□□□□□ -0.25
Ndc1-204ENSMUST00000139560 Pik3c2gO70167 1506 aa13.5□□□□□ -0.25
Ndc1-204ENSMUST00000139560 Snap23O09044 210 aa13.49□□□□□ -0.25
Ndc1-204ENSMUST00000139560 Nup133Q8R0G9 1155 aa13.49□□□□□ -0.25
Ndc1-204ENSMUST00000139560 Fbln2P37889 1221 aa13.49□□□□□ -0.25
Ndc1-204ENSMUST00000139560 Capza3P70190 299 aa13.49□□□□□ -0.25
Ndc1-204ENSMUST00000139560 Stim1P70302 685 aa13.49□□□□□ -0.25
Ndc1-204ENSMUST00000139560 Matr3Q8K310 846 aaKnown RBP13.49□□□□□ -0.25
Ndc1-204ENSMUST00000139560 Ppp4r3bQ922R5 820 aa13.49□□□□□ -0.25
Ndc1-204ENSMUST00000139560 2310002L09RikQ9D7L5 217 aa13.49□□□□□ -0.25
Ndc1-204ENSMUST00000139560 IncenpQ9WU62 880 aa13.49□□□□□ -0.25
Ndc1-204ENSMUST00000139560 Arglu1Q3UL36 271 aaKnown RBP13.49□□□□□ -0.25
Ndc1-204ENSMUST00000139560 Slf2Q6P9P0 1278 aa13.49□□□□□ -0.25
Ndc1-204ENSMUST00000139560 AI481877A2ALV5 1481 aa13.49□□□□□ -0.25
Ndc1-204ENSMUST00000139560 Mapkbp1Q6NS57 1503 aa13.49□□□□□ -0.25
Ndc1-204ENSMUST00000139560 Mdm2P23804 489 aa13.49□□□□□ -0.25
Ndc1-204ENSMUST00000139560 Sh3bp1P55194 680 aa13.49□□□□□ -0.25
Ndc1-204ENSMUST00000139560 Bbof1Q3V079 533 aa13.49□□□□□ -0.25
Ndc1-204ENSMUST00000139560 U2af1l4Q8BGJ9 220 aa13.49□□□□□ -0.25
Ndc1-204ENSMUST00000139560 Ano2Q8CFW1 1002 aa13.49□□□□□ -0.25
Ndc1-204ENSMUST00000139560 BC005561E9Q5E2 1589 aa13.48□□□□□ -0.25
Ndc1-204ENSMUST00000139560 Jmjd4Q8BFT6 427 aa13.48□□□□□ -0.25
Ndc1-204ENSMUST00000139560 Pnpla2Q8BJ56 486 aa13.48□□□□□ -0.25
Ndc1-204ENSMUST00000139560 Trim11Q99PQ2 467 aa13.48□□□□□ -0.25
Ndc1-204ENSMUST00000139560 Galntl5Q9D4M9 431 aa13.48□□□□□ -0.25
Ndc1-204ENSMUST00000139560 Pik3r4Q8VD65 1358 aa13.48□□□□□ -0.25
Ndc1-204ENSMUST00000139560 Gm45015A0A140LII9 184 aa13.48□□□□□ -0.25
Ndc1-204ENSMUST00000139560 Gm18336A0A140LIU8 765 aa13.48□□□□□ -0.25
Ndc1-204ENSMUST00000139560 Irf9Q61179 399 aa13.48□□□□□ -0.25
Ndc1-204ENSMUST00000139560 Rai14Q9EP71 979 aaKnown RBP13.48□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 22.2 ms