RNA–Protein interactions for RNA: ENSMUST00000093490.8

Clcn3-203, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-203ENSMUST00000093490 Dydc2Q9D3X8 139 aa18.3■□□□□ 0.52
Clcn3-203ENSMUST00000093490 Ccnl1Q52KE7 532 aaKnown RBP18.3■□□□□ 0.52
Clcn3-203ENSMUST00000093490 Pof1bQ8K4L4 587 aa18.3■□□□□ 0.52
Clcn3-203ENSMUST00000093490 Ppp1r21Q3TDD9 780 aa18.29■□□□□ 0.52
Clcn3-203ENSMUST00000093490 Brms1Q99N20 246 aa18.29■□□□□ 0.52
Clcn3-203ENSMUST00000093490 Tnni2P13412 182 aa18.29■□□□□ 0.52
Clcn3-203ENSMUST00000093490 Hdgfl1Q2VPR5 283 aa18.29■□□□□ 0.52
Clcn3-203ENSMUST00000093490 Iqca1Q9CUL5 857 aa18.29■□□□□ 0.52
Clcn3-203ENSMUST00000093490 Atxn3Q9CVD2 355 aa18.29■□□□□ 0.52
Clcn3-203ENSMUST00000093490 Uspl1Q3ULM6 1089 aa18.28■□□□□ 0.52
Clcn3-203ENSMUST00000093490 VeztQ3ZK22 780 aa18.28■□□□□ 0.52
Clcn3-203ENSMUST00000093490 Golim4Q8BXA1 655 aa18.28■□□□□ 0.52
Clcn3-203ENSMUST00000093490 Trim30cD3YVI9 513 aa18.28■□□□□ 0.52
Clcn3-203ENSMUST00000093490 Cul5Q9D5V5 780 aa18.28■□□□□ 0.52
Clcn3-203ENSMUST00000093490 Olr1Q9EQ09 363 aa18.28■□□□□ 0.52
Clcn3-203ENSMUST00000093490 Gm7347D3YYI9 267 aa18.27■□□□□ 0.52
Clcn3-203ENSMUST00000093490 Speer4aF8VPX6 267 aa18.27■□□□□ 0.52
Clcn3-203ENSMUST00000093490 Arglu1Q3UL36 271 aaKnown RBP18.27■□□□□ 0.52
Clcn3-203ENSMUST00000093490 Gbp4Q61107 620 aa18.27■□□□□ 0.52
Clcn3-203ENSMUST00000093490 Tmem132eQ6IEE6 982 aa18.27■□□□□ 0.52
Clcn3-203ENSMUST00000093490 GptQ8QZR5 496 aa18.27■□□□□ 0.52
Clcn3-203ENSMUST00000093490 Ccar2Q8VDP4 922 aaKnown RBP18.27■□□□□ 0.52
Clcn3-203ENSMUST00000093490 Smarca5Q91ZW3 1051 aaKnown RBP18.27■□□□□ 0.52
Clcn3-203ENSMUST00000093490 Bag4Q8CI61 457 aa18.27■□□□□ 0.52
Clcn3-203ENSMUST00000093490 Dnajc10Q9DC23 793 aa18.27■□□□□ 0.52
Clcn3-203ENSMUST00000093490 Col17a1Q07563 1470 aa18.27■□□□□ 0.52
Clcn3-203ENSMUST00000093490 Ppp4r3aQ6P2K6 820 aa18.27■□□□□ 0.51
Clcn3-203ENSMUST00000093490 Ankrd1Q9CR42 319 aa18.27■□□□□ 0.51
Clcn3-203ENSMUST00000093490 Tbc1d9Q3UYK3 1264 aa18.27■□□□□ 0.51
Clcn3-203ENSMUST00000093490 GlmnQ8BZM1 596 aa18.27■□□□□ 0.51
Clcn3-203ENSMUST00000093490 Fam160b2Q80YR2 744 aa18.26■□□□□ 0.51
Clcn3-203ENSMUST00000093490 4931400O07RikQ9D4M5 137 aa18.26■□□□□ 0.51
Clcn3-203ENSMUST00000093490 Hmg20bQ9Z104 317 aa18.26■□□□□ 0.51
Clcn3-203ENSMUST00000093490 Paxbp1P58501 919 aa18.26■□□□□ 0.51
Clcn3-203ENSMUST00000093490 Trim11Q99PQ2 467 aa18.26■□□□□ 0.51
Clcn3-203ENSMUST00000093490 Rasa1E9PYG6 1038 aa18.25■□□□□ 0.51
Clcn3-203ENSMUST00000093490 Stx1aO35526 288 aa18.25■□□□□ 0.51
Clcn3-203ENSMUST00000093490 Tmem67Q8BR76 992 aa18.25■□□□□ 0.51
Clcn3-203ENSMUST00000093490 Adgrb2Q8CGM1 1561 aa18.25■□□□□ 0.51
Clcn3-203ENSMUST00000093490 Eif4a2P10630 407 aa18.25■□□□□ 0.51
Clcn3-203ENSMUST00000093490 Myo1bP46735 1107 aa18.25■□□□□ 0.51
Clcn3-203ENSMUST00000093490 Cbx1P83917 185 aaKnown RBP18.25■□□□□ 0.51
Clcn3-203ENSMUST00000093490 Jdp2P97875 163 aa18.25■□□□□ 0.51
Clcn3-203ENSMUST00000093490 GckrQ91X44 587 aa18.25■□□□□ 0.51
Clcn3-203ENSMUST00000093490 TxlnaQ6PAM1 554 aaKnown RBP18.25■□□□□ 0.51
Clcn3-203ENSMUST00000093490 Amotl2Q8K371 772 aa18.25■□□□□ 0.51
Clcn3-203ENSMUST00000093490 Wdr63B2RY71 923 aa18.24■□□□□ 0.51
Clcn3-203ENSMUST00000093490 Sbno1Q689Z5 1390 aa18.24■□□□□ 0.51
Clcn3-203ENSMUST00000093490 Mcm10Q0VBD2 885 aa18.24■□□□□ 0.51
Clcn3-203ENSMUST00000093490 Ddx46Q569Z5 1032 aaKnown RBP18.24■□□□□ 0.51
Clcn3-203ENSMUST00000093490 Limch1Q3UH68 1057 aa18.24■□□□□ 0.51
Clcn3-203ENSMUST00000093490 Maats1Q8BRC6 783 aa18.24■□□□□ 0.51
Clcn3-203ENSMUST00000093490 Edc4Q3UJB9 1406 aaKnown RBP18.24■□□□□ 0.51
Clcn3-203ENSMUST00000093490 Ube2hP62257 183 aa18.24■□□□□ 0.51
Clcn3-203ENSMUST00000093490 Luzp1Q8R4U7 1068 aaKnown RBP18.24■□□□□ 0.51
Clcn3-203ENSMUST00000093490 Lrrc43Q3V0L5 667 aa18.24■□□□□ 0.51
Clcn3-203ENSMUST00000093490 Tmc2Q8R4P4 888 aa18.24■□□□□ 0.51
Clcn3-203ENSMUST00000093490 Krt25Q8VCW2 446 aa18.24■□□□□ 0.51
Clcn3-203ENSMUST00000093490 Adcy5P84309 1262 aa18.23■□□□□ 0.51
Clcn3-203ENSMUST00000093490 ThemisQ8BGW0 636 aa18.23■□□□□ 0.51
Clcn3-203ENSMUST00000093490 Rad23bP54728 416 aa18.23■□□□□ 0.51
Clcn3-203ENSMUST00000093490 Ift74Q8BKE9 600 aa18.23■□□□□ 0.51
Clcn3-203ENSMUST00000093490 Ccdc150Q8CDI7 1110 aa18.23■□□□□ 0.51
Clcn3-203ENSMUST00000093490 Zkscan7E9PVW1 718 aa18.23■□□□□ 0.51
Clcn3-203ENSMUST00000093490 Hspa4Q61316 841 aa18.23■□□□□ 0.51
Clcn3-203ENSMUST00000093490 Nphp3Q7TNH6 1325 aa18.22■□□□□ 0.51
Clcn3-203ENSMUST00000093490 Hdac9Q99N13 588 aa18.22■□□□□ 0.51
Clcn3-203ENSMUST00000093490 Stx6Q9JKK1 255 aa18.22■□□□□ 0.51
Clcn3-203ENSMUST00000093490 DmtnQ9WV69 405 aa18.22■□□□□ 0.51
Clcn3-203ENSMUST00000093490 NsmfQ99NF2 532 aa18.22■□□□□ 0.51
Clcn3-203ENSMUST00000093490 Uri1Q3TLD5 531 aa18.22■□□□□ 0.51
Clcn3-203ENSMUST00000093490 Kcna6Q61923 529 aa18.22■□□□□ 0.51
Clcn3-203ENSMUST00000093490 Secisbp2lQ6A098 1086 aaKnown RBP18.22■□□□□ 0.51
Clcn3-203ENSMUST00000093490 Fam213aQ9CYH2 218 aa18.22■□□□□ 0.51
Clcn3-203ENSMUST00000093490 Pprc1Q6NZN1 1644 aa18.22■□□□□ 0.51
Clcn3-203ENSMUST00000093490 NppbP40753 121 aa18.21■□□□□ 0.51
Clcn3-203ENSMUST00000093490 Igf2bp2Q5SF07 592 aaKnown RBP18.21■□□□□ 0.51
Clcn3-203ENSMUST00000093490 Trim25Q61510 634 aaKnown RBP18.21■□□□□ 0.51
Clcn3-203ENSMUST00000093490 RarsQ9D0I9 660 aaKnown RBP18.21■□□□□ 0.51
Clcn3-203ENSMUST00000093490 Mybbp1aQ7TPV4 1344 aaKnown RBP18.21■□□□□ 0.51
Clcn3-203ENSMUST00000093490 Nphp4P59240 1425 aa18.21■□□□□ 0.51
Clcn3-203ENSMUST00000093490 Mcm3P25206 812 aaKnown RBP18.21■□□□□ 0.51
Clcn3-203ENSMUST00000093490 Nucb2P81117 420 aa18.21■□□□□ 0.51
Clcn3-203ENSMUST00000093490 Mrpl12Q9DB15 201 aaKnown RBP18.21■□□□□ 0.51
Clcn3-203ENSMUST00000093490 Jade2Q6ZQF7 829 aa18.21■□□□□ 0.51
Clcn3-203ENSMUST00000093490 Arhgef40Q3UPH7 1517 aa18.21■□□□□ 0.51
Clcn3-203ENSMUST00000093490 Lrriq1Q0P5X1 1673 aa18.21■□□□□ 0.51
Clcn3-203ENSMUST00000093490 Ttc14Q9CSP9 761 aa18.21■□□□□ 0.51
Clcn3-203ENSMUST00000093490 Tacc1Q6Y685 774 aa18.21■□□□□ 0.5
Clcn3-203ENSMUST00000093490 Pm20d1Q8C165 503 aa18.21■□□□□ 0.5
Clcn3-203ENSMUST00000093490 Erlin1Q91X78 346 aa18.21■□□□□ 0.5
Clcn3-203ENSMUST00000093490 SphkapQ6NSW3 1687 aa18.2■□□□□ 0.5
Clcn3-203ENSMUST00000093490 Jakmip3Q5DTN8 844 aa18.2■□□□□ 0.5
Clcn3-203ENSMUST00000093490 Ces1hD3Z298 562 aa18.2■□□□□ 0.5
Clcn3-203ENSMUST00000093490 LlphQ9D945 130 aaKnown RBP18.2■□□□□ 0.5
Clcn3-203ENSMUST00000093490 Znf335A2A5K6 1337 aa18.2■□□□□ 0.5
Clcn3-203ENSMUST00000093490 Ltv1Q6NSQ7 470 aaKnown RBP18.19■□□□□ 0.5
Clcn3-203ENSMUST00000093490 Smtnl1Q99LM3 459 aa18.19■□□□□ 0.5
Clcn3-203ENSMUST00000093490 Mipol1Q9D9F8 279 aa18.19■□□□□ 0.5
Clcn3-203ENSMUST00000093490 Glg1Q61543 1175 aaKnown RBP18.19■□□□□ 0.5
Retrieved 100 of 22,080 RNA–protein pairs in 7.6 ms