RNA–Protein interactions for RNA: ENSMUST00000073961.7

Ptpre-201, Transcript of Receptor-type tyrosine-protein phosphatase epsilon, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ptpre, Length 5,410 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpre-201ENSMUST00000073961 Kdm3aQ6PCM1 1323 aa20.16■□□□□ 0.82
Ptpre-201ENSMUST00000073961 Myd88P22366 296 aa20.16■□□□□ 0.82
Ptpre-201ENSMUST00000073961 Cnga2Q62398 664 aa20.16■□□□□ 0.82
Ptpre-201ENSMUST00000073961 Cdan1Q8CC12 1239 aa20.16■□□□□ 0.82
Ptpre-201ENSMUST00000073961 Cfap53Q9D439 514 aa20.16■□□□□ 0.82
Ptpre-201ENSMUST00000073961 Metap2O08663 478 aaKnown RBP20.16■□□□□ 0.82
Ptpre-201ENSMUST00000073961 Bbof1Q3V079 533 aa20.16■□□□□ 0.82
Ptpre-201ENSMUST00000073961 Smco2Q9DA21 347 aa20.16■□□□□ 0.82
Ptpre-201ENSMUST00000073961 Rai14Q9EP71 979 aaKnown RBP20.16■□□□□ 0.82
Ptpre-201ENSMUST00000073961 Dapk3O54784 448 aa20.16■□□□□ 0.82
Ptpre-201ENSMUST00000073961 Sil1Q9EPK6 465 aa20.16■□□□□ 0.82
Ptpre-201ENSMUST00000073961 Aldh8a1Q8BH00 487 aa20.15■□□□□ 0.82
Ptpre-201ENSMUST00000073961 FanclQ9CR14 375 aa20.15■□□□□ 0.82
Ptpre-201ENSMUST00000073961 Gpatch8A2A6A1 1505 aa20.15■□□□□ 0.82
Ptpre-201ENSMUST00000073961 Tbc1d2bQ3U0J8 965 aa20.15■□□□□ 0.82
Ptpre-201ENSMUST00000073961 Ripk4Q9ERK0 786 aa20.15■□□□□ 0.82
Ptpre-201ENSMUST00000073961 Bicdl1A0JNT9 577 aa20.15■□□□□ 0.82
Ptpre-201ENSMUST00000073961 Serpina10Q8R121 448 aa20.15■□□□□ 0.82
Ptpre-201ENSMUST00000073961 Catsper2A2ARP9 588 aa20.15■□□□□ 0.82
Ptpre-201ENSMUST00000073961 TimelessQ9R1X4 1197 aa20.15■□□□□ 0.82
Ptpre-201ENSMUST00000073961 Brd3Q8K2F0 726 aaKnown RBP20.14■□□□□ 0.82
Ptpre-201ENSMUST00000073961 Vps18Q8R307 973 aa20.14■□□□□ 0.82
Ptpre-201ENSMUST00000073961 Pdia3P27773 505 aaKnown RBP20.14■□□□□ 0.81
Ptpre-201ENSMUST00000073961 Gng11P61953 73 aa20.14■□□□□ 0.81
Ptpre-201ENSMUST00000073961 Ctr9Q62018 1173 aaKnown RBP20.14■□□□□ 0.81
Ptpre-201ENSMUST00000073961 Ankle2Q6P1H6 964 aa20.14■□□□□ 0.81
Ptpre-201ENSMUST00000073961 Ccdc12Q8R344 166 aaKnown RBP20.14■□□□□ 0.81
Ptpre-201ENSMUST00000073961 Rad50P70388 1312 aa20.13■□□□□ 0.81
Ptpre-201ENSMUST00000073961 Igf2bp2Q5SF07 592 aaKnown RBP20.13■□□□□ 0.81
Ptpre-201ENSMUST00000073961 Calml4Q91WQ9 153 aa20.13■□□□□ 0.81
Ptpre-201ENSMUST00000073961 BbxQ8VBW5 907 aa20.13■□□□□ 0.81
Ptpre-201ENSMUST00000073961 Olr1Q9EQ09 363 aa20.13■□□□□ 0.81
Ptpre-201ENSMUST00000073961 Ppip5k1A2ARP1 1436 aa20.13■□□□□ 0.81
Ptpre-201ENSMUST00000073961 Nfxl1E9Q8I7 918 aaKnown RBP20.13■□□□□ 0.81
Ptpre-201ENSMUST00000073961 CebpzP53569 1052 aaKnown RBP20.13■□□□□ 0.81
Ptpre-201ENSMUST00000073961 Fancd2Q80V62 1450 aa20.13■□□□□ 0.81
Ptpre-201ENSMUST00000073961 Ddx10Q80Y44 875 aaKnown RBP20.13■□□□□ 0.81
Ptpre-201ENSMUST00000073961 Ano2Q8CFW1 1002 aa20.13■□□□□ 0.81
Ptpre-201ENSMUST00000073961 Fez2Q6TYB5 348 aa20.13■□□□□ 0.81
Ptpre-201ENSMUST00000073961 Thoc2B1AZI6 1594 aaKnown RBP20.12■□□□□ 0.81
Ptpre-201ENSMUST00000073961 Akap2O54931 893 aa20.12■□□□□ 0.81
Ptpre-201ENSMUST00000073961 Cavin2Q63918 418 aaKnown RBP20.12■□□□□ 0.81
Ptpre-201ENSMUST00000073961 Tubb4aQ9D6F9 444 aa20.12■□□□□ 0.81
Ptpre-201ENSMUST00000073961 Cwc25Q9DBF7 416 aa20.12■□□□□ 0.81
Ptpre-201ENSMUST00000073961 Atp10dQ8K2X1 1416 aa20.12■□□□□ 0.81
Ptpre-201ENSMUST00000073961 Ccdc112A0AUP1 442 aa20.12■□□□□ 0.81
Ptpre-201ENSMUST00000073961 Klhl10Q9D5V2 608 aa20.12■□□□□ 0.81
Ptpre-201ENSMUST00000073961 GmnnO88513 206 aa20.12■□□□□ 0.81
Ptpre-201ENSMUST00000073961 InsrP15208 1372 aa20.12■□□□□ 0.81
Ptpre-201ENSMUST00000073961 Gm21985Q6P6P5 1106 aa20.11■□□□□ 0.81
Ptpre-201ENSMUST00000073961 Jmjd4Q8BFT6 427 aa20.11■□□□□ 0.81
Ptpre-201ENSMUST00000073961 Tax1bp1Q3UKC1 814 aaKnown RBP20.11■□□□□ 0.81
Ptpre-201ENSMUST00000073961 3425401B19RikD3Z1D3 1412 aa20.11■□□□□ 0.81
Ptpre-201ENSMUST00000073961 Mapkbp1Q6NS57 1503 aa20.11■□□□□ 0.81
Ptpre-201ENSMUST00000073961 Snx13Q6PHS6 957 aa20.11■□□□□ 0.81
Ptpre-201ENSMUST00000073961 Atp8b2P98199 1209 aa20.11■□□□□ 0.81
Ptpre-201ENSMUST00000073961 Smc1aQ9CU62 1233 aaKnown RBP20.11■□□□□ 0.81
Ptpre-201ENSMUST00000073961 Rbm8a2A0A0N4SUH6 174 aa20.1■□□□□ 0.81
Ptpre-201ENSMUST00000073961 Rbm8aQ9CWZ3 174 aa20.1■□□□□ 0.81
Ptpre-201ENSMUST00000073961 Arhgef12Q8R4H2 1543 aaKnown RBP20.1■□□□□ 0.81
Ptpre-201ENSMUST00000073961 Zap70P43404 618 aa20.1■□□□□ 0.81
Ptpre-201ENSMUST00000073961 VeztQ3ZK22 780 aa20.1■□□□□ 0.81
Ptpre-201ENSMUST00000073961 Syt10Q9R0N4 523 aa20.1■□□□□ 0.81
Ptpre-201ENSMUST00000073961 Cacna2d4Q5RJF7 1116 aa20.09■□□□□ 0.81
Ptpre-201ENSMUST00000073961 Hand2Q61039 217 aa20.09■□□□□ 0.81
Ptpre-201ENSMUST00000073961 Tmem266Q8BZB3 538 aa20.09■□□□□ 0.81
Ptpre-201ENSMUST00000073961 Krt25Q8VCW2 446 aa20.09■□□□□ 0.81
Ptpre-201ENSMUST00000073961 Klhdc4Q921I2 584 aa20.09■□□□□ 0.81
Ptpre-201ENSMUST00000073961 Chd1lQ9CXF7 900 aa20.09■□□□□ 0.81
Ptpre-201ENSMUST00000073961 U2af1l4Q8BGJ9 220 aa20.09■□□□□ 0.81
Ptpre-201ENSMUST00000073961 Hs2st1Q8R3H7 356 aa20.09■□□□□ 0.81
Ptpre-201ENSMUST00000073961 Zbtb21E9Q444 1094 aa20.09■□□□□ 0.81
Ptpre-201ENSMUST00000073961 Pde4dQ01063 747 aa20.09■□□□□ 0.81
Ptpre-201ENSMUST00000073961 Slx4ipQ9D7Y9 413 aa20.09■□□□□ 0.81
Ptpre-201ENSMUST00000073961 Als2cr12Q8BVM7 383 aa20.08■□□□□ 0.81
Ptpre-201ENSMUST00000073961 Nphp3Q7TNH6 1325 aa20.08■□□□□ 0.81
Ptpre-201ENSMUST00000073961 Smarcc1P97496 1104 aa20.08■□□□□ 0.8
Ptpre-201ENSMUST00000073961 Spg7Q3ULF4 781 aa20.08■□□□□ 0.8
Ptpre-201ENSMUST00000073961 Uchl5Q9WUP7 329 aa20.08■□□□□ 0.8
Ptpre-201ENSMUST00000073961 Zmym3Q9JLM4 1370 aa20.08■□□□□ 0.8
Ptpre-201ENSMUST00000073961 BC005561E9Q5E2 1589 aa20.07■□□□□ 0.8
Ptpre-201ENSMUST00000073961 Rbbp8nlA2ABX0 614 aa20.07■□□□□ 0.8
Ptpre-201ENSMUST00000073961 Sh3d21Q7TSG5 549 aa20.07■□□□□ 0.8
Ptpre-201ENSMUST00000073961 Nop53Q8BK35 484 aaKnown RBP20.07■□□□□ 0.8
Ptpre-201ENSMUST00000073961 Ctage5Q8R311 779 aa20.07■□□□□ 0.8
Ptpre-201ENSMUST00000073961 Speer4dL7N216 212 aa20.07■□□□□ 0.8
Ptpre-201ENSMUST00000073961 Ncoa3O09000 1398 aa20.07■□□□□ 0.8
Ptpre-201ENSMUST00000073961 Tbc1d8bA3KGB4 1114 aa20.06■□□□□ 0.8
Ptpre-201ENSMUST00000073961 Kmt5bQ3U8K7 883 aa20.06■□□□□ 0.8
Ptpre-201ENSMUST00000073961 Serpinb6bO08804 377 aa20.06■□□□□ 0.8
Ptpre-201ENSMUST00000073961 Ppp1r10Q80W00 888 aaKnown RBP20.06■□□□□ 0.8
Ptpre-201ENSMUST00000073961 Cul5Q9D5V5 780 aa20.06■□□□□ 0.8
Ptpre-201ENSMUST00000073961 Wdhd1P59328 1117 aa20.06■□□□□ 0.8
Ptpre-201ENSMUST00000073961 Nucb1Q02819 459 aaKnown RBP20.06■□□□□ 0.8
Ptpre-201ENSMUST00000073961 Bloc1s4Q8VED2 215 aa20.06■□□□□ 0.8
Ptpre-201ENSMUST00000073961 Fam135bQ9DAI6 1403 aa20.06■□□□□ 0.8
Ptpre-201ENSMUST00000073961 BicraF8VPZ9 1578 aa20.06■□□□□ 0.8
Ptpre-201ENSMUST00000073961 Arhgef18Q6P9R4 1021 aa20.06■□□□□ 0.8
Ptpre-201ENSMUST00000073961 Cetn1P41209 172 aa20.05■□□□□ 0.8
Ptpre-201ENSMUST00000073961 Gm45140A0A0N4SUM8 220 aa20.05■□□□□ 0.8
Retrieved 100 of 22,080 RNA–protein pairs in 20.8 ms