RNA–Protein interactions for RNA: ENSMUST00000060896.4

Col6a6-201, Transcript of Collagen alpha-6(VI) chain, mousemouse

TSL 1 (best) BASIC

Gene Col6a6, Length 3,954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6-201ENSMUST00000060896 Pdcl3Q8BVF2 240 aa8.23□□□□□ -1.09
Col6a6-201ENSMUST00000060896 Phkg2Q9DB30 406 aa8.23□□□□□ -1.09
Col6a6-201ENSMUST00000060896 Ppfia1B2RXQ2 1266 aa8.22□□□□□ -1.09
Col6a6-201ENSMUST00000060896 Vgll3P85442 326 aa8.22□□□□□ -1.09
Col6a6-201ENSMUST00000060896 Pdzrn3Q69ZS0 1063 aa8.22□□□□□ -1.09
Col6a6-201ENSMUST00000060896 Bms1Q6PGF5 1284 aaKnown RBP8.22□□□□□ -1.09
Col6a6-201ENSMUST00000060896 Pmfbp1Q9WVQ0 1022 aa8.22□□□□□ -1.09
Col6a6-201ENSMUST00000060896 Gnat3Q3V3I2 354 aa8.22□□□□□ -1.09
Col6a6-201ENSMUST00000060896 Ddx58Q6Q899 926 aa8.22□□□□□ -1.09
Col6a6-201ENSMUST00000060896 Rab3gap1Q80UJ7 981 aa8.22□□□□□ -1.09
Col6a6-201ENSMUST00000060896 PtprmP28828 1452 aa8.22□□□□□ -1.09
Col6a6-201ENSMUST00000060896 Itsn2Q9Z0R6 1659 aa8.22□□□□□ -1.09
Col6a6-201ENSMUST00000060896 Ell2Q3UKU1 639 aa8.22□□□□□ -1.09
Col6a6-201ENSMUST00000060896 Ankle2Q6P1H6 964 aa8.22□□□□□ -1.09
Col6a6-201ENSMUST00000060896 Larp6Q8BN59 492 aa8.22□□□□□ -1.09
Col6a6-201ENSMUST00000060896 Fam84aQ9D650 292 aa8.22□□□□□ -1.09
Col6a6-201ENSMUST00000060896 LlphQ9D945 130 aaKnown RBP8.22□□□□□ -1.09
Col6a6-201ENSMUST00000060896 Tpd52l1O54818 204 aa8.21□□□□□ -1.09
Col6a6-201ENSMUST00000060896 Gimap5Q8BWF2 308 aa8.21□□□□□ -1.09
Col6a6-201ENSMUST00000060896 Sugp2Q8CH09 1067 aa8.21□□□□□ -1.09
Col6a6-201ENSMUST00000060896 NgdnQ9DB96 315 aaKnown RBP8.21□□□□□ -1.09
Col6a6-201ENSMUST00000060896 Cwc25Q9DBF7 416 aa8.21□□□□□ -1.09
Col6a6-201ENSMUST00000060896 Rapgef4Q9EQZ6 1011 aa8.21□□□□□ -1.09
Col6a6-201ENSMUST00000060896 Becn1O88597 448 aa8.21□□□□□ -1.09
Col6a6-201ENSMUST00000060896 Tnni2P13412 182 aa8.21□□□□□ -1.09
Col6a6-201ENSMUST00000060896 Gtf2f1Q3THK3 508 aaKnown RBP8.21□□□□□ -1.09
Col6a6-201ENSMUST00000060896 Nlrp3Q8R4B8 1033 aa8.21□□□□□ -1.09
Col6a6-201ENSMUST00000060896 NaspQ99MD9 773 aaKnown RBP8.21□□□□□ -1.09
Col6a6-201ENSMUST00000060896 Mapk8ip1Q9WVI9 707 aa8.21□□□□□ -1.09
Col6a6-201ENSMUST00000060896 Myo5cE9Q1F5 1742 aa8.21□□□□□ -1.1
Col6a6-201ENSMUST00000060896 Trpm1Q2TV84 1622 aa8.21□□□□□ -1.1
Col6a6-201ENSMUST00000060896 Mctp1E9PV86 951 aa8.21□□□□□ -1.1
Col6a6-201ENSMUST00000060896 Atf5O70191 283 aa8.21□□□□□ -1.1
Col6a6-201ENSMUST00000060896 Bach1P97302 739 aa8.21□□□□□ -1.1
Col6a6-201ENSMUST00000060896 Ccp110Q7TSH4 1004 aa8.21□□□□□ -1.1
Col6a6-201ENSMUST00000060896 Ddrgk1Q80WW9 315 aa8.21□□□□□ -1.1
Col6a6-201ENSMUST00000060896 Trim34aQ99PP6 485 aa8.21□□□□□ -1.1
Col6a6-201ENSMUST00000060896 Klf15Q9EPW2 415 aa8.21□□□□□ -1.1
Col6a6-201ENSMUST00000060896 Elp1Q7TT37 1333 aaKnown RBP8.21□□□□□ -1.1
Col6a6-201ENSMUST00000060896 Topbp1Q6ZQF0 1515 aa8.21□□□□□ -1.1
Col6a6-201ENSMUST00000060896 Gsdma2Q32M21 443 aa8.2□□□□□ -1.1
Col6a6-201ENSMUST00000060896 Cyp7a1Q64505 503 aa8.2□□□□□ -1.1
Col6a6-201ENSMUST00000060896 Mum1Q6DID5 682 aa8.2□□□□□ -1.1
Col6a6-201ENSMUST00000060896 Bend3Q6PAL0 825 aa8.2□□□□□ -1.1
Col6a6-201ENSMUST00000060896 Lmod1Q8BVA4 595 aa8.2□□□□□ -1.1
Col6a6-201ENSMUST00000060896 Ush1cQ9ES64 910 aa8.2□□□□□ -1.1
Col6a6-201ENSMUST00000060896 Stx6Q9JKK1 255 aa8.2□□□□□ -1.1
Col6a6-201ENSMUST00000060896 Slf2Q6P9P0 1278 aa8.2□□□□□ -1.1
Col6a6-201ENSMUST00000060896 Hook1Q8BIL5 728 aa8.2□□□□□ -1.1
Col6a6-201ENSMUST00000060896 AidaQ8C4Q6 305 aa8.2□□□□□ -1.1
Col6a6-201ENSMUST00000060896 Rbm28Q8CGC6 750 aaKnown RBP8.2□□□□□ -1.1
Col6a6-201ENSMUST00000060896 Glipr1l2Q9CQ35 332 aa8.2□□□□□ -1.1
Col6a6-201ENSMUST00000060896 Rbm33Q9CXK9 1231 aaKnown RBP8.2□□□□□ -1.1
Col6a6-201ENSMUST00000060896 4933402E13RikQ9D4D2 429 aa8.2□□□□□ -1.1
Col6a6-201ENSMUST00000060896 Mroh1E0CZ22 1640 aa8.2□□□□□ -1.1
Col6a6-201ENSMUST00000060896 Cnksr1A2A9K7 700 aa8.2□□□□□ -1.1
Col6a6-201ENSMUST00000060896 Trim34bJ3QNR8 485 aa8.2□□□□□ -1.1
Col6a6-201ENSMUST00000060896 CoilQ5SU73 570 aa8.2□□□□□ -1.1
Col6a6-201ENSMUST00000060896 Ifit2Q64112 472 aa8.2□□□□□ -1.1
Col6a6-201ENSMUST00000060896 Rhot2Q8JZN7 620 aa8.2□□□□□ -1.1
Col6a6-201ENSMUST00000060896 Rapgef3Q8VCC8 918 aa8.2□□□□□ -1.1
Col6a6-201ENSMUST00000060896 4931400O07RikQ9D4M5 137 aa8.2□□□□□ -1.1
Col6a6-201ENSMUST00000060896 Eif2ak4Q9QZ05 1648 aa8.2□□□□□ -1.1
Col6a6-201ENSMUST00000060896 Ak2Q9WTP6 239 aa8.2□□□□□ -1.1
Col6a6-201ENSMUST00000060896 Akap12Q9WTQ5 1684 aa8.19□□□□□ -1.1
Col6a6-201ENSMUST00000060896 Cfap99A0A140LIX9 648 aa8.19□□□□□ -1.1
Col6a6-201ENSMUST00000060896 Cplx2P84086 134 aa8.19□□□□□ -1.1
Col6a6-201ENSMUST00000060896 Exoc5Q3TPX4 708 aa8.19□□□□□ -1.1
Col6a6-201ENSMUST00000060896 RgmbQ7TQ33 436 aa8.19□□□□□ -1.1
Col6a6-201ENSMUST00000060896 Tti2Q8BGV4 512 aa8.19□□□□□ -1.1
Col6a6-201ENSMUST00000060896 Rbm17Q8JZX4 405 aaKnown RBP8.19□□□□□ -1.1
Col6a6-201ENSMUST00000060896 Kif2cQ922S8 721 aa8.19□□□□□ -1.1
Col6a6-201ENSMUST00000060896 Kcnn1Q9EQR3 537 aa8.19□□□□□ -1.1
Col6a6-201ENSMUST00000060896 Miga2Q8BK03 593 aa8.19□□□□□ -1.1
Col6a6-201ENSMUST00000060896 Mrps27Q8BK72 415 aaKnown RBP8.19□□□□□ -1.1
Col6a6-201ENSMUST00000060896 Ncbp3Q8BZR9 615 aaKnown RBP8.19□□□□□ -1.1
Col6a6-201ENSMUST00000060896 Cdca7lQ922M5 438 aa8.19□□□□□ -1.1
Col6a6-201ENSMUST00000060896 DmtnQ9WV69 405 aa8.19□□□□□ -1.1
Col6a6-201ENSMUST00000060896 Znf335A2A5K6 1337 aa8.19□□□□□ -1.1
Col6a6-201ENSMUST00000060896 Unc5clQ6R653 518 aa8.19□□□□□ -1.1
Col6a6-201ENSMUST00000060896 Dmrt2Q8BG36 561 aa8.19□□□□□ -1.1
Col6a6-201ENSMUST00000060896 Fsd2Q8BZ52 692 aa8.19□□□□□ -1.1
Col6a6-201ENSMUST00000060896 Nup88Q8CEC0 753 aaKnown RBP8.19□□□□□ -1.1
Col6a6-201ENSMUST00000060896 Rbm19Q8R3C6 952 aaKnown RBP8.19□□□□□ -1.1
Col6a6-201ENSMUST00000060896 Erc1Q99MI1 1120 aa8.19□□□□□ -1.1
Col6a6-201ENSMUST00000060896 Tmem87bQ8BKU8 555 aa8.18□□□□□ -1.1
Col6a6-201ENSMUST00000060896 Rec8Q8C5S7 591 aa8.18□□□□□ -1.1
Col6a6-201ENSMUST00000060896 Tomm22Q9CPQ3 142 aa8.18□□□□□ -1.1
Col6a6-201ENSMUST00000060896 ZwintQ9CQU5 252 aa8.18□□□□□ -1.1
Col6a6-201ENSMUST00000060896 Mrps25Q9D125 171 aaKnown RBP8.18□□□□□ -1.1
Col6a6-201ENSMUST00000060896 PtpruB1AUH1 1446 aa8.18□□□□□ -1.1
Col6a6-201ENSMUST00000060896 Ccdc158Q8CDI6 1109 aa8.18□□□□□ -1.1
Col6a6-201ENSMUST00000060896 ZgpatQ8VDM1 511 aa8.18□□□□□ -1.1
Col6a6-201ENSMUST00000060896 Cep57l1Q8VDS7 400 aa8.18□□□□□ -1.1
Col6a6-201ENSMUST00000060896 Stk38Q91VJ4 465 aa8.18□□□□□ -1.1
Col6a6-201ENSMUST00000060896 TnmdQ9EP64 317 aa8.18□□□□□ -1.1
Col6a6-201ENSMUST00000060896 Stk36Q69ZM6 1316 aa8.18□□□□□ -1.1
Col6a6-201ENSMUST00000060896 Pde4bB1AWC9 736 aa8.18□□□□□ -1.1
Col6a6-201ENSMUST00000060896 TbcaP48428 108 aaKnown RBP8.18□□□□□ -1.1
Col6a6-201ENSMUST00000060896 SfswapQ3USH5 945 aaKnown RBP8.18□□□□□ -1.1
Retrieved 100 of 22,080 RNA–protein pairs in 31.5 ms