RNA–Protein interactions for RNA: ENSMUST00000042617.13

Clcnka-201, Transcript of Chloride channel protein ClC-Ka, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clcnka, Length 2,428 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcnka-201ENSMUST00000042617 Slx4ipQ9D7Y9 413 aa17.29■□□□□ 0.36
Clcnka-201ENSMUST00000042617 PdcQ9QW08 244 aa17.29■□□□□ 0.36
Clcnka-201ENSMUST00000042617 Add3Q9QYB5 706 aaKnown RBP17.29■□□□□ 0.36
Clcnka-201ENSMUST00000042617 Zkscan7E9PVW1 718 aa17.29■□□□□ 0.36
Clcnka-201ENSMUST00000042617 Tpd52l1O54818 204 aa17.29■□□□□ 0.36
Clcnka-201ENSMUST00000042617 Gpatch11Q3UFS4 262 aa17.29■□□□□ 0.36
Clcnka-201ENSMUST00000042617 Jakmip1Q8BVL9 626 aa17.29■□□□□ 0.36
Clcnka-201ENSMUST00000042617 Mcm3P25206 812 aaKnown RBP17.28■□□□□ 0.36
Clcnka-201ENSMUST00000042617 Zfp804bA0A0G2JGH6 1343 aa17.28■□□□□ 0.36
Clcnka-201ENSMUST00000042617 Gnai2P08752 355 aaKnown RBP17.28■□□□□ 0.36
Clcnka-201ENSMUST00000042617 Usp25P57080 1055 aa17.28■□□□□ 0.36
Clcnka-201ENSMUST00000042617 TmpoQ61033 693 aaKnown RBP17.28■□□□□ 0.36
Clcnka-201ENSMUST00000042617 Brpf3B2KF05 1204 aaKnown RBP17.27■□□□□ 0.36
Clcnka-201ENSMUST00000042617 Fyb1O35601 819 aa17.27■□□□□ 0.36
Clcnka-201ENSMUST00000042617 Mmp8O70138 465 aa17.27■□□□□ 0.36
Clcnka-201ENSMUST00000042617 CebpzP53569 1052 aaKnown RBP17.27■□□□□ 0.36
Clcnka-201ENSMUST00000042617 Ggnbp2Q5SV77 696 aa17.27■□□□□ 0.36
Clcnka-201ENSMUST00000042617 Sf3a1Q8K4Z5 791 aaKnown RBP17.27■□□□□ 0.36
Clcnka-201ENSMUST00000042617 Fam114a1Q9D281 569 aa17.27■□□□□ 0.36
Clcnka-201ENSMUST00000042617 Scn7aB1AYL1 1681 aa17.27■□□□□ 0.36
Clcnka-201ENSMUST00000042617 Srgap3Q812A2 1099 aa17.27■□□□□ 0.35
Clcnka-201ENSMUST00000042617 Wdr24Q8CFJ9 790 aa17.27■□□□□ 0.35
Clcnka-201ENSMUST00000042617 DpydQ8CHR6 1025 aa17.27■□□□□ 0.35
Clcnka-201ENSMUST00000042617 Tet3Q8BG87 1668 aa17.26■□□□□ 0.35
Clcnka-201ENSMUST00000042617 Prim1P20664 417 aa17.26■□□□□ 0.35
Clcnka-201ENSMUST00000042617 Ttc27Q8CD92 847 aa17.26■□□□□ 0.35
Clcnka-201ENSMUST00000042617 Cchcr1Q8K2I2 770 aa17.26■□□□□ 0.35
Clcnka-201ENSMUST00000042617 Zeb2Q9R0G7 1215 aa17.26■□□□□ 0.35
Clcnka-201ENSMUST00000042617 Sytl4Q9R0Q1 673 aa17.26■□□□□ 0.35
Clcnka-201ENSMUST00000042617 Cdk4P30285 303 aa17.26■□□□□ 0.35
Clcnka-201ENSMUST00000042617 Snx13Q6PHS6 957 aa17.26■□□□□ 0.35
Clcnka-201ENSMUST00000042617 Cc2d1aQ8K1A6 943 aa17.26■□□□□ 0.35
Clcnka-201ENSMUST00000042617 Ppp1r42Q8R1Z4 357 aa17.26■□□□□ 0.35
Clcnka-201ENSMUST00000042617 Eya1P97767 591 aa17.25■□□□□ 0.35
Clcnka-201ENSMUST00000042617 Ercc6lQ8BHK9 1240 aa17.25■□□□□ 0.35
Clcnka-201ENSMUST00000042617 Nup88Q8CEC0 753 aaKnown RBP17.25■□□□□ 0.35
Clcnka-201ENSMUST00000042617 Gtpbp4Q99ME9 634 aaKnown RBP17.25■□□□□ 0.35
Clcnka-201ENSMUST00000042617 Spata31d1bE9QA57 1361 aa17.25■□□□□ 0.35
Clcnka-201ENSMUST00000042617 Brpf1B2RRD7 1212 aa17.25■□□□□ 0.35
Clcnka-201ENSMUST00000042617 Ms4a1P19437 291 aa17.25■□□□□ 0.35
Clcnka-201ENSMUST00000042617 Smc3Q9CW03 1217 aaKnown RBP17.25■□□□□ 0.35
Clcnka-201ENSMUST00000042617 Ccne1Q61457 408 aa17.24■□□□□ 0.35
Clcnka-201ENSMUST00000042617 Ifi35Q9D8C4 286 aa17.24■□□□□ 0.35
Clcnka-201ENSMUST00000042617 Rad50P70388 1312 aa17.24■□□□□ 0.35
Clcnka-201ENSMUST00000042617 Atp8b2P98199 1209 aa17.23■□□□□ 0.35
Clcnka-201ENSMUST00000042617 Rufy3Q9D394 469 aa17.23■□□□□ 0.35
Clcnka-201ENSMUST00000042617 Igbp1bQ9QZ29 343 aa17.23■□□□□ 0.35
Clcnka-201ENSMUST00000042617 Tmem132aQ922P8 1018 aa17.23■□□□□ 0.35
Clcnka-201ENSMUST00000042617 Gjb2Q00977 226 aa17.22■□□□□ 0.35
Clcnka-201ENSMUST00000042617 Sv2bQ8BG39 683 aa17.22■□□□□ 0.35
Clcnka-201ENSMUST00000042617 Ddx41Q91VN6 622 aaKnown RBP17.22■□□□□ 0.35
Clcnka-201ENSMUST00000042617 Wdr33Q8K4P0 1330 aaKnown RBP17.22■□□□□ 0.35
Clcnka-201ENSMUST00000042617 Cd22P35329 862 aa17.22■□□□□ 0.35
Clcnka-201ENSMUST00000042617 Fez2Q6TYB5 348 aa17.22■□□□□ 0.35
Clcnka-201ENSMUST00000042617 Pof1bQ8K4L4 587 aa17.22■□□□□ 0.35
Clcnka-201ENSMUST00000042617 Bcl11bQ99PV8 884 aa17.22■□□□□ 0.35
Clcnka-201ENSMUST00000042617 Ubn2Q80WC1 1314 aa17.22■□□□□ 0.35
Clcnka-201ENSMUST00000042617 Mcmdc2E9Q956 681 aa17.21■□□□□ 0.35
Clcnka-201ENSMUST00000042617 Hoxc9P09633 260 aa17.21■□□□□ 0.35
Clcnka-201ENSMUST00000042617 Taf3Q5HZG4 932 aa17.21■□□□□ 0.35
Clcnka-201ENSMUST00000042617 Tpx2A2APB8 745 aaKnown RBP17.21■□□□□ 0.35
Clcnka-201ENSMUST00000042617 Ess2O70279 479 aa17.21■□□□□ 0.35
Clcnka-201ENSMUST00000042617 Syt1P46096 421 aa17.21■□□□□ 0.35
Clcnka-201ENSMUST00000042617 EappQ5BU09 281 aa17.21■□□□□ 0.35
Clcnka-201ENSMUST00000042617 Unc5clQ6R653 518 aa17.21■□□□□ 0.35
Clcnka-201ENSMUST00000042617 Hmgn5Q9JL35 406 aa17.21■□□□□ 0.35
Clcnka-201ENSMUST00000042617 Slit2Q9R1B9 1521 aa17.21■□□□□ 0.34
Clcnka-201ENSMUST00000042617 PtprvP70289 1705 aa17.2■□□□□ 0.34
Clcnka-201ENSMUST00000042617 Card6E9PWH2 1175 aa17.2■□□□□ 0.34
Clcnka-201ENSMUST00000042617 Mlh1Q9JK91 760 aa17.2■□□□□ 0.34
Clcnka-201ENSMUST00000042617 Stk36Q69ZM6 1316 aa17.2■□□□□ 0.34
Clcnka-201ENSMUST00000042617 Zscan29E9Q5B4 869 aa17.2■□□□□ 0.34
Clcnka-201ENSMUST00000042617 Zfp397Q7TNK4 527 aa17.2■□□□□ 0.34
Clcnka-201ENSMUST00000042617 Nphp3Q7TNH6 1325 aa17.2■□□□□ 0.34
Clcnka-201ENSMUST00000042617 Bach1P97302 739 aa17.19■□□□□ 0.34
Clcnka-201ENSMUST00000042617 Tmem132eQ6IEE6 982 aa17.19■□□□□ 0.34
Clcnka-201ENSMUST00000042617 Dixdc1Q80Y83 711 aa17.19■□□□□ 0.34
Clcnka-201ENSMUST00000042617 Nlrp3Q8R4B8 1033 aa17.19■□□□□ 0.34
Clcnka-201ENSMUST00000042617 Sh3bp1P55194 680 aa17.19■□□□□ 0.34
Clcnka-201ENSMUST00000042617 Rad17Q6NXW6 688 aa17.19■□□□□ 0.34
Clcnka-201ENSMUST00000042617 1700006A11RikB9EHI3 544 aa17.18■□□□□ 0.34
Clcnka-201ENSMUST00000042617 Tyro3P55144 880 aa17.18■□□□□ 0.34
Clcnka-201ENSMUST00000042617 Zkscan5Q9Z1D8 819 aa17.18■□□□□ 0.34
Clcnka-201ENSMUST00000042617 Ptpn23Q6PB44 1692 aa17.18■□□□□ 0.34
Clcnka-201ENSMUST00000042617 Hspa1lP16627 641 aa17.18■□□□□ 0.34
Clcnka-201ENSMUST00000042617 Bmp2kQ91Z96 1138 aa17.18■□□□□ 0.34
Clcnka-201ENSMUST00000042617 Add2Q9QYB8 725 aa17.18■□□□□ 0.34
Clcnka-201ENSMUST00000042617 Zbtb22Q9Z0G7 638 aa17.18■□□□□ 0.34
Clcnka-201ENSMUST00000042617 Hmx1O70218 332 aa17.17■□□□□ 0.34
Clcnka-201ENSMUST00000042617 Ano8Q6PB70 1060 aa17.17■□□□□ 0.34
Clcnka-201ENSMUST00000042617 Dzip1Q8BMD2 852 aa17.17■□□□□ 0.34
Clcnka-201ENSMUST00000042617 Ccz1Q8C1Y8 480 aa17.17■□□□□ 0.34
Clcnka-201ENSMUST00000042617 HypkQ9CR41 129 aa17.17■□□□□ 0.34
Clcnka-201ENSMUST00000042617 4930548H24RikQ9D496 437 aa17.17■□□□□ 0.34
Clcnka-201ENSMUST00000042617 Nfe2l3Q9WTM4 660 aa17.17■□□□□ 0.34
Clcnka-201ENSMUST00000042617 Larp1bA0A0A6YXJ7 370 aaKnown RBP17.17■□□□□ 0.34
Clcnka-201ENSMUST00000042617 MpndQ3TV65 487 aa17.17■□□□□ 0.34
Clcnka-201ENSMUST00000042617 CenpqQ9CPQ5 267 aa17.17■□□□□ 0.34
Clcnka-201ENSMUST00000042617 Kansl3A2RSY1 903 aaKnown RBP17.16■□□□□ 0.34
Clcnka-201ENSMUST00000042617 Smim5Q8BT42 78 aa17.16■□□□□ 0.34
Retrieved 100 of 22,080 RNA–protein pairs in 21 ms