RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Opa1P58281 960 aa19■□□□□ 0.63
Ccdc88a-201ENSMUST00000040182 Hmgb1P63158 215 aaKnown RBP19■□□□□ 0.63
Ccdc88a-201ENSMUST00000040182 Baiap2l1Q9DBJ3 514 aa19■□□□□ 0.63
Ccdc88a-201ENSMUST00000040182 Krt79Q8VED5 531 aa19■□□□□ 0.63
Ccdc88a-201ENSMUST00000040182 Cep120Q7TSG1 988 aa18.99■□□□□ 0.63
Ccdc88a-201ENSMUST00000040182 Ano2Q8CFW1 1002 aa18.99■□□□□ 0.63
Ccdc88a-201ENSMUST00000040182 Sept11Q8C1B7 431 aaKnown RBP18.99■□□□□ 0.63
Ccdc88a-201ENSMUST00000040182 Elp1Q7TT37 1333 aaKnown RBP18.99■□□□□ 0.63
Ccdc88a-201ENSMUST00000040182 Gm28919A0A087WP35 240 aa18.99■□□□□ 0.63
Ccdc88a-201ENSMUST00000040182 Ift74Q8BKE9 600 aa18.99■□□□□ 0.63
Ccdc88a-201ENSMUST00000040182 Gbp2Q9Z0E6 589 aa18.99■□□□□ 0.63
Ccdc88a-201ENSMUST00000040182 Cbfa2t2O70374 594 aa18.98■□□□□ 0.63
Ccdc88a-201ENSMUST00000040182 Map3k13Q1HKZ5 959 aa18.98■□□□□ 0.63
Ccdc88a-201ENSMUST00000040182 Map3k5O35099 1380 aa18.98■□□□□ 0.63
Ccdc88a-201ENSMUST00000040182 Mnat1P51949 309 aa18.98■□□□□ 0.63
Ccdc88a-201ENSMUST00000040182 Cpa2Q504N0 417 aa18.98■□□□□ 0.63
Ccdc88a-201ENSMUST00000040182 Znf526Q8BI66 675 aa18.98■□□□□ 0.63
Ccdc88a-201ENSMUST00000040182 Tmem266Q8BZB3 538 aa18.98■□□□□ 0.63
Ccdc88a-201ENSMUST00000040182 Spa17Q62252 149 aa18.98■□□□□ 0.63
Ccdc88a-201ENSMUST00000040182 Ccdc148Q6P5U8 527 aa18.98■□□□□ 0.63
Ccdc88a-201ENSMUST00000040182 Top1Q04750 767 aaKnown RBP18.98■□□□□ 0.63
Ccdc88a-201ENSMUST00000040182 Lman1Q9D0F3 517 aa18.98■□□□□ 0.63
Ccdc88a-201ENSMUST00000040182 TmpoQ61033 693 aaKnown RBP18.98■□□□□ 0.63
Ccdc88a-201ENSMUST00000040182 Hdhd2Q3UGR5 259 aa18.97■□□□□ 0.63
Ccdc88a-201ENSMUST00000040182 SlmapQ3URD3 845 aa18.97■□□□□ 0.63
Ccdc88a-201ENSMUST00000040182 Rassf2Q8BMS9 326 aa18.97■□□□□ 0.63
Ccdc88a-201ENSMUST00000040182 Ccdc12Q8R344 166 aaKnown RBP18.97■□□□□ 0.63
Ccdc88a-201ENSMUST00000040182 Caprin2Q05A80 1031 aaKnown RBP18.97■□□□□ 0.63
Ccdc88a-201ENSMUST00000040182 Sdc2P43407 202 aa18.97■□□□□ 0.63
Ccdc88a-201ENSMUST00000040182 Igf2bp2Q5SF07 592 aaKnown RBP18.97■□□□□ 0.63
Ccdc88a-201ENSMUST00000040182 Syap1Q9D5V6 365 aa18.97■□□□□ 0.63
Ccdc88a-201ENSMUST00000040182 Hip1rQ9JKY5 1068 aa18.97■□□□□ 0.63
Ccdc88a-201ENSMUST00000040182 Ttc21bQ0HA38 1315 aa18.97■□□□□ 0.63
Ccdc88a-201ENSMUST00000040182 Srgap1Q91Z69 1062 aa18.97■□□□□ 0.63
Ccdc88a-201ENSMUST00000040182 PrxO55103 1391 aa18.97■□□□□ 0.63
Ccdc88a-201ENSMUST00000040182 Calcoco1Q8CGU1 691 aa18.96■□□□□ 0.63
Ccdc88a-201ENSMUST00000040182 Clip2Q9Z0H8 1047 aa18.96■□□□□ 0.63
Ccdc88a-201ENSMUST00000040182 Kif1bQ60575 1816 aaKnown RBP18.96■□□□□ 0.63
Ccdc88a-201ENSMUST00000040182 Pkd2l2Q9JLG4 621 aa18.96■□□□□ 0.63
Ccdc88a-201ENSMUST00000040182 Speer4aF8VPX6 267 aa18.96■□□□□ 0.63
Ccdc88a-201ENSMUST00000040182 Tnni2P13412 182 aa18.96■□□□□ 0.63
Ccdc88a-201ENSMUST00000040182 SltmQ8CH25 1031 aaKnown RBP18.96■□□□□ 0.63
Ccdc88a-201ENSMUST00000040182 Ppp1r42Q8R1Z4 357 aa18.96■□□□□ 0.63
Ccdc88a-201ENSMUST00000040182 DonsonQ9QXP4 560 aa18.96■□□□□ 0.63
Ccdc88a-201ENSMUST00000040182 Ube3aO08759 870 aa18.95■□□□□ 0.62
Ccdc88a-201ENSMUST00000040182 Cfap57Q9D180 1249 aa18.95■□□□□ 0.62
Ccdc88a-201ENSMUST00000040182 NgdnQ9DB96 315 aaKnown RBP18.95■□□□□ 0.62
Ccdc88a-201ENSMUST00000040182 Atp8b3Q6UQ17 1335 aa18.95■□□□□ 0.62
Ccdc88a-201ENSMUST00000040182 NmiO35309 314 aa18.95■□□□□ 0.62
Ccdc88a-201ENSMUST00000040182 Gbp7Q91Z40 638 aa18.95■□□□□ 0.62
Ccdc88a-201ENSMUST00000040182 Syce1Q9D495 329 aa18.95■□□□□ 0.62
Ccdc88a-201ENSMUST00000040182 Gm14025A2AP89 1413 aa18.95■□□□□ 0.62
Ccdc88a-201ENSMUST00000040182 Rbm33Q9CXK9 1231 aaKnown RBP18.95■□□□□ 0.62
Ccdc88a-201ENSMUST00000040182 NpcdF8VQB8 469 aa18.95■□□□□ 0.62
Ccdc88a-201ENSMUST00000040182 GlmnQ8BZM1 596 aa18.95■□□□□ 0.62
Ccdc88a-201ENSMUST00000040182 Prkar2bP31324 416 aa18.95■□□□□ 0.62
Ccdc88a-201ENSMUST00000040182 Gng11P61953 73 aa18.94■□□□□ 0.62
Ccdc88a-201ENSMUST00000040182 Vps37cQ8R105 352 aa18.94■□□□□ 0.62
Ccdc88a-201ENSMUST00000040182 Dync1i1O88485 628 aa18.94■□□□□ 0.62
Ccdc88a-201ENSMUST00000040182 Rapgef3Q8VCC8 918 aa18.94■□□□□ 0.62
Ccdc88a-201ENSMUST00000040182 Ccdc121E9Q6D3 323 aa18.94■□□□□ 0.62
Ccdc88a-201ENSMUST00000040182 Kiaa1211Q5PR69 1207 aa18.94■□□□□ 0.62
Ccdc88a-201ENSMUST00000040182 Ccdc66Q6NS45 935 aa18.94■□□□□ 0.62
Ccdc88a-201ENSMUST00000040182 Specc1Q5SXY1 1067 aa18.94■□□□□ 0.62
Ccdc88a-201ENSMUST00000040182 Bag3Q9JLV1 577 aaKnown RBP18.94■□□□□ 0.62
Ccdc88a-201ENSMUST00000040182 Gcc2Q8CHG3 1679 aa18.94■□□□□ 0.62
Ccdc88a-201ENSMUST00000040182 Krt15Q61414 452 aa18.94■□□□□ 0.62
Ccdc88a-201ENSMUST00000040182 Caskin1Q6P9K8 1431 aa18.94■□□□□ 0.62
Ccdc88a-201ENSMUST00000040182 Gapvd1Q6PAR5 1458 aa18.94■□□□□ 0.62
Ccdc88a-201ENSMUST00000040182 Fam163aQ8CAA5 168 aa18.94■□□□□ 0.62
Ccdc88a-201ENSMUST00000040182 Ercc3P49135 783 aa18.94■□□□□ 0.62
Ccdc88a-201ENSMUST00000040182 Fam76aQ922G2 307 aa18.94■□□□□ 0.62
Ccdc88a-201ENSMUST00000040182 Tnip1Q9WUU8 647 aa18.94■□□□□ 0.62
Ccdc88a-201ENSMUST00000040182 Pde4dQ01063 747 aa18.93■□□□□ 0.62
Ccdc88a-201ENSMUST00000040182 Tbc1d32Q3URV1 1296 aa18.93■□□□□ 0.62
Ccdc88a-201ENSMUST00000040182 Gtf3c5Q8R2T8 520 aa18.93■□□□□ 0.62
Ccdc88a-201ENSMUST00000040182 Cep19Q9CQA8 163 aa18.93■□□□□ 0.62
Ccdc88a-201ENSMUST00000040182 Ccdc122Q8BVN0 290 aa18.93■□□□□ 0.62
Ccdc88a-201ENSMUST00000040182 Ces1aE9PYP1 563 aa18.93■□□□□ 0.62
Ccdc88a-201ENSMUST00000040182 Mcm3P25206 812 aaKnown RBP18.93■□□□□ 0.62
Ccdc88a-201ENSMUST00000040182 Rrs1Q9CYH6 365 aaKnown RBP18.93■□□□□ 0.62
Ccdc88a-201ENSMUST00000040182 GpkowQ56A08 488 aa18.92■□□□□ 0.62
Ccdc88a-201ENSMUST00000040182 Yeats4Q9CR11 227 aaKnown RBP18.92■□□□□ 0.62
Ccdc88a-201ENSMUST00000040182 Ak9G3UYQ4 1894 aa18.92■□□□□ 0.62
Ccdc88a-201ENSMUST00000040182 Ccdc129Q14B48 1034 aa18.92■□□□□ 0.62
Ccdc88a-201ENSMUST00000040182 Bicd1Q8BR07 835 aa18.92■□□□□ 0.62
Ccdc88a-201ENSMUST00000040182 ZfxP17012 799 aa18.92■□□□□ 0.62
Ccdc88a-201ENSMUST00000040182 Znf692Q3U381 531 aa18.92■□□□□ 0.62
Ccdc88a-201ENSMUST00000040182 Mmel1Q9JLI3 765 aa18.92■□□□□ 0.62
Ccdc88a-201ENSMUST00000040182 Ccdc6D3YZP9 469 aa18.92■□□□□ 0.62
Ccdc88a-201ENSMUST00000040182 Terf2O35144 541 aa18.92■□□□□ 0.62
Ccdc88a-201ENSMUST00000040182 Gm28510A0A087WP28 240 aa18.92■□□□□ 0.62
Ccdc88a-201ENSMUST00000040182 Magi1Q6RHR9 1471 aa18.91■□□□□ 0.62
Ccdc88a-201ENSMUST00000040182 Atp2a2O55143 1044 aaKnown RBP18.91■□□□□ 0.62
Ccdc88a-201ENSMUST00000040182 Camk4P08414 469 aa18.91■□□□□ 0.62
Ccdc88a-201ENSMUST00000040182 Dhx9O70133 1380 aaKnown RBP18.91■□□□□ 0.62
Ccdc88a-201ENSMUST00000040182 Dact3Q0PHV7 610 aa18.91■□□□□ 0.62
Ccdc88a-201ENSMUST00000040182 Prpf40aQ9R1C7 953 aaKnown RBP18.91■□□□□ 0.62
Ccdc88a-201ENSMUST00000040182 Znf394Q9Z1D9 521 aa18.91■□□□□ 0.62
Ccdc88a-201ENSMUST00000040182 Ncoa1P70365 1447 aa18.91■□□□□ 0.62
Retrieved 100 of 22,080 RNA–protein pairs in 12.4 ms