RNA–Protein interactions for RNA: ENSMUST00000039443.13

Ccdc50-201, Transcript of Coiled-coil domain-containing protein 50, mousemouse

TSL 1 (best) BASIC

Gene Ccdc50, Length 2,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc50-201ENSMUST00000039443 Gimap5Q8BWF2 308 aa22.8■■□□□ 1.24
Ccdc50-201ENSMUST00000039443 Echdc1Q9D9V3 322 aa22.8■■□□□ 1.24
Ccdc50-201ENSMUST00000039443 Pof1bQ8K4L4 587 aa22.8■■□□□ 1.24
Ccdc50-201ENSMUST00000039443 Zfp804bA0A0G2JGH6 1343 aa22.79■■□□□ 1.24
Ccdc50-201ENSMUST00000039443 Ano8Q6PB70 1060 aa22.79■■□□□ 1.24
Ccdc50-201ENSMUST00000039443 Tceal9Q9DD24 104 aa22.79■■□□□ 1.24
Ccdc50-201ENSMUST00000039443 Igbp1bQ9QZ29 343 aa22.79■■□□□ 1.24
Ccdc50-201ENSMUST00000039443 Cspp1B2RX88 1205 aa22.78■■□□□ 1.24
Ccdc50-201ENSMUST00000039443 Irf5P56477 497 aa22.78■■□□□ 1.24
Ccdc50-201ENSMUST00000039443 Pcmtd1P59913 357 aa22.78■■□□□ 1.24
Ccdc50-201ENSMUST00000039443 Samm50Q8BGH2 469 aa22.78■■□□□ 1.24
Ccdc50-201ENSMUST00000039443 Cyp2d11P24457 504 aa22.77■■□□□ 1.24
Ccdc50-201ENSMUST00000039443 Slc4a10Q5DTL9 1118 aa22.77■■□□□ 1.24
Ccdc50-201ENSMUST00000039443 Tti2Q8BGV4 512 aa22.77■■□□□ 1.24
Ccdc50-201ENSMUST00000039443 Brf1Q8CFK2 676 aa22.77■■□□□ 1.24
Ccdc50-201ENSMUST00000039443 Grpel1Q99LP6 217 aa22.77■■□□□ 1.24
Ccdc50-201ENSMUST00000039443 Q9D9S1 216 aa22.77■■□□□ 1.24
Ccdc50-201ENSMUST00000039443 MsnP26041 577 aaKnown RBP22.77■■□□□ 1.24
Ccdc50-201ENSMUST00000039443 Bend3Q6PAL0 825 aa22.77■■□□□ 1.24
Ccdc50-201ENSMUST00000039443 Nol12Q8BG17 217 aa22.77■■□□□ 1.24
Ccdc50-201ENSMUST00000039443 NaspQ99MD9 773 aaKnown RBP22.77■■□□□ 1.24
Ccdc50-201ENSMUST00000039443 Amotl1Q9D4H4 968 aa22.77■■□□□ 1.24
Ccdc50-201ENSMUST00000039443 Stk3Q9JI10 497 aa22.77■■□□□ 1.24
Ccdc50-201ENSMUST00000039443 Abcc12Q80WJ6 1366 aa22.76■■□□□ 1.23
Ccdc50-201ENSMUST00000039443 BcorQ8CGN4 1759 aa22.76■■□□□ 1.23
Ccdc50-201ENSMUST00000039443 Ncbp1Q3UYV9 790 aaKnown RBP22.76■■□□□ 1.23
Ccdc50-201ENSMUST00000039443 Mx2Q9WVP9 655 aa22.76■■□□□ 1.23
Ccdc50-201ENSMUST00000039443 Nup88Q8CEC0 753 aaKnown RBP22.76■■□□□ 1.23
Ccdc50-201ENSMUST00000039443 Nup153E9Q3G8 1462 aaKnown RBP22.75■■□□□ 1.23
Ccdc50-201ENSMUST00000039443 Cfap73J3QPZ5 306 aa22.75■■□□□ 1.23
Ccdc50-201ENSMUST00000039443 Ddx11Q6AXC6 880 aa22.75■■□□□ 1.23
Ccdc50-201ENSMUST00000039443 Utp3Q9JI13 469 aaKnown RBP22.75■■□□□ 1.23
Ccdc50-201ENSMUST00000039443 Eif3aP23116 1344 aaKnown RBP22.75■■□□□ 1.23
Ccdc50-201ENSMUST00000039443 Nckap5lQ6GQX2 1323 aa22.75■■□□□ 1.23
Ccdc50-201ENSMUST00000039443 Tnnt1O88346 262 aa22.74■■□□□ 1.23
Ccdc50-201ENSMUST00000039443 Ifit2Q64112 472 aa22.74■■□□□ 1.23
Ccdc50-201ENSMUST00000039443 Slc35g1Q8BY79 368 aa22.74■■□□□ 1.23
Ccdc50-201ENSMUST00000039443 Sf3a1Q8K4Z5 791 aaKnown RBP22.74■■□□□ 1.23
Ccdc50-201ENSMUST00000039443 Adam1bQ8R534 806 aa22.74■■□□□ 1.23
Ccdc50-201ENSMUST00000039443 Fyb1O35601 819 aa22.73■■□□□ 1.23
Ccdc50-201ENSMUST00000039443 Eif4a1P60843 406 aaKnown RBP22.73■■□□□ 1.23
Ccdc50-201ENSMUST00000039443 Nucb2P81117 420 aa22.73■■□□□ 1.23
Ccdc50-201ENSMUST00000039443 Inpp5bQ8K337 993 aa22.73■■□□□ 1.23
Ccdc50-201ENSMUST00000039443 Tom1O88746 492 aa22.73■■□□□ 1.23
Ccdc50-201ENSMUST00000039443 SnrkQ8VDU5 748 aa22.73■■□□□ 1.23
Ccdc50-201ENSMUST00000039443 Abcc4E9Q236 1325 aa22.73■■□□□ 1.23
Ccdc50-201ENSMUST00000039443 Atp8b3Q6UQ17 1335 aa22.73■■□□□ 1.23
Ccdc50-201ENSMUST00000039443 Gm973E9Q295 1059 aa22.72■■□□□ 1.23
Ccdc50-201ENSMUST00000039443 Kdm6aO70546 1401 aa22.72■■□□□ 1.23
Ccdc50-201ENSMUST00000039443 Cfap157Q0VFX2 523 aa22.72■■□□□ 1.23
Ccdc50-201ENSMUST00000039443 Ddx17Q501J6 650 aaKnown RBP22.72■■□□□ 1.23
Ccdc50-201ENSMUST00000039443 Sgsm2Q80U12 1005 aa22.72■■□□□ 1.23
Ccdc50-201ENSMUST00000039443 Aox1O54754 1333 aa22.72■■□□□ 1.23
Ccdc50-201ENSMUST00000039443 Wdr33Q8K4P0 1330 aaKnown RBP22.72■■□□□ 1.23
Ccdc50-201ENSMUST00000039443 Zap70P43404 618 aa22.72■■□□□ 1.23
Ccdc50-201ENSMUST00000039443 Nap1l3Q794H2 544 aa22.72■■□□□ 1.23
Ccdc50-201ENSMUST00000039443 Ttc27Q8CD92 847 aa22.72■■□□□ 1.23
Ccdc50-201ENSMUST00000039443 Ptgs1P22437 602 aa22.71■■□□□ 1.23
Ccdc50-201ENSMUST00000039443 Taf5lQ91WQ5 589 aa22.71■■□□□ 1.23
Ccdc50-201ENSMUST00000039443 Kcnb2A6H8H5 907 aa22.7■■□□□ 1.23
Ccdc50-201ENSMUST00000039443 Cfdp1O88271 295 aaKnown RBP22.7■■□□□ 1.23
Ccdc50-201ENSMUST00000039443 Tlr7P58681 1050 aa22.7■■□□□ 1.23
Ccdc50-201ENSMUST00000039443 Wdr24Q8CFJ9 790 aa22.7■■□□□ 1.23
Ccdc50-201ENSMUST00000039443 Mmel1Q9JLI3 765 aa22.7■■□□□ 1.23
Ccdc50-201ENSMUST00000039443 Irx4Q9QY61 515 aa22.7■■□□□ 1.22
Ccdc50-201ENSMUST00000039443 TimelessQ9R1X4 1197 aa22.7■■□□□ 1.22
Ccdc50-201ENSMUST00000039443 DpydQ8CHR6 1025 aa22.69■■□□□ 1.22
Ccdc50-201ENSMUST00000039443 Psma5Q9Z2U1 241 aaKnown RBP22.69■■□□□ 1.22
Ccdc50-201ENSMUST00000039443 Zkscan7E9PVW1 718 aa22.69■■□□□ 1.22
Ccdc50-201ENSMUST00000039443 Ccdc94Q9D6J3 314 aa22.69■■□□□ 1.22
Ccdc50-201ENSMUST00000039443 Add3Q9QYB5 706 aaKnown RBP22.69■■□□□ 1.22
Ccdc50-201ENSMUST00000039443 Cavin1O54724 392 aa22.68■■□□□ 1.22
Ccdc50-201ENSMUST00000039443 Usp25P57080 1055 aa22.68■■□□□ 1.22
Ccdc50-201ENSMUST00000039443 Fam228bQ497Q6 232 aa22.68■■□□□ 1.22
Ccdc50-201ENSMUST00000039443 PsapQ61207 557 aaKnown RBP22.68■■□□□ 1.22
Ccdc50-201ENSMUST00000039443 Oxsr1Q6P9R2 527 aa22.68■■□□□ 1.22
Ccdc50-201ENSMUST00000039443 Plcd3Q8K2J0 785 aa22.68■■□□□ 1.22
Ccdc50-201ENSMUST00000039443 Spata31d1bE9QA57 1361 aa22.68■■□□□ 1.22
Ccdc50-201ENSMUST00000039443 Usp48Q3V0C5 1052 aa22.67■■□□□ 1.22
Ccdc50-201ENSMUST00000039443 Mphosph10Q810V0 681 aaKnown RBP22.67■■□□□ 1.22
Ccdc50-201ENSMUST00000039443 Naa30Q8CES0 364 aa22.67■■□□□ 1.22
Ccdc50-201ENSMUST00000039443 Nop14Q8R3N1 860 aaKnown RBP22.67■■□□□ 1.22
Ccdc50-201ENSMUST00000039443 Adcy9P51830 1353 aa22.67■■□□□ 1.22
Ccdc50-201ENSMUST00000039443 Exoc6bA6H5Z3 810 aa22.67■■□□□ 1.22
Ccdc50-201ENSMUST00000039443 Mcm3P25206 812 aaKnown RBP22.67■■□□□ 1.22
Ccdc50-201ENSMUST00000039443 Ppp6r1Q7TSI3 856 aa22.67■■□□□ 1.22
Ccdc50-201ENSMUST00000039443 Dmrt2Q8BG36 561 aa22.67■■□□□ 1.22
Ccdc50-201ENSMUST00000039443 Tubb6Q922F4 447 aa22.67■■□□□ 1.22
Ccdc50-201ENSMUST00000039443 Mad1l1Q9WTX8 717 aaKnown RBP22.67■■□□□ 1.22
Ccdc50-201ENSMUST00000039443 Col1a2Q01149 1372 aa22.67■■□□□ 1.22
Ccdc50-201ENSMUST00000039443 Eef2kO08796 724 aa22.66■■□□□ 1.22
Ccdc50-201ENSMUST00000039443 Gimap6Q8K349 305 aa22.66■■□□□ 1.22
Ccdc50-201ENSMUST00000039443 Atp10bB1AWN4 1474 aa22.66■■□□□ 1.22
Ccdc50-201ENSMUST00000039443 Hmgn5Q9JL35 406 aa22.66■■□□□ 1.22
Ccdc50-201ENSMUST00000039443 Rnf20Q5DTM8 973 aa22.65■■□□□ 1.22
Ccdc50-201ENSMUST00000039443 Bmp2kQ91Z96 1138 aa22.65■■□□□ 1.22
Ccdc50-201ENSMUST00000039443 Nid2O88322 1403 aa22.65■■□□□ 1.22
Ccdc50-201ENSMUST00000039443 Rbm8a2A0A0N4SUH6 174 aa22.65■■□□□ 1.22
Ccdc50-201ENSMUST00000039443 Cd22P35329 862 aa22.65■■□□□ 1.22
Ccdc50-201ENSMUST00000039443 Leo1Q5XJE5 667 aa22.65■■□□□ 1.22
Retrieved 100 of 22,080 RNA–protein pairs in 14.4 ms