RNA–Protein interactions for RNA: ENSMUST00000033012.8

Copb1-201, Transcript of Coatomer subunit beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Copb1, Length 3,346 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Copb1-201ENSMUST00000033012 Atp2b1G5E829 1220 aa11.81□□□□□ -0.52
Copb1-201ENSMUST00000033012 L1td1Q587J6 782 aaKnown RBP11.81□□□□□ -0.52
Copb1-201ENSMUST00000033012 Efcab8Q8C9R9 203 aa11.81□□□□□ -0.52
Copb1-201ENSMUST00000033012 Kif1bQ60575 1816 aaKnown RBP11.81□□□□□ -0.52
Copb1-201ENSMUST00000033012 Plxnc1Q9QZC2 1574 aa11.81□□□□□ -0.52
Copb1-201ENSMUST00000033012 Evi5lH3BKQ3 813 aa11.81□□□□□ -0.52
Copb1-201ENSMUST00000033012 Mcm6P97311 821 aa11.81□□□□□ -0.52
Copb1-201ENSMUST00000033012 Prune1Q8BIW1 454 aa11.81□□□□□ -0.52
Copb1-201ENSMUST00000033012 Slx4ipQ9D7Y9 413 aa11.81□□□□□ -0.52
Copb1-201ENSMUST00000033012 Rims1Q99NE5 1463 aa11.81□□□□□ -0.52
Copb1-201ENSMUST00000033012 Pdcd11Q6NS46 1862 aaKnown RBP11.81□□□□□ -0.52
Copb1-201ENSMUST00000033012 Uggt1Q6P5E4 1551 aa11.81□□□□□ -0.52
Copb1-201ENSMUST00000033012 MaddQ80U28 1577 aa11.81□□□□□ -0.52
Copb1-201ENSMUST00000033012 Cep89Q9CZX2 791 aa11.81□□□□□ -0.52
Copb1-201ENSMUST00000033012 Sall3Q62255 1320 aa11.8□□□□□ -0.52
Copb1-201ENSMUST00000033012 Ccdc121E9Q6D3 323 aa11.8□□□□□ -0.52
Copb1-201ENSMUST00000033012 Samsn1P57725 372 aa11.8□□□□□ -0.52
Copb1-201ENSMUST00000033012 Pwp2Q8BU03 919 aaKnown RBP11.8□□□□□ -0.52
Copb1-201ENSMUST00000033012 Tshz3Q8CGV9 1081 aa11.8□□□□□ -0.52
Copb1-201ENSMUST00000033012 Smc3Q9CW03 1217 aaKnown RBP11.8□□□□□ -0.52
Copb1-201ENSMUST00000033012 ChmQ9QXG2 665 aa11.8□□□□□ -0.52
Copb1-201ENSMUST00000033012 Actn3O88990 900 aaKnown RBP11.8□□□□□ -0.52
Copb1-201ENSMUST00000033012 Ttll12Q3UDE2 639 aa11.8□□□□□ -0.52
Copb1-201ENSMUST00000033012 Polr3gQ6NXY9 223 aa11.8□□□□□ -0.52
Copb1-201ENSMUST00000033012 Q8BT18 775 aa11.8□□□□□ -0.52
Copb1-201ENSMUST00000033012 Q8VDP2 222 aa11.8□□□□□ -0.52
Copb1-201ENSMUST00000033012 GzmnQ920S1 248 aa11.8□□□□□ -0.52
Copb1-201ENSMUST00000033012 Lonp2Q9DBN5 852 aa11.8□□□□□ -0.52
Copb1-201ENSMUST00000033012 ShprhQ7TPQ3 1674 aa11.8□□□□□ -0.52
Copb1-201ENSMUST00000033012 Aox4Q3TYQ9 1336 aa11.8□□□□□ -0.52
Copb1-201ENSMUST00000033012 Ms4a2P20490 235 aa11.8□□□□□ -0.52
Copb1-201ENSMUST00000033012 Tubb4aQ9D6F9 444 aa11.8□□□□□ -0.52
Copb1-201ENSMUST00000033012 Nrxn1Q9CS84 1514 aa11.79□□□□□ -0.52
Copb1-201ENSMUST00000033012 Irx1P81068 480 aa11.79□□□□□ -0.52
Copb1-201ENSMUST00000033012 Lins1Q3U1D0 764 aa11.79□□□□□ -0.52
Copb1-201ENSMUST00000033012 Tada3Q8R0L9 432 aa11.79□□□□□ -0.52
Copb1-201ENSMUST00000033012 Ndufa8Q9DCJ5 172 aa11.79□□□□□ -0.52
Copb1-201ENSMUST00000033012 Bcar3Q9QZK2 820 aa11.79□□□□□ -0.52
Copb1-201ENSMUST00000033012 CalcaP70160 136 aa11.79□□□□□ -0.52
Copb1-201ENSMUST00000033012 Ccdc102aQ3TMW1 549 aa11.79□□□□□ -0.52
Copb1-201ENSMUST00000033012 Esyt1Q3U7R1 1092 aaKnown RBP11.79□□□□□ -0.52
Copb1-201ENSMUST00000033012 Q8CEZ4 452 aa11.79□□□□□ -0.52
Copb1-201ENSMUST00000033012 Frat2Q8K025 231 aa11.79□□□□□ -0.52
Copb1-201ENSMUST00000033012 Ccdc83Q9D4V3 305 aa11.79□□□□□ -0.52
Copb1-201ENSMUST00000033012 Zcchc17Q9ESX4 241 aaKnown RBP11.79□□□□□ -0.52
Copb1-201ENSMUST00000033012 Efcab6Q6P1E8 1516 aa11.79□□□□□ -0.52
Copb1-201ENSMUST00000033012 Znf568E9PYI1 671 aa11.78□□□□□ -0.52
Copb1-201ENSMUST00000033012 Srpk2O54781 681 aaKnown RBP11.78□□□□□ -0.52
Copb1-201ENSMUST00000033012 Slu7Q8BHJ9 585 aa11.78□□□□□ -0.52
Copb1-201ENSMUST00000033012 Osbpl5Q9ER64 874 aa11.78□□□□□ -0.52
Copb1-201ENSMUST00000033012 Atp8b3Q6UQ17 1335 aa11.78□□□□□ -0.52
Copb1-201ENSMUST00000033012 Fan1Q69ZT1 1020 aa11.78□□□□□ -0.52
Copb1-201ENSMUST00000033012 Ppp2r3dQ9Z176 491 aa11.78□□□□□ -0.52
Copb1-201ENSMUST00000033012 Dnai2A2AC93 623 aa11.78□□□□□ -0.52
Copb1-201ENSMUST00000033012 Mctp1E9PV86 951 aa11.78□□□□□ -0.52
Copb1-201ENSMUST00000033012 Jakmip1Q8BVL9 626 aa11.78□□□□□ -0.52
Copb1-201ENSMUST00000033012 Tmem87aQ8BXN9 555 aa11.78□□□□□ -0.52
Copb1-201ENSMUST00000033012 Gdap1l1Q8VE33 370 aa11.78□□□□□ -0.52
Copb1-201ENSMUST00000033012 Rufy3Q9D394 469 aa11.78□□□□□ -0.52
Copb1-201ENSMUST00000033012 Abca8aQ8K442 1620 aa11.78□□□□□ -0.52
Copb1-201ENSMUST00000033012 Ccdc114Q3UX62 658 aa11.77□□□□□ -0.52
Copb1-201ENSMUST00000033012 Ano10Q8BH79 659 aa11.77□□□□□ -0.52
Copb1-201ENSMUST00000033012 Ric3Q8BPM6 367 aa11.77□□□□□ -0.52
Copb1-201ENSMUST00000033012 Brms1Q99N20 246 aa11.77□□□□□ -0.52
Copb1-201ENSMUST00000033012 Mis12Q9CY25 206 aa11.77□□□□□ -0.52
Copb1-201ENSMUST00000033012 Coro7Q9D2V7 922 aa11.77□□□□□ -0.52
Copb1-201ENSMUST00000033012 Mad1l1Q9WTX8 717 aaKnown RBP11.77□□□□□ -0.52
Copb1-201ENSMUST00000033012 Sh3bp5Q9Z131 463 aa11.77□□□□□ -0.52
Copb1-201ENSMUST00000033012 Rgs12Q8CGE9 1381 aa11.77□□□□□ -0.53
Copb1-201ENSMUST00000033012 Nap1l3Q794H2 544 aa11.77□□□□□ -0.53
Copb1-201ENSMUST00000033012 Pof1bQ8K4L4 587 aa11.77□□□□□ -0.53
Copb1-201ENSMUST00000033012 Kcnk13Q8R1P5 405 aa11.77□□□□□ -0.53
Copb1-201ENSMUST00000033012 Fam76aQ922G2 307 aa11.77□□□□□ -0.53
Copb1-201ENSMUST00000033012 Jakmip2D3YXK0 820 aa11.76□□□□□ -0.53
Copb1-201ENSMUST00000033012 Syt1P46096 421 aa11.76□□□□□ -0.53
Copb1-201ENSMUST00000033012 Uri1Q3TLD5 531 aa11.76□□□□□ -0.53
Copb1-201ENSMUST00000033012 Babam1Q3UI43 333 aa11.76□□□□□ -0.53
Copb1-201ENSMUST00000033012 Noc3lQ8VI84 807 aaKnown RBP11.76□□□□□ -0.53
Copb1-201ENSMUST00000033012 Stk3Q9JI10 497 aa11.76□□□□□ -0.53
Copb1-201ENSMUST00000033012 Ankrd35E9Q9D8 996 aa11.76□□□□□ -0.53
Copb1-201ENSMUST00000033012 Hsp90b1P08113 802 aaKnown RBP11.76□□□□□ -0.53
Copb1-201ENSMUST00000033012 Nap1l1P28656 391 aaKnown RBP11.76□□□□□ -0.53
Copb1-201ENSMUST00000033012 Fchsd2Q3USJ8 740 aa11.76□□□□□ -0.53
Copb1-201ENSMUST00000033012 Ctnna3Q65CL1 895 aa11.76□□□□□ -0.53
Copb1-201ENSMUST00000033012 Phf23Q8BSN5 401 aa11.76□□□□□ -0.53
Copb1-201ENSMUST00000033012 Sh2b1Q91ZM2 756 aa11.76□□□□□ -0.53
Copb1-201ENSMUST00000033012 NaspQ99MD9 773 aaKnown RBP11.76□□□□□ -0.53
Copb1-201ENSMUST00000033012 Ubl4bQ9CQ84 188 aa11.76□□□□□ -0.53
Copb1-201ENSMUST00000033012 Usp54Q8BL06 1588 aaKnown RBP11.76□□□□□ -0.53
Copb1-201ENSMUST00000033012 Smc2Q8CG48 1191 aaKnown RBP11.76□□□□□ -0.53
Copb1-201ENSMUST00000033012 Abca17E9PX95 1733 aa11.76□□□□□ -0.53
Copb1-201ENSMUST00000033012 Kif20bQ80WE4 1774 aaKnown RBP11.76□□□□□ -0.53
Copb1-201ENSMUST00000033012 Gnai1B2RSH2 354 aa11.75□□□□□ -0.53
Copb1-201ENSMUST00000033012 Smarcc2Q6PDG5 1213 aa11.75□□□□□ -0.53
Copb1-201ENSMUST00000033012 Cfap69Q8BH53 942 aa11.75□□□□□ -0.53
Copb1-201ENSMUST00000033012 Vps18Q8R307 973 aa11.75□□□□□ -0.53
Copb1-201ENSMUST00000033012 Gnai3Q9DC51 354 aa11.75□□□□□ -0.53
Copb1-201ENSMUST00000033012 Synj2Q9D2G5 1434 aa11.75□□□□□ -0.53
Copb1-201ENSMUST00000033012 Ccdc66Q6NS45 935 aa11.75□□□□□ -0.53
Copb1-201ENSMUST00000033012 Ptpdc1Q6NZK8 747 aa11.75□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 18.5 ms