RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 Ttll7A4Q9F0 912 aa15.37■□□□□ 0.05
Rnf4-201ENSMUST00000030992 Ipo4Q8VI75 1082 aa15.36■□□□□ 0.05
Rnf4-201ENSMUST00000030992 TefQ9JLC6 301 aa15.36■□□□□ 0.05
Rnf4-201ENSMUST00000030992 Col22a1E9Q7P1 1613 aa15.36■□□□□ 0.05
Rnf4-201ENSMUST00000030992 Prkab2Q6PAM0 271 aa15.36■□□□□ 0.05
Rnf4-201ENSMUST00000030992 Sf3a1Q8K4Z5 791 aaKnown RBP15.36■□□□□ 0.05
Rnf4-201ENSMUST00000030992 Top1mtQ8R4U6 593 aa15.36■□□□□ 0.05
Rnf4-201ENSMUST00000030992 Chmp4cQ9D7F7 232 aa15.36■□□□□ 0.05
Rnf4-201ENSMUST00000030992 Kcnb2A6H8H5 907 aa15.35■□□□□ 0.05
Rnf4-201ENSMUST00000030992 Pde3bQ61409 1100 aa15.35■□□□□ 0.05
Rnf4-201ENSMUST00000030992 Edc3Q8K2D3 508 aaKnown RBP15.35■□□□□ 0.05
Rnf4-201ENSMUST00000030992 MypnQ5DTJ9 1315 aa15.35■□□□□ 0.05
Rnf4-201ENSMUST00000030992 SlkO54988 1233 aa15.35■□□□□ 0.05
Rnf4-201ENSMUST00000030992 Gjb2Q00977 226 aa15.35■□□□□ 0.05
Rnf4-201ENSMUST00000030992 RgmbQ7TQ33 436 aa15.35■□□□□ 0.05
Rnf4-201ENSMUST00000030992 Amigo3Q8C2S7 508 aa15.35■□□□□ 0.05
Rnf4-201ENSMUST00000030992 Rufy3Q9D394 469 aa15.35■□□□□ 0.05
Rnf4-201ENSMUST00000030992 PigbQ9JJQ0 542 aa15.35■□□□□ 0.05
Rnf4-201ENSMUST00000030992 Ets1P27577 440 aa15.34■□□□□ 0.05
Rnf4-201ENSMUST00000030992 Ifit2Q64112 472 aa15.34■□□□□ 0.05
Rnf4-201ENSMUST00000030992 DccP70211 1447 aa15.34■□□□□ 0.05
Rnf4-201ENSMUST00000030992 4931400O07RikQ9D4M5 137 aa15.34■□□□□ 0.05
Rnf4-201ENSMUST00000030992 Fam50bQ9WTJ8 334 aa15.34■□□□□ 0.05
Rnf4-201ENSMUST00000030992 Gadd45bP22339 160 aa15.34■□□□□ 0.05
Rnf4-201ENSMUST00000030992 Cnnm1Q0GA42 951 aa15.34■□□□□ 0.05
Rnf4-201ENSMUST00000030992 Ripor2Q80U16 1078 aa15.34■□□□□ 0.05
Rnf4-201ENSMUST00000030992 4930572O03RikQ8C5Y0 211 aa15.34■□□□□ 0.05
Rnf4-201ENSMUST00000030992 Nphp3Q7TNH6 1325 aa15.33■□□□□ 0.05
Rnf4-201ENSMUST00000030992 PogkQ80TC5 607 aa15.33■□□□□ 0.04
Rnf4-201ENSMUST00000030992 Ubxn10Q8BG34 277 aa15.33■□□□□ 0.04
Rnf4-201ENSMUST00000030992 Rapgef3Q8VCC8 918 aa15.33■□□□□ 0.04
Rnf4-201ENSMUST00000030992 SnrkQ8VDU5 748 aa15.33■□□□□ 0.04
Rnf4-201ENSMUST00000030992 InsrrQ9WTL4 1300 aa15.33■□□□□ 0.04
Rnf4-201ENSMUST00000030992 Hspa2P17156 633 aa15.32■□□□□ 0.04
Rnf4-201ENSMUST00000030992 Zbtb45Q52KG4 520 aa15.32■□□□□ 0.04
Rnf4-201ENSMUST00000030992 Scn4aQ9ER60 1841 aa15.32■□□□□ 0.04
Rnf4-201ENSMUST00000030992 Tbc1d4Q8BYJ6 1307 aa15.32■□□□□ 0.04
Rnf4-201ENSMUST00000030992 1700006A11RikB9EHI3 544 aa15.32■□□□□ 0.04
Rnf4-201ENSMUST00000030992 Sgsm2Q80U12 1005 aa15.31■□□□□ 0.04
Rnf4-201ENSMUST00000030992 Tti2Q8BGV4 512 aa15.31■□□□□ 0.04
Rnf4-201ENSMUST00000030992 Glipr1l2Q9CQ35 332 aa15.31■□□□□ 0.04
Rnf4-201ENSMUST00000030992 Tiam2Q6ZPF3 1715 aa15.31■□□□□ 0.04
Rnf4-201ENSMUST00000030992 Cpa2Q504N0 417 aa15.31■□□□□ 0.04
Rnf4-201ENSMUST00000030992 Dmrt2Q8BG36 561 aa15.31■□□□□ 0.04
Rnf4-201ENSMUST00000030992 Eif3bQ8JZQ9 803 aaKnown RBP15.31■□□□□ 0.04
Rnf4-201ENSMUST00000030992 Slc26a8Q8R0C3 999 aa15.31■□□□□ 0.04
Rnf4-201ENSMUST00000030992 Bag3Q9JLV1 577 aaKnown RBP15.31■□□□□ 0.04
Rnf4-201ENSMUST00000030992 Zfp804bA0A0G2JGH6 1343 aa15.31■□□□□ 0.04
Rnf4-201ENSMUST00000030992 Ric1Q69ZJ7 1422 aa15.3■□□□□ 0.04
Rnf4-201ENSMUST00000030992 Ddx11Q6AXC6 880 aa15.3■□□□□ 0.04
Rnf4-201ENSMUST00000030992 Slc39a6Q8C145 765 aa15.3■□□□□ 0.04
Rnf4-201ENSMUST00000030992 Col4a1P02463 1669 aa15.3■□□□□ 0.04
Rnf4-201ENSMUST00000030992 Larp1Q6ZQ58 1072 aaKnown RBP15.3■□□□□ 0.04
Rnf4-201ENSMUST00000030992 4930504O13RikQ8C5Z9 145 aa15.3■□□□□ 0.04
Rnf4-201ENSMUST00000030992 Syt1P46096 421 aa15.3■□□□□ 0.04
Rnf4-201ENSMUST00000030992 Adora1Q60612 326 aa15.3■□□□□ 0.04
Rnf4-201ENSMUST00000030992 Vsig10D3YX43 558 aa15.29■□□□□ 0.04
Rnf4-201ENSMUST00000030992 Pof1bQ8K4L4 587 aa15.29■□□□□ 0.04
Rnf4-201ENSMUST00000030992 Ank1Q02357 1862 aa15.29■□□□□ 0.04
Rnf4-201ENSMUST00000030992 Ankle2Q6P1H6 964 aa15.29■□□□□ 0.04
Rnf4-201ENSMUST00000030992 Trim52Q8CDV4 233 aa15.29■□□□□ 0.04
Rnf4-201ENSMUST00000030992 Ccar2Q8VDP4 922 aaKnown RBP15.29■□□□□ 0.04
Rnf4-201ENSMUST00000030992 Efcab2Q9CQ46 164 aa15.29■□□□□ 0.04
Rnf4-201ENSMUST00000030992 Il1rapl2Q9ERS6 686 aa15.29■□□□□ 0.04
Rnf4-201ENSMUST00000030992 Ak2Q9WTP6 239 aa15.29■□□□□ 0.04
Rnf4-201ENSMUST00000030992 Ltbp4Q8K4G1 1666 aa15.29■□□□□ 0.04
Rnf4-201ENSMUST00000030992 Rbm8a2A0A0N4SUH6 174 aa15.28■□□□□ 0.04
Rnf4-201ENSMUST00000030992 Tmem87bQ8BKU8 555 aa15.28■□□□□ 0.04
Rnf4-201ENSMUST00000030992 Pdcl3Q8BVF2 240 aa15.28■□□□□ 0.04
Rnf4-201ENSMUST00000030992 Cchcr1Q8K2I2 770 aa15.28■□□□□ 0.04
Rnf4-201ENSMUST00000030992 Rbm8aQ9CWZ3 174 aa15.28■□□□□ 0.04
Rnf4-201ENSMUST00000030992 Mybbp1aQ7TPV4 1344 aaKnown RBP15.28■□□□□ 0.04
Rnf4-201ENSMUST00000030992 Mst1rQ62190 1378 aa15.28■□□□□ 0.04
Rnf4-201ENSMUST00000030992 Rhot2Q8JZN7 620 aa15.28■□□□□ 0.04
Rnf4-201ENSMUST00000030992 Cdca7lQ922M5 438 aa15.28■□□□□ 0.04
Rnf4-201ENSMUST00000030992 Plekhd1B2RPU2 505 aa15.27■□□□□ 0.04
Rnf4-201ENSMUST00000030992 GpkowQ56A08 488 aa15.27■□□□□ 0.04
Rnf4-201ENSMUST00000030992 NmiO35309 314 aa15.27■□□□□ 0.03
Rnf4-201ENSMUST00000030992 Ddx58Q6Q899 926 aa15.27■□□□□ 0.03
Rnf4-201ENSMUST00000030992 Sp8Q8BMJ8 486 aa15.27■□□□□ 0.03
Rnf4-201ENSMUST00000030992 Syce3B5KM66 88 aa15.26■□□□□ 0.03
Rnf4-201ENSMUST00000030992 Slc5a1Q8C3K6 665 aa15.26■□□□□ 0.03
Rnf4-201ENSMUST00000030992 RubcnlQ3TD16 648 aa15.26■□□□□ 0.03
Rnf4-201ENSMUST00000030992 Wdr93Q402B2 695 aa15.26■□□□□ 0.03
Rnf4-201ENSMUST00000030992 DbnlQ62418 436 aa15.26■□□□□ 0.03
Rnf4-201ENSMUST00000030992 Q9D9S1 216 aa15.26■□□□□ 0.03
Rnf4-201ENSMUST00000030992 Kcnn1Q9EQR3 537 aa15.26■□□□□ 0.03
Rnf4-201ENSMUST00000030992 AtrnQ9WU60 1428 aa15.26■□□□□ 0.03
Rnf4-201ENSMUST00000030992 Kif4P33174 1231 aa15.26■□□□□ 0.03
Rnf4-201ENSMUST00000030992 Zbtb40Q6PCS8 1258 aa15.26■□□□□ 0.03
Rnf4-201ENSMUST00000030992 Flad1Q8R123 492 aa15.26■□□□□ 0.03
Rnf4-201ENSMUST00000030992 Stx6Q9JKK1 255 aa15.26■□□□□ 0.03
Rnf4-201ENSMUST00000030992 Mrc1Q61830 1456 aa15.25■□□□□ 0.03
Rnf4-201ENSMUST00000030992 Shank3Q4ACU6 1730 aa15.25■□□□□ 0.03
Rnf4-201ENSMUST00000030992 Erbb4Q61527 1308 aa15.25■□□□□ 0.03
Rnf4-201ENSMUST00000030992 Gm21663A0A0G2JE01 267 aa15.25■□□□□ 0.03
Rnf4-201ENSMUST00000030992 Gm7361D3Z6R1 267 aa15.25■□□□□ 0.03
Rnf4-201ENSMUST00000030992 5031410I06RikE9Q4E0 267 aa15.25■□□□□ 0.03
Rnf4-201ENSMUST00000030992 Gm1979E9QAN3 267 aa15.25■□□□□ 0.03
Rnf4-201ENSMUST00000030992 Gm5862K7N5V5 267 aa15.25■□□□□ 0.03
Retrieved 100 of 22,080 RNA–protein pairs in 30.3 ms