RNA–Protein interactions for RNA: ENSMUST00000020827.6

Rnft1-201, Transcript of E3 ubiquitin-protein ligase RNFT1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnft1, Length 4,452 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnft1-201ENSMUST00000020827 Ltv1Q6NSQ7 470 aaKnown RBP12.13□□□□□ -0.47
Rnft1-201ENSMUST00000020827 Lmbrd2Q8C561 694 aa12.13□□□□□ -0.47
Rnft1-201ENSMUST00000020827 Ctdnep1Q3TP92 244 aa12.13□□□□□ -0.47
Rnft1-201ENSMUST00000020827 DbnlQ62418 436 aa12.13□□□□□ -0.47
Rnft1-201ENSMUST00000020827 Cyp2d34L7N463 504 aa12.13□□□□□ -0.47
Rnft1-201ENSMUST00000020827 Casq1O09165 405 aa12.13□□□□□ -0.47
Rnft1-201ENSMUST00000020827 Erbb4Q61527 1308 aa12.13□□□□□ -0.47
Rnft1-201ENSMUST00000020827 Stk36Q69ZM6 1316 aa12.13□□□□□ -0.47
Rnft1-201ENSMUST00000020827 Lnx1O70263 728 aa12.13□□□□□ -0.47
Rnft1-201ENSMUST00000020827 FosbP13346 338 aa12.13□□□□□ -0.47
Rnft1-201ENSMUST00000020827 Alpk3Q924C5 1678 aa12.13□□□□□ -0.47
Rnft1-201ENSMUST00000020827 Fmnl2A2APV2 1086 aa12.12□□□□□ -0.47
Rnft1-201ENSMUST00000020827 Ccdc129Q14B48 1034 aa12.12□□□□□ -0.47
Rnft1-201ENSMUST00000020827 Rsph3aQ3UFY4 516 aa12.12□□□□□ -0.47
Rnft1-201ENSMUST00000020827 Ltb4r2Q9JJL9 360 aa12.12□□□□□ -0.47
Rnft1-201ENSMUST00000020827 Cd22P35329 862 aa12.12□□□□□ -0.47
Rnft1-201ENSMUST00000020827 NexnQ7TPW1 607 aa12.12□□□□□ -0.47
Rnft1-201ENSMUST00000020827 Slc26a8Q8R0C3 999 aa12.12□□□□□ -0.47
Rnft1-201ENSMUST00000020827 Cap2Q9CYT6 476 aa12.12□□□□□ -0.47
Rnft1-201ENSMUST00000020827 BcorQ8CGN4 1759 aa12.12□□□□□ -0.47
Rnft1-201ENSMUST00000020827 Nlrp9bQ66X22 1003 aa12.12□□□□□ -0.47
Rnft1-201ENSMUST00000020827 Echdc1Q9D9V3 322 aa12.12□□□□□ -0.47
Rnft1-201ENSMUST00000020827 Neurod6P48986 337 aa12.11□□□□□ -0.47
Rnft1-201ENSMUST00000020827 Irf9Q61179 399 aa12.11□□□□□ -0.47
Rnft1-201ENSMUST00000020827 Kiaa0232Q80U59 1396 aaKnown RBP12.11□□□□□ -0.47
Rnft1-201ENSMUST00000020827 Zkscan2G3X952 960 aa12.11□□□□□ -0.47
Rnft1-201ENSMUST00000020827 Ddx46Q569Z5 1032 aaKnown RBP12.11□□□□□ -0.47
Rnft1-201ENSMUST00000020827 HnrnpuQ8VEK3 800 aaKnown RBP12.11□□□□□ -0.47
Rnft1-201ENSMUST00000020827 Abca15E9PWH4 1668 aa12.11□□□□□ -0.47
Rnft1-201ENSMUST00000020827 Col18a1P39061 1774 aa12.11□□□□□ -0.47
Rnft1-201ENSMUST00000020827 Ifit1Q64282 463 aa12.11□□□□□ -0.47
Rnft1-201ENSMUST00000020827 Grm8P47743 908 aa12.11□□□□□ -0.47
Rnft1-201ENSMUST00000020827 Slc51aQ8R000 340 aa12.11□□□□□ -0.47
Rnft1-201ENSMUST00000020827 Tnrc6cQ3UHC0 1690 aaKnown RBP12.11□□□□□ -0.47
Rnft1-201ENSMUST00000020827 GpkowQ56A08 488 aa12.1□□□□□ -0.47
Rnft1-201ENSMUST00000020827 Amer1Q7TS75 1132 aa12.1□□□□□ -0.47
Rnft1-201ENSMUST00000020827 Speer4bQ9D9F7 267 aa12.1□□□□□ -0.47
Rnft1-201ENSMUST00000020827 Ltbp4Q8K4G1 1666 aa12.1□□□□□ -0.47
Rnft1-201ENSMUST00000020827 Kansl3A2RSY1 903 aaKnown RBP12.1□□□□□ -0.47
Rnft1-201ENSMUST00000020827 Add2Q9QYB8 725 aa12.1□□□□□ -0.47
Rnft1-201ENSMUST00000020827 Tnks1bp1P58871 1720 aa12.1□□□□□ -0.47
Rnft1-201ENSMUST00000020827 Zfp777B9EKF4 885 aa12.1□□□□□ -0.47
Rnft1-201ENSMUST00000020827 Iqsec3Q3TES0 1195 aa12.1□□□□□ -0.47
Rnft1-201ENSMUST00000020827 Popdc2Q9ES82 367 aa12.1□□□□□ -0.47
Rnft1-201ENSMUST00000020827 Elp1Q7TT37 1333 aaKnown RBP12.1□□□□□ -0.47
Rnft1-201ENSMUST00000020827 Gjb2Q00977 226 aa12.09□□□□□ -0.47
Rnft1-201ENSMUST00000020827 Fam170aQ66LM6 333 aa12.09□□□□□ -0.47
Rnft1-201ENSMUST00000020827 Ripor2Q80U16 1078 aa12.09□□□□□ -0.47
Rnft1-201ENSMUST00000020827 Abcc4E9Q236 1325 aa12.09□□□□□ -0.47
Rnft1-201ENSMUST00000020827 1700010I14RikQ7TPG0 532 aa12.09□□□□□ -0.47
Rnft1-201ENSMUST00000020827 Tns2Q8CGB6 1400 aa12.09□□□□□ -0.47
Rnft1-201ENSMUST00000020827 AampJ3QN89 436 aa12.08□□□□□ -0.48
Rnft1-201ENSMUST00000020827 Trim56Q80VI1 734 aaKnown RBP12.08□□□□□ -0.48
Rnft1-201ENSMUST00000020827 Ptcd1Q8C2E4 695 aaKnown RBP12.08□□□□□ -0.48
Rnft1-201ENSMUST00000020827 Gm45015A0A140LII9 184 aa12.08□□□□□ -0.48
Rnft1-201ENSMUST00000020827 Gm18336A0A140LIU8 765 aa12.08□□□□□ -0.48
Rnft1-201ENSMUST00000020827 Ifit2Q64112 472 aa12.08□□□□□ -0.48
Rnft1-201ENSMUST00000020827 Ncoa5Q91W39 579 aaKnown RBP12.08□□□□□ -0.48
Rnft1-201ENSMUST00000020827 Tceal9Q9DD24 104 aa12.08□□□□□ -0.48
Rnft1-201ENSMUST00000020827 Akap11E9Q777 1895 aa12.08□□□□□ -0.48
Rnft1-201ENSMUST00000020827 Usp48Q3V0C5 1052 aa12.07□□□□□ -0.48
Rnft1-201ENSMUST00000020827 Efcab2Q9CQ46 164 aa12.07□□□□□ -0.48
Rnft1-201ENSMUST00000020827 Soga3Q6NZL0 945 aa12.07□□□□□ -0.48
Rnft1-201ENSMUST00000020827 Rad50P70388 1312 aa12.07□□□□□ -0.48
Rnft1-201ENSMUST00000020827 Gm21663A0A0G2JE01 267 aa12.07□□□□□ -0.48
Rnft1-201ENSMUST00000020827 Gm7361D3Z6R1 267 aa12.07□□□□□ -0.48
Rnft1-201ENSMUST00000020827 5031410I06RikE9Q4E0 267 aa12.07□□□□□ -0.48
Rnft1-201ENSMUST00000020827 Gm1979E9QAN3 267 aa12.07□□□□□ -0.48
Rnft1-201ENSMUST00000020827 Gm5862K7N5V5 267 aa12.07□□□□□ -0.48
Rnft1-201ENSMUST00000020827 Gm10220K7N660 267 aa12.07□□□□□ -0.48
Rnft1-201ENSMUST00000020827 Cgnl1Q6AW69 1298 aa12.07□□□□□ -0.48
Rnft1-201ENSMUST00000020827 Zkscan1Q8BGS3 561 aaKnown RBP12.07□□□□□ -0.48
Rnft1-201ENSMUST00000020827 Ddx60E9PZQ1 1711 aa12.07□□□□□ -0.48
Rnft1-201ENSMUST00000020827 Kcnb2A6H8H5 907 aa12.07□□□□□ -0.48
Rnft1-201ENSMUST00000020827 Gsdma3Q5Y4Y6 464 aa12.07□□□□□ -0.48
Rnft1-201ENSMUST00000020827 Tti2Q8BGV4 512 aa12.07□□□□□ -0.48
Rnft1-201ENSMUST00000020827 Polr3dQ91WD1 398 aa12.07□□□□□ -0.48
Rnft1-201ENSMUST00000020827 Kdm6aO70546 1401 aa12.07□□□□□ -0.48
Rnft1-201ENSMUST00000020827 Mcm3P25206 812 aaKnown RBP12.06□□□□□ -0.48
Rnft1-201ENSMUST00000020827 BcanQ61361 883 aa12.06□□□□□ -0.48
Rnft1-201ENSMUST00000020827 Ipo4Q8VI75 1082 aa12.06□□□□□ -0.48
Rnft1-201ENSMUST00000020827 Kcnh5Q920E3 988 aa12.06□□□□□ -0.48
Rnft1-201ENSMUST00000020827 Nrxn3Q6P9K9 1571 aa12.06□□□□□ -0.48
Rnft1-201ENSMUST00000020827 Mrps27Q8BK72 415 aaKnown RBP12.05□□□□□ -0.48
Rnft1-201ENSMUST00000020827 Taf7Q9R1C0 341 aa12.05□□□□□ -0.48
Rnft1-201ENSMUST00000020827 Ccne2Q9Z238 404 aa12.05□□□□□ -0.48
Rnft1-201ENSMUST00000020827 Bcl9Q9D219 1425 aa12.05□□□□□ -0.48
Rnft1-201ENSMUST00000020827 Rbm8a2A0A0N4SUH6 174 aa12.05□□□□□ -0.48
Rnft1-201ENSMUST00000020827 Utp18Q5SSI6 552 aaKnown RBP12.05□□□□□ -0.48
Rnft1-201ENSMUST00000020827 Rbm8aQ9CWZ3 174 aa12.05□□□□□ -0.48
Rnft1-201ENSMUST00000020827 Dhx16G3X8X0 1044 aaKnown RBP12.05□□□□□ -0.48
Rnft1-201ENSMUST00000020827 Gm21680A0A0G2JGR8 267 aa12.05□□□□□ -0.48
Rnft1-201ENSMUST00000020827 Slurp2P0DP59 97 aa12.05□□□□□ -0.48
Rnft1-201ENSMUST00000020827 Chd1lQ9CXF7 900 aa12.05□□□□□ -0.48
Rnft1-201ENSMUST00000020827 Rrs1Q9CYH6 365 aaKnown RBP12.05□□□□□ -0.48
Rnft1-201ENSMUST00000020827 Ak2Q9WTP6 239 aa12.05□□□□□ -0.48
Rnft1-201ENSMUST00000020827 Zscan25B2RX31 543 aa12.04□□□□□ -0.48
Rnft1-201ENSMUST00000020827 Atg9aQ68FE2 551 aa12.04□□□□□ -0.48
Rnft1-201ENSMUST00000020827 Rapgef3Q8VCC8 918 aa12.04□□□□□ -0.48
Rnft1-201ENSMUST00000020827 LlphQ9D945 130 aaKnown RBP12.04□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 23 ms