RNA–Protein interactions for RNA: ENSMUST00000001818.4

Crnkl1-201, Transcript of Crooked neck-like protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Crnkl1, Length 3,428 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1-201ENSMUST00000001818 Tbc1d9Q3UYK3 1264 aa9.21□□□□□ -0.93
Crnkl1-201ENSMUST00000001818 Ddx58Q6Q899 926 aa9.21□□□□□ -0.93
Crnkl1-201ENSMUST00000001818 Gigyf1Q99MR1 1044 aaKnown RBP9.21□□□□□ -0.93
Crnkl1-201ENSMUST00000001818 Arfgef2A2A5R2 1792 aa9.21□□□□□ -0.93
Crnkl1-201ENSMUST00000001818 Gm13023A2A8N2 498 aa9.21□□□□□ -0.94
Crnkl1-201ENSMUST00000001818 Brd1E9PZ26 1189 aaKnown RBP9.21□□□□□ -0.94
Crnkl1-201ENSMUST00000001818 4930523C07RikE9Q2T4 99 aa9.21□□□□□ -0.94
Crnkl1-201ENSMUST00000001818 Dctn1O08788 1281 aa9.21□□□□□ -0.94
Crnkl1-201ENSMUST00000001818 GpkowQ56A08 488 aa9.21□□□□□ -0.94
Crnkl1-201ENSMUST00000001818 Esco1Q69Z69 843 aa9.21□□□□□ -0.94
Crnkl1-201ENSMUST00000001818 Msl1Q6PDM1 616 aa9.21□□□□□ -0.94
Crnkl1-201ENSMUST00000001818 Smc4Q8CG47 1286 aa9.21□□□□□ -0.94
Crnkl1-201ENSMUST00000001818 Kiaa0319lQ8K135 1048 aa9.21□□□□□ -0.94
Crnkl1-201ENSMUST00000001818 Pde4bB1AWC9 736 aa9.21□□□□□ -0.94
Crnkl1-201ENSMUST00000001818 Grm8P47743 908 aa9.21□□□□□ -0.94
Crnkl1-201ENSMUST00000001818 Afg3l2Q8JZQ2 802 aaKnown RBP9.21□□□□□ -0.94
Crnkl1-201ENSMUST00000001818 Edc3Q8K2D3 508 aaKnown RBP9.21□□□□□ -0.94
Crnkl1-201ENSMUST00000001818 Mylk2Q8VCR8 613 aa9.21□□□□□ -0.94
Crnkl1-201ENSMUST00000001818 RtcbQ99LF4 505 aaKnown RBP9.21□□□□□ -0.94
Crnkl1-201ENSMUST00000001818 Hsp90aa1P07901 733 aaKnown RBP9.2□□□□□ -0.94
Crnkl1-201ENSMUST00000001818 Bend3Q6PAL0 825 aa9.2□□□□□ -0.94
Crnkl1-201ENSMUST00000001818 Tshz3Q8CGV9 1081 aa9.2□□□□□ -0.94
Crnkl1-201ENSMUST00000001818 Prr5lA2AVJ5 370 aa9.2□□□□□ -0.94
Crnkl1-201ENSMUST00000001818 Wdr63B2RY71 923 aa9.2□□□□□ -0.94
Crnkl1-201ENSMUST00000001818 Lrrc43Q3V0L5 667 aa9.2□□□□□ -0.94
Crnkl1-201ENSMUST00000001818 Cwc25Q9DBF7 416 aa9.2□□□□□ -0.94
Crnkl1-201ENSMUST00000001818 Neurod6P48986 337 aa9.19□□□□□ -0.94
Crnkl1-201ENSMUST00000001818 Zbtb40Q6PCS8 1258 aa9.19□□□□□ -0.94
Crnkl1-201ENSMUST00000001818 Rbm5Q91YE7 815 aaKnown RBP9.19□□□□□ -0.94
Crnkl1-201ENSMUST00000001818 Cyp46a1Q9WVK8 500 aa9.19□□□□□ -0.94
Crnkl1-201ENSMUST00000001818 Ccdc85cE9Q6B2 420 aa9.19□□□□□ -0.94
Crnkl1-201ENSMUST00000001818 NexnQ7TPW1 607 aa9.19□□□□□ -0.94
Crnkl1-201ENSMUST00000001818 Ppm1fQ8CGA0 452 aa9.19□□□□□ -0.94
Crnkl1-201ENSMUST00000001818 Nphp1Q9QY53 687 aa9.19□□□□□ -0.94
Crnkl1-201ENSMUST00000001818 Cers3Q1A3B0 383 aa9.19□□□□□ -0.94
Crnkl1-201ENSMUST00000001818 VeztQ3ZK22 780 aa9.19□□□□□ -0.94
Crnkl1-201ENSMUST00000001818 Trip6Q9Z1Y4 480 aa9.18□□□□□ -0.94
Crnkl1-201ENSMUST00000001818 Pnpla7A2AJ88 1352 aa9.18□□□□□ -0.94
Crnkl1-201ENSMUST00000001818 Phactr2B1AVP0 632 aa9.18□□□□□ -0.94
Crnkl1-201ENSMUST00000001818 Rabep1O35551 862 aa9.18□□□□□ -0.94
Crnkl1-201ENSMUST00000001818 Atp1b3P97370 278 aa9.18□□□□□ -0.94
Crnkl1-201ENSMUST00000001818 Trim52Q8CDV4 233 aa9.18□□□□□ -0.94
Crnkl1-201ENSMUST00000001818 Msh6P54276 1358 aaKnown RBP9.18□□□□□ -0.94
Crnkl1-201ENSMUST00000001818 Phlpp2Q8BXA7 1320 aa9.18□□□□□ -0.94
Crnkl1-201ENSMUST00000001818 Sptbn5F6UCX4 1208 aa9.18□□□□□ -0.94
Crnkl1-201ENSMUST00000001818 Jdp2P97875 163 aa9.18□□□□□ -0.94
Crnkl1-201ENSMUST00000001818 Zc3h12cQ5DTV4 884 aa9.18□□□□□ -0.94
Crnkl1-201ENSMUST00000001818 Srp68Q8BMA6 625 aaKnown RBP9.18□□□□□ -0.94
Crnkl1-201ENSMUST00000001818 Eif3aP23116 1344 aaKnown RBP9.17□□□□□ -0.94
Crnkl1-201ENSMUST00000001818 Atg4a-psA0A0G2JFS9 396 aa9.17□□□□□ -0.94
Crnkl1-201ENSMUST00000001818 Cyp7a1Q64505 503 aa9.17□□□□□ -0.94
Crnkl1-201ENSMUST00000001818 Nol12Q8BG17 217 aa9.17□□□□□ -0.94
Crnkl1-201ENSMUST00000001818 Atg4aQ8C9S8 396 aa9.17□□□□□ -0.94
Crnkl1-201ENSMUST00000001818 Vars2Q3U2A8 1060 aa9.17□□□□□ -0.94
Crnkl1-201ENSMUST00000001818 Morc2aQ69ZX6 1030 aa9.17□□□□□ -0.94
Crnkl1-201ENSMUST00000001818 HmcesQ8R1M0 353 aaKnown RBP9.17□□□□□ -0.94
Crnkl1-201ENSMUST00000001818 Adcy9P51830 1353 aa9.17□□□□□ -0.94
Crnkl1-201ENSMUST00000001818 Ppp1r9bQ6R891 817 aaKnown RBP9.17□□□□□ -0.94
Crnkl1-201ENSMUST00000001818 Snapc4Q8BP86 1333 aa9.16□□□□□ -0.94
Crnkl1-201ENSMUST00000001818 Catsper2A2ARP9 588 aa9.16□□□□□ -0.94
Crnkl1-201ENSMUST00000001818 Ets1P27577 440 aa9.16□□□□□ -0.94
Crnkl1-201ENSMUST00000001818 Gnat3Q3V3I2 354 aa9.16□□□□□ -0.94
Crnkl1-201ENSMUST00000001818 Fam213aQ9CYH2 218 aa9.16□□□□□ -0.94
Crnkl1-201ENSMUST00000001818 MypnQ5DTJ9 1315 aa9.16□□□□□ -0.94
Crnkl1-201ENSMUST00000001818 Erbb4Q61527 1308 aa9.16□□□□□ -0.94
Crnkl1-201ENSMUST00000001818 Shank2Q80Z38 1476 aa9.16□□□□□ -0.94
Crnkl1-201ENSMUST00000001818 EappQ5BU09 281 aa9.16□□□□□ -0.94
Crnkl1-201ENSMUST00000001818 Tgfb1i1Q62219 461 aa9.16□□□□□ -0.94
Crnkl1-201ENSMUST00000001818 Tktl2Q9D4D4 627 aa9.16□□□□□ -0.94
Crnkl1-201ENSMUST00000001818 LratQ9JI60 231 aa9.16□□□□□ -0.94
Crnkl1-201ENSMUST00000001818 Tlr8P58682 1032 aa9.15□□□□□ -0.94
Crnkl1-201ENSMUST00000001818 Atp8b2P98199 1209 aa9.15□□□□□ -0.94
Crnkl1-201ENSMUST00000001818 Aldh1l2Q8K009 923 aa9.15□□□□□ -0.94
Crnkl1-201ENSMUST00000001818 Adgrb1Q3UHD1 1582 aa9.15□□□□□ -0.94
Crnkl1-201ENSMUST00000001818 Stox1B2RQL2 990 aa9.15□□□□□ -0.94
Crnkl1-201ENSMUST00000001818 Cyp2c23E9Q5K4 494 aa9.15□□□□□ -0.94
Crnkl1-201ENSMUST00000001818 CltaO08585 235 aa9.15□□□□□ -0.94
Crnkl1-201ENSMUST00000001818 Cops6O88545 324 aa9.15□□□□□ -0.94
Crnkl1-201ENSMUST00000001818 HellsQ60848 821 aa9.15□□□□□ -0.94
Crnkl1-201ENSMUST00000001818 Ptpdc1Q6NZK8 747 aa9.15□□□□□ -0.94
Crnkl1-201ENSMUST00000001818 Ltb4r2Q9JJL9 360 aa9.15□□□□□ -0.94
Crnkl1-201ENSMUST00000001818 Nhsl1Q8CAF4 1587 aa9.15□□□□□ -0.94
Crnkl1-201ENSMUST00000001818 AampJ3QN89 436 aa9.15□□□□□ -0.95
Crnkl1-201ENSMUST00000001818 Ier5O89113 308 aa9.15□□□□□ -0.95
Crnkl1-201ENSMUST00000001818 Gimap8Q75N62 688 aa9.15□□□□□ -0.95
Crnkl1-201ENSMUST00000001818 Trpm3Q5F4S9 1721 aa9.15□□□□□ -0.95
Crnkl1-201ENSMUST00000001818 Trim34bJ3QNR8 485 aa9.14□□□□□ -0.95
Crnkl1-201ENSMUST00000001818 Tbc1d32Q3URV1 1296 aa9.14□□□□□ -0.95
Crnkl1-201ENSMUST00000001818 Ppm1mQ8BU27 406 aa9.14□□□□□ -0.95
Crnkl1-201ENSMUST00000001818 F2rP30558 430 aa9.14□□□□□ -0.95
Crnkl1-201ENSMUST00000001818 Cetn4Q8K4K1 168 aa9.14□□□□□ -0.95
Crnkl1-201ENSMUST00000001818 Rrs1Q9CYH6 365 aaKnown RBP9.14□□□□□ -0.95
Crnkl1-201ENSMUST00000001818 Dbndd1Q9CZ00 160 aa9.14□□□□□ -0.95
Crnkl1-201ENSMUST00000001818 Fam84aQ9D650 292 aa9.14□□□□□ -0.95
Crnkl1-201ENSMUST00000001818 Adora1Q60612 326 aa9.14□□□□□ -0.95
Crnkl1-201ENSMUST00000001818 Mum1Q6DID5 682 aa9.14□□□□□ -0.95
Crnkl1-201ENSMUST00000001818 Ripor2Q80U16 1078 aa9.14□□□□□ -0.95
Crnkl1-201ENSMUST00000001818 Golgb1E9PVZ8 3238 aa9.14□□□□□ -0.95
Crnkl1-201ENSMUST00000001818 Marf1Q8BJ34 1730 aaKnown RBP9.13□□□□□ -0.95
Crnkl1-201ENSMUST00000001818 MeiocA2AG06 965 aa9.13□□□□□ -0.95
Retrieved 100 of 22,080 RNA–protein pairs in 23.9 ms