RNA–Protein interactions for RNA: ENSMUST00000001147.4

Col6a1-201, Transcript of Collagen alpha-1(VI) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col6a1, Length 4,100 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1-201ENSMUST00000001147 Stard3nlQ9DCI3 235 aa11.17□□□□□ -0.62
Col6a1-201ENSMUST00000001147 Srek1Q8BZX4 494 aaKnown RBP11.17□□□□□ -0.62
Col6a1-201ENSMUST00000001147 Amotl1Q9D4H4 968 aa11.17□□□□□ -0.62
Col6a1-201ENSMUST00000001147 Igbp1bQ9QZ29 343 aa11.17□□□□□ -0.62
Col6a1-201ENSMUST00000001147 Uhrf1bp1B2KF50 1429 aa11.17□□□□□ -0.62
Col6a1-201ENSMUST00000001147 Stk36Q69ZM6 1316 aa11.17□□□□□ -0.62
Col6a1-201ENSMUST00000001147 Hoxa7P02830 229 aa11.16□□□□□ -0.62
Col6a1-201ENSMUST00000001147 Ets1P27577 440 aa11.16□□□□□ -0.62
Col6a1-201ENSMUST00000001147 Zdhhc9P59268 364 aa11.16□□□□□ -0.62
Col6a1-201ENSMUST00000001147 Unc5clQ6R653 518 aa11.16□□□□□ -0.62
Col6a1-201ENSMUST00000001147 Drc7Q6V3W6 876 aa11.16□□□□□ -0.62
Col6a1-201ENSMUST00000001147 Esyt1Q3U7R1 1092 aaKnown RBP11.16□□□□□ -0.62
Col6a1-201ENSMUST00000001147 Cdca7lQ922M5 438 aa11.16□□□□□ -0.62
Col6a1-201ENSMUST00000001147 Bloc1s2Q9CWG9 143 aa11.16□□□□□ -0.62
Col6a1-201ENSMUST00000001147 Me1P06801 572 aa11.16□□□□□ -0.62
Col6a1-201ENSMUST00000001147 Zpr1Q62384 459 aa11.16□□□□□ -0.62
Col6a1-201ENSMUST00000001147 Golim4Q8BXA1 655 aa11.16□□□□□ -0.62
Col6a1-201ENSMUST00000001147 Slc39a6Q8C145 765 aa11.16□□□□□ -0.62
Col6a1-201ENSMUST00000001147 Ccar2Q8VDP4 922 aaKnown RBP11.16□□□□□ -0.62
Col6a1-201ENSMUST00000001147 SrrtQ99MR6 875 aaKnown RBP11.16□□□□□ -0.62
Col6a1-201ENSMUST00000001147 Rad50P70388 1312 aa11.16□□□□□ -0.62
Col6a1-201ENSMUST00000001147 Cplx2P84086 134 aa11.16□□□□□ -0.62
Col6a1-201ENSMUST00000001147 Atf3Q60765 181 aa11.16□□□□□ -0.62
Col6a1-201ENSMUST00000001147 Arhgef1Q61210 920 aaKnown RBP11.16□□□□□ -0.62
Col6a1-201ENSMUST00000001147 Foxp4Q9DBY0 795 aaKnown RBP11.16□□□□□ -0.62
Col6a1-201ENSMUST00000001147 Gm21680A0A0G2JGR8 267 aa11.15□□□□□ -0.62
Col6a1-201ENSMUST00000001147 Tpm3-rs7D3Z2H9 248 aa11.15□□□□□ -0.62
Col6a1-201ENSMUST00000001147 Depdc5P61460 1591 aa11.15□□□□□ -0.62
Col6a1-201ENSMUST00000001147 Mindy4Q3UQI9 744 aa11.15□□□□□ -0.62
Col6a1-201ENSMUST00000001147 Hand2Q61039 217 aa11.15□□□□□ -0.62
Col6a1-201ENSMUST00000001147 Slc35g1Q8BY79 368 aa11.15□□□□□ -0.62
Col6a1-201ENSMUST00000001147 LratQ9JI60 231 aa11.15□□□□□ -0.62
Col6a1-201ENSMUST00000001147 Rbbp8nlA2ABX0 614 aa11.15□□□□□ -0.63
Col6a1-201ENSMUST00000001147 GphnQ8BUV3 769 aaKnown RBP11.15□□□□□ -0.63
Col6a1-201ENSMUST00000001147 Prex1Q69ZK0 1650 aa11.15□□□□□ -0.63
Col6a1-201ENSMUST00000001147 Knl1Q66JQ7 1612 aa11.14□□□□□ -0.63
Col6a1-201ENSMUST00000001147 Tgfb1i1Q62219 461 aa11.14□□□□□ -0.63
Col6a1-201ENSMUST00000001147 Ankib1Q6ZPS6 1085 aa11.14□□□□□ -0.63
Col6a1-201ENSMUST00000001147 Rufy3Q9D394 469 aa11.14□□□□□ -0.63
Col6a1-201ENSMUST00000001147 Kcnn1Q9EQR3 537 aa11.14□□□□□ -0.63
Col6a1-201ENSMUST00000001147 Zbtb21E9Q444 1094 aa11.14□□□□□ -0.63
Col6a1-201ENSMUST00000001147 Stat1P42225 749 aa11.14□□□□□ -0.63
Col6a1-201ENSMUST00000001147 FancaQ9JL70 1439 aa11.14□□□□□ -0.63
Col6a1-201ENSMUST00000001147 Atp7bQ64446 1462 aa11.14□□□□□ -0.63
Col6a1-201ENSMUST00000001147 Nphp3Q7TNH6 1325 aa11.14□□□□□ -0.63
Col6a1-201ENSMUST00000001147 Xrn1P97789 1719 aaKnown RBP11.14□□□□□ -0.63
Col6a1-201ENSMUST00000001147 Tmem67Q8BR76 992 aa11.14□□□□□ -0.63
Col6a1-201ENSMUST00000001147 Tubb6Q922F4 447 aa11.14□□□□□ -0.63
Col6a1-201ENSMUST00000001147 Bin1O08539 588 aaKnown RBP11.13□□□□□ -0.63
Col6a1-201ENSMUST00000001147 Eif4a1P60843 406 aaKnown RBP11.13□□□□□ -0.63
Col6a1-201ENSMUST00000001147 Dzip1Q8BMD2 852 aa11.13□□□□□ -0.63
Col6a1-201ENSMUST00000001147 Erc1Q99MI1 1120 aa11.13□□□□□ -0.63
Col6a1-201ENSMUST00000001147 Mrvi1Q9WUX5 899 aaKnown RBP11.13□□□□□ -0.63
Col6a1-201ENSMUST00000001147 CrcpO35427 148 aa11.13□□□□□ -0.63
Col6a1-201ENSMUST00000001147 Dnajc2P54103 621 aaKnown RBP11.13□□□□□ -0.63
Col6a1-201ENSMUST00000001147 Gabpb2P81069 414 aa11.13□□□□□ -0.63
Col6a1-201ENSMUST00000001147 Wdr93Q402B2 695 aa11.13□□□□□ -0.63
Col6a1-201ENSMUST00000001147 Plekhg1F6S200 1446 aa11.13□□□□□ -0.63
Col6a1-201ENSMUST00000001147 Tyro3P55144 880 aa11.13□□□□□ -0.63
Col6a1-201ENSMUST00000001147 Prkab2Q6PAM0 271 aa11.13□□□□□ -0.63
Col6a1-201ENSMUST00000001147 Tbc1d7Q9D0K0 293 aa11.13□□□□□ -0.63
Col6a1-201ENSMUST00000001147 Igflr1Q3U4N7 345 aa11.12□□□□□ -0.63
Col6a1-201ENSMUST00000001147 Gas2l3Q3UWW6 683 aa11.12□□□□□ -0.63
Col6a1-201ENSMUST00000001147 Ano6Q6P9J9 911 aa11.12□□□□□ -0.63
Col6a1-201ENSMUST00000001147 Larp1Q6ZQ58 1072 aaKnown RBP11.12□□□□□ -0.63
Col6a1-201ENSMUST00000001147 Ano1Q8BHY3 960 aa11.12□□□□□ -0.63
Col6a1-201ENSMUST00000001147 4930504O13RikQ8C5Z9 145 aa11.12□□□□□ -0.63
Col6a1-201ENSMUST00000001147 Ccdc158Q8CDI6 1109 aa11.12□□□□□ -0.63
Col6a1-201ENSMUST00000001147 Rufy2Q8R4C2 606 aa11.12□□□□□ -0.63
Col6a1-201ENSMUST00000001147 Ccdc47Q9D024 483 aaKnown RBP11.12□□□□□ -0.63
Col6a1-201ENSMUST00000001147 Atp10aO54827 1508 aa11.12□□□□□ -0.63
Col6a1-201ENSMUST00000001147 Gtf2f1Q3THK3 508 aaKnown RBP11.12□□□□□ -0.63
Col6a1-201ENSMUST00000001147 Limch1Q3UH68 1057 aa11.12□□□□□ -0.63
Col6a1-201ENSMUST00000001147 SympkQ80X82 1284 aa11.12□□□□□ -0.63
Col6a1-201ENSMUST00000001147 Tubgcp6G5E8P0 1769 aa11.12□□□□□ -0.63
Col6a1-201ENSMUST00000001147 Smg7Q5RJH6 1138 aaKnown RBP11.12□□□□□ -0.63
Col6a1-201ENSMUST00000001147 Vps54Q5SPW0 977 aa11.12□□□□□ -0.63
Col6a1-201ENSMUST00000001147 Anp32cQ64G17 123 aa11.12□□□□□ -0.63
Col6a1-201ENSMUST00000001147 Zfp91Q62511 572 aa11.11□□□□□ -0.63
Col6a1-201ENSMUST00000001147 Sass6Q80UK7 654 aa11.11□□□□□ -0.63
Col6a1-201ENSMUST00000001147 AidaQ8C4Q6 305 aa11.11□□□□□ -0.63
Col6a1-201ENSMUST00000001147 Cnksr1A2A9K7 700 aa11.11□□□□□ -0.63
Col6a1-201ENSMUST00000001147 Atf5O70191 283 aa11.11□□□□□ -0.63
Col6a1-201ENSMUST00000001147 Abl1P00520 1123 aa11.11□□□□□ -0.63
Col6a1-201ENSMUST00000001147 Slu7Q8BHJ9 585 aa11.11□□□□□ -0.63
Col6a1-201ENSMUST00000001147 Cyp2d12Q8BVD2 504 aa11.11□□□□□ -0.63
Col6a1-201ENSMUST00000001147 Flad1Q8R123 492 aa11.11□□□□□ -0.63
Col6a1-201ENSMUST00000001147 Taf7Q9R1C0 341 aa11.11□□□□□ -0.63
Col6a1-201ENSMUST00000001147 Myo5cE9Q1F5 1742 aa11.11□□□□□ -0.63
Col6a1-201ENSMUST00000001147 Bach2P97303 839 aa11.11□□□□□ -0.63
Col6a1-201ENSMUST00000001147 Ubash3aQ3V3E1 624 aa11.11□□□□□ -0.63
Col6a1-201ENSMUST00000001147 Elmsan1E9Q2I4 1089 aaKnown RBP11.11□□□□□ -0.63
Col6a1-201ENSMUST00000001147 Bend3Q6PAL0 825 aa11.11□□□□□ -0.63
Col6a1-201ENSMUST00000001147 Zfp51Q3U4L8 781 aa11.1□□□□□ -0.63
Col6a1-201ENSMUST00000001147 Dhx38Q80X98 1228 aa11.1□□□□□ -0.63
Col6a1-201ENSMUST00000001147 Fsd2Q8BZ52 692 aa11.1□□□□□ -0.63
Col6a1-201ENSMUST00000001147 Lmbrd2Q8C561 694 aa11.1□□□□□ -0.63
Col6a1-201ENSMUST00000001147 Srgap1Q91Z69 1062 aa11.1□□□□□ -0.63
Col6a1-201ENSMUST00000001147 Odf2lQ9D478 642 aa11.1□□□□□ -0.63
Col6a1-201ENSMUST00000001147 MaddQ80U28 1577 aa11.1□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 98.2 ms