RNA–Protein interactions for RNA: ENST00000625395.1

SEC23A-215, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 5 BASIC

Gene SEC23A, Length 261 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-215ENST00000625395 SPHK2Q9NRA0 654 aa3.24□□□□□ -1.89
SEC23A-215ENST00000625395 SPHK1Q9NYA1 384 aa3.24□□□□□ -1.89
SEC23A-215ENST00000625395 PSD3Q9NYI0 1048 aa3.24□□□□□ -1.89
SEC23A-215ENST00000625395 CA5BQ9Y2D0 317 aa3.24□□□□□ -1.89
SEC23A-215ENST00000625395 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.24□□□□□ -1.89
SEC23A-215ENST00000625395 MYLKQ15746 1914 aa3.24□□□□□ -1.89
SEC23A-215ENST00000625395 ZNF469Q96JG9 3925 aaPredicted RBP3.24□□□□□ -1.89
SEC23A-215ENST00000625395 ABCA2Q9BZC7 2435 aa3.23□□□□□ -1.89
SEC23A-215ENST00000625395 CEP192Q8TEP8 1941 aa3.23□□□□□ -1.89
SEC23A-215ENST00000625395 ANKHD1Q8IWZ3 2542 aaKnown RBP3.23□□□□□ -1.89
SEC23A-215ENST00000625395 CCDC169A6NNP5 214 aa3.23□□□□□ -1.89
SEC23A-215ENST00000625395 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.23□□□□□ -1.89
SEC23A-215ENST00000625395 NEDD8-MDP1E9PL57 170 aa3.23□□□□□ -1.89
SEC23A-215ENST00000625395 TLR4O00206 839 aa3.23□□□□□ -1.89
SEC23A-215ENST00000625395 SLC16A4O15374 487 aa3.23□□□□□ -1.89
SEC23A-215ENST00000625395 COCHO43405 550 aa3.23□□□□□ -1.89
SEC23A-215ENST00000625395 PRAMEF11O60813 436 aa3.23□□□□□ -1.89
SEC23A-215ENST00000625395 TNFSF15O95150 251 aa3.23□□□□□ -1.89
SEC23A-215ENST00000625395 GPIP06744 558 aa3.23□□□□□ -1.89
SEC23A-215ENST00000625395 MBL2P11226 248 aaPredicted RBP3.23□□□□□ -1.89
SEC23A-215ENST00000625395 BDNFP23560 247 aa3.23□□□□□ -1.89
SEC23A-215ENST00000625395 RBMS1P29558 406 aaKnown RBP3.23□□□□□ -1.89
SEC23A-215ENST00000625395 KRT2P35908 639 aa3.23□□□□□ -1.89
SEC23A-215ENST00000625395 MFAP4P55083 255 aa3.23□□□□□ -1.89
SEC23A-215ENST00000625395 PEX3P56589 373 aa3.23□□□□□ -1.89
SEC23A-215ENST00000625395 SLC8A3P57103 927 aa3.23□□□□□ -1.89
SEC23A-215ENST00000625395 DSCR10P59022 87 aa3.23□□□□□ -1.89
SEC23A-215ENST00000625395 RPS14P62263 151 aaKnown RBP3.23□□□□□ -1.89
SEC23A-215ENST00000625395 TAF10Q12962 218 aa3.23□□□□□ -1.89
SEC23A-215ENST00000625395 IRF3Q14653 427 aa3.23□□□□□ -1.89
SEC23A-215ENST00000625395 RAB41Q5JT25 222 aa3.23□□□□□ -1.89
SEC23A-215ENST00000625395 DHRS7BQ6IAN0 325 aaPredicted RBP3.23□□□□□ -1.89
SEC23A-215ENST00000625395 RSRC2Q7L4I2 434 aaKnown RBP3.23□□□□□ -1.89
SEC23A-215ENST00000625395 TRMT11Q7Z4G4 463 aaKnown RBP3.23□□□□□ -1.89
SEC23A-215ENST00000625395 ZFAND4Q86XD8 727 aa3.23□□□□□ -1.89
SEC23A-215ENST00000625395 ZC3H3Q8IXZ2 948 aaKnown RBP3.23□□□□□ -1.89
SEC23A-215ENST00000625395 THEM5Q8N1Q8 247 aa3.23□□□□□ -1.89
SEC23A-215ENST00000625395 PDCL2Q8N4E4 241 aa3.23□□□□□ -1.89
SEC23A-215ENST00000625395 TTC39CQ8N584 583 aa3.23□□□□□ -1.89
SEC23A-215ENST00000625395 NIPA2Q8N8Q9 360 aa3.23□□□□□ -1.89
SEC23A-215ENST00000625395 C2orf15Q8WU43 125 aaKnown RBP3.23□□□□□ -1.89
SEC23A-215ENST00000625395 PRCCQ92733 491 aaPredicted RBP3.23□□□□□ -1.89
SEC23A-215ENST00000625395 PIWIL1Q96J94 861 aaKnown RBP3.23□□□□□ -1.89
SEC23A-215ENST00000625395 TREX2Q9BQ50 279 aaPredicted RBP3.23□□□□□ -1.89
SEC23A-215ENST00000625395 LMF2Q9BU23 707 aaKnown RBP3.23□□□□□ -1.89
SEC23A-215ENST00000625395 TRAF4Q9BUZ4 470 aaPredicted RBP3.23□□□□□ -1.89
SEC23A-215ENST00000625395 NEUROG2Q9H2A3 272 aa3.23□□□□□ -1.89
SEC23A-215ENST00000625395 OSGEPL1Q9H4B0 414 aa3.23□□□□□ -1.89
SEC23A-215ENST00000625395 SYNCQ9H7C4 482 aa3.23□□□□□ -1.89
SEC23A-215ENST00000625395 FGF21Q9NSA1 209 aa3.23□□□□□ -1.89
SEC23A-215ENST00000625395 DNAJC17Q9NVM6 304 aaKnown RBP3.23□□□□□ -1.89
SEC23A-215ENST00000625395 RHCGQ9UBD6 479 aa3.23□□□□□ -1.89
SEC23A-215ENST00000625395 NAP1L2Q9ULW6 460 aaPredicted RBP3.23□□□□□ -1.89
SEC23A-215ENST00000625395 UBQLN1Q9UMX0 589 aaKnown RBP3.23□□□□□ -1.89
SEC23A-215ENST00000625395 ZNF148Q9UQR1 794 aa3.23□□□□□ -1.89
SEC23A-215ENST00000625395 MYO16Q9Y6X6 1858 aa3.23□□□□□ -1.89
SEC23A-215ENST00000625395 TRIP11Q15643 1979 aa3.23□□□□□ -1.89
SEC23A-215ENST00000625395 CCDC168Q8NDH2 2452 aa3.22□□□□□ -1.89
SEC23A-215ENST00000625395 ZFC3H1O60293 1989 aaKnown RBP3.22□□□□□ -1.89
SEC23A-215ENST00000625395 FAM47DPA6NHR8 397 aa3.22□□□□□ -1.89
SEC23A-215ENST00000625395 KPNA7A9QM74 516 aa3.22□□□□□ -1.89
SEC23A-215ENST00000625395 ANKRD63C9JTQ0 380 aa3.22□□□□□ -1.89
SEC23A-215ENST00000625395 CCER2I3L3R5 266 aa3.22□□□□□ -1.89
SEC23A-215ENST00000625395 SLC9A3R1O14745 358 aaPredicted RBP3.22□□□□□ -1.89
SEC23A-215ENST00000625395 CACNG3O60359 315 aa3.22□□□□□ -1.89
SEC23A-215ENST00000625395 DFNA5O60443 496 aa3.22□□□□□ -1.89
SEC23A-215ENST00000625395 RTN2O75298 545 aa3.22□□□□□ -1.89
SEC23A-215ENST00000625395 SEMA4FO95754 770 aa3.22□□□□□ -1.89
SEC23A-215ENST00000625395 WDPCPO95876 746 aa3.22□□□□□ -1.89
SEC23A-215ENST00000625395 CLTAP09496 248 aa3.22□□□□□ -1.89
SEC23A-215ENST00000625395 SFTPCP11686 197 aa3.22□□□□□ -1.89
SEC23A-215ENST00000625395 ODC1P11926 461 aa3.22□□□□□ -1.89
SEC23A-215ENST00000625395 IFNAR1P17181 557 aa3.22□□□□□ -1.89
SEC23A-215ENST00000625395 PDX1P52945 283 aa3.22□□□□□ -1.89
SEC23A-215ENST00000625395 MFAP3P55082 362 aa3.22□□□□□ -1.89
SEC23A-215ENST00000625395 C21orf59P57076 290 aa3.22□□□□□ -1.89
SEC23A-215ENST00000625395 SMARCB1Q12824 385 aa3.22□□□□□ -1.89
SEC23A-215ENST00000625395 UGP2Q16851 508 aa3.22□□□□□ -1.89
SEC23A-215ENST00000625395 ZNF542PQ5EBM4 170 aa3.22□□□□□ -1.89
SEC23A-215ENST00000625395 FHL5Q5TD97 284 aa3.22□□□□□ -1.89
SEC23A-215ENST00000625395 SPINK14Q6IE38 97 aa3.22□□□□□ -1.89
SEC23A-215ENST00000625395 KRTAP5-1Q6L8H4 278 aa3.22□□□□□ -1.89
SEC23A-215ENST00000625395 SLC39A4Q6P5W5 647 aa3.22□□□□□ -1.89
SEC23A-215ENST00000625395 FIP1L1Q6UN15 594 aaKnown RBP3.22□□□□□ -1.89
SEC23A-215ENST00000625395 TMCO3Q6UWJ1 677 aa3.22□□□□□ -1.89
SEC23A-215ENST00000625395 LDB1Q86U70 411 aaPredicted RBP3.22□□□□□ -1.89
SEC23A-215ENST00000625395 NUDT13Q86X67 352 aa3.22□□□□□ -1.89
SEC23A-215ENST00000625395 RAB42Q8N4Z0 105 aa3.22□□□□□ -1.89
SEC23A-215ENST00000625395 SYT2Q8N9I0 419 aaPredicted RBP3.22□□□□□ -1.89
SEC23A-215ENST00000625395 SSC4DQ8WTU2 575 aa3.22□□□□□ -1.89
SEC23A-215ENST00000625395 SAT2Q96F10 170 aaPredicted RBP3.22□□□□□ -1.89
SEC23A-215ENST00000625395 SPATA17Q96L03 361 aa3.22□□□□□ -1.89
SEC23A-215ENST00000625395 NSMCE3Q96MG7 304 aa3.22□□□□□ -1.89
SEC23A-215ENST00000625395 KCNK16Q96T55 309 aa3.22□□□□□ -1.89
SEC23A-215ENST00000625395 ACBD6Q9BR61 282 aa3.22□□□□□ -1.89
SEC23A-215ENST00000625395 BBS2Q9BXC9 721 aa3.22□□□□□ -1.89
SEC23A-215ENST00000625395 CLEC7AQ9BXN2 247 aa3.22□□□□□ -1.89
SEC23A-215ENST00000625395 MMP27Q9H306 513 aa3.22□□□□□ -1.89
SEC23A-215ENST00000625395 RPF1Q9H9Y2 349 aaKnown RBP3.22□□□□□ -1.89
SEC23A-215ENST00000625395 PRSS16Q9NQE7 514 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms