RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 CKAP4Q07065 602 aaKnown RBP3.44□□□□□ -1.86
CHD9-212ENST00000564641 XRCC4Q13426 336 aa3.44□□□□□ -1.86
CHD9-212ENST00000564641 SQLEQ14534 574 aa3.44□□□□□ -1.86
CHD9-212ENST00000564641 PPP1R7Q15435 360 aa3.44□□□□□ -1.86
CHD9-212ENST00000564641 LETM2Q2VYF4 491 aa3.44□□□□□ -1.86
CHD9-212ENST00000564641 C15orf32Q32M92 178 aa3.44□□□□□ -1.86
CHD9-212ENST00000564641 LRIT3Q3SXY7 679 aa3.44□□□□□ -1.86
CHD9-212ENST00000564641 KBTBD12Q3ZCT8 623 aa3.44□□□□□ -1.86
CHD9-212ENST00000564641 SLC25A53Q5H9E4 307 aa3.44□□□□□ -1.86
CHD9-212ENST00000564641 SLC35D3Q5M8T2 416 aa3.44□□□□□ -1.86
CHD9-212ENST00000564641 MPP7Q5T2T1 576 aa3.44□□□□□ -1.86
CHD9-212ENST00000564641 ATL3Q6DD88 541 aa3.44□□□□□ -1.86
CHD9-212ENST00000564641 FAM173BQ6P4H8 233 aa3.44□□□□□ -1.86
CHD9-212ENST00000564641 C6orf89Q6UWU4 347 aa3.44□□□□□ -1.86
CHD9-212ENST00000564641 CCDC80Q76M96 950 aa3.44□□□□□ -1.86
CHD9-212ENST00000564641 ADCK2Q7Z695 626 aa3.44□□□□□ -1.86
CHD9-212ENST00000564641 CENPVQ7Z7K6 275 aaPredicted RBP3.44□□□□□ -1.86
CHD9-212ENST00000564641 LCA5Q86VQ0 697 aa3.44□□□□□ -1.86
CHD9-212ENST00000564641 ZNF584Q8IVC4 421 aa3.44□□□□□ -1.86
CHD9-212ENST00000564641 VSTM4Q8IW00 320 aa3.44□□□□□ -1.86
CHD9-212ENST00000564641 UNC45BQ8IWX7 931 aa3.44□□□□□ -1.86
CHD9-212ENST00000564641 TIGD4Q8IY51 512 aa3.44□□□□□ -1.86
CHD9-212ENST00000564641 TDHQ8IZJ6 230 aa3.44□□□□□ -1.86
CHD9-212ENST00000564641 NUP93Q8N1F7 819 aa3.44□□□□□ -1.86
CHD9-212ENST00000564641 SLC35F6Q8N357 371 aa3.44□□□□□ -1.86
CHD9-212ENST00000564641 METTL4Q8N3J2 472 aa3.44□□□□□ -1.86
CHD9-212ENST00000564641 ARFGAP2Q8N6H7 521 aa3.44□□□□□ -1.86
CHD9-212ENST00000564641 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.44□□□□□ -1.86
CHD9-212ENST00000564641 NECAB1Q8N987 351 aa3.44□□□□□ -1.86
CHD9-212ENST00000564641 CCDC63Q8NA47 563 aa3.44□□□□□ -1.86
CHD9-212ENST00000564641 GRK7Q8WTQ7 553 aa3.44□□□□□ -1.86
CHD9-212ENST00000564641 SPACA9Q96E40 222 aaPredicted RBP3.44□□□□□ -1.86
CHD9-212ENST00000564641 RPGRIP1Q96KN7 1286 aa3.44□□□□□ -1.86
CHD9-212ENST00000564641 ANKRD27Q96NW4 1050 aa3.44□□□□□ -1.86
CHD9-212ENST00000564641 NECTIN4Q96NY8 510 aa3.44□□□□□ -1.86
CHD9-212ENST00000564641 MS4A10Q96PG2 267 aa3.44□□□□□ -1.86
CHD9-212ENST00000564641 CCT8L2Q96SF2 557 aa3.44□□□□□ -1.86
CHD9-212ENST00000564641 PSMB7Q99436 277 aa3.44□□□□□ -1.86
CHD9-212ENST00000564641 MGME1Q9BQP7 344 aa3.44□□□□□ -1.86
CHD9-212ENST00000564641 DESI2Q9BSY9 194 aa3.44□□□□□ -1.86
CHD9-212ENST00000564641 PUS3Q9BZE2 481 aaKnown RBP3.44□□□□□ -1.86
CHD9-212ENST00000564641 THAP2Q9H0W7 228 aa3.44□□□□□ -1.86
CHD9-212ENST00000564641 VCX3BQ9H321 246 aa3.44□□□□□ -1.86
CHD9-212ENST00000564641 COPS7BQ9H9Q2 264 aaPredicted RBP3.44□□□□□ -1.86
CHD9-212ENST00000564641 VCX3AQ9NNX9 186 aa3.44□□□□□ -1.86
CHD9-212ENST00000564641 FAM207AQ9NSI2 230 aaPredicted RBP3.44□□□□□ -1.86
CHD9-212ENST00000564641 ATXN10Q9UBB4 475 aa3.44□□□□□ -1.86
CHD9-212ENST00000564641 STUB1Q9UNE7 303 aa3.44□□□□□ -1.86
CHD9-212ENST00000564641 SNX5Q9Y5X3 404 aa3.44□□□□□ -1.86
CHD9-212ENST00000564641 TDRD15B5MCY1 1934 aaKnown RBP3.44□□□□□ -1.86
CHD9-212ENST00000564641 RANBP2P49792 3224 aaKnown RBP3.44□□□□□ -1.86
CHD9-212ENST00000564641 MROH7Q68CQ1 1323 aa3.44□□□□□ -1.86
CHD9-212ENST00000564641 DOCK3Q8IZD9 2030 aa3.43□□□□□ -1.86
CHD9-212ENST00000564641 PTPRFP10586 1907 aa3.43□□□□□ -1.86
CHD9-212ENST00000564641 A0A1W2PR80 420 aa3.43□□□□□ -1.86
CHD9-212ENST00000564641 HTR3EA5X5Y0 456 aa3.43□□□□□ -1.86
CHD9-212ENST00000564641 GMNCA6NCL1 334 aa3.43□□□□□ -1.86
CHD9-212ENST00000564641 CFAP73A6NFT4 308 aa3.43□□□□□ -1.86
CHD9-212ENST00000564641 ACOD1A6NK06 481 aa3.43□□□□□ -1.86
CHD9-212ENST00000564641 IFIT3O14879 490 aaKnown RBP3.43□□□□□ -1.86
CHD9-212ENST00000564641 TFECO14948 347 aaPredicted RBP3.43□□□□□ -1.86
CHD9-212ENST00000564641 SPRY1O43609 319 aaPredicted RBP3.43□□□□□ -1.86
CHD9-212ENST00000564641 DIAPH2O60879 1101 aa3.43□□□□□ -1.86
CHD9-212ENST00000564641 ZNF189O75820 626 aaPredicted RBP3.43□□□□□ -1.86
CHD9-212ENST00000564641 SLCO2B1O94956 709 aa3.43□□□□□ -1.86
CHD9-212ENST00000564641 PENKP01210 267 aaPredicted RBP3.43□□□□□ -1.86
CHD9-212ENST00000564641 VIMP08670 466 aaKnown RBP3.43□□□□□ -1.86
CHD9-212ENST00000564641 DANCRP0C864 163 aa3.43□□□□□ -1.86
CHD9-212ENST00000564641 THEGLP0DJG4 465 aa3.43□□□□□ -1.86
CHD9-212ENST00000564641 PFKFB1P16118 471 aa3.43□□□□□ -1.86
CHD9-212ENST00000564641 ZNF24P17028 368 aa3.43□□□□□ -1.86
CHD9-212ENST00000564641 ACHEP22303 614 aa3.43□□□□□ -1.86
CHD9-212ENST00000564641 GABRA5P31644 462 aa3.43□□□□□ -1.86
CHD9-212ENST00000564641 PCGF2P35227 344 aa3.43□□□□□ -1.86
CHD9-212ENST00000564641 MATR3P43243 847 aaKnown RBP eCLIP3.43□□□□□ -1.86
CHD9-212ENST00000564641 PSMD7P51665 324 aa3.43□□□□□ -1.86
CHD9-212ENST00000564641 HMGCS2P54868 508 aa3.43□□□□□ -1.86
CHD9-212ENST00000564641 BACE1P56817 501 aa3.43□□□□□ -1.86
CHD9-212ENST00000564641 MECOMQ03112 1051 aa3.43□□□□□ -1.86
CHD9-212ENST00000564641 SPP2Q13103 211 aa3.43□□□□□ -1.86
CHD9-212ENST00000564641 RIPK1Q13546 671 aa3.43□□□□□ -1.86
CHD9-212ENST00000564641 HERC3Q15034 1050 aa3.43□□□□□ -1.86
CHD9-212ENST00000564641 PTGISQ16647 500 aa3.43□□□□□ -1.86
CHD9-212ENST00000564641 MEP1BQ16820 701 aa3.43□□□□□ -1.86
CHD9-212ENST00000564641 PHLDA2Q53GA4 152 aa3.43□□□□□ -1.86
CHD9-212ENST00000564641 ANKRD20A8PQ5CZ79 823 aa3.43□□□□□ -1.86
CHD9-212ENST00000564641 C6orf136Q5SQH8 315 aa3.43□□□□□ -1.86
CHD9-212ENST00000564641 TMEM211Q6ICI0 200 aa3.43□□□□□ -1.86
CHD9-212ENST00000564641 KDM7AQ6ZMT4 941 aa3.43□□□□□ -1.86
CHD9-212ENST00000564641 TMEM173Q86WV6 379 aaPredicted RBP3.43□□□□□ -1.86
CHD9-212ENST00000564641 CCDC65Q8IXS2 484 aa3.43□□□□□ -1.86
CHD9-212ENST00000564641 SYCP3Q8IZU3 236 aa3.43□□□□□ -1.86
CHD9-212ENST00000564641 ARHGAP18Q8N392 663 aa3.43□□□□□ -1.86
CHD9-212ENST00000564641 ARL10Q8N8L6 244 aa3.43□□□□□ -1.86
CHD9-212ENST00000564641 OR11H4Q8NGC9 324 aa3.43□□□□□ -1.86
CHD9-212ENST00000564641 C9orf43Q8TAL5 461 aaPredicted RBP3.43□□□□□ -1.86
CHD9-212ENST00000564641 FIBINQ8TAL6 211 aa3.43□□□□□ -1.86
CHD9-212ENST00000564641 CORO2AQ92828 525 aa3.43□□□□□ -1.86
CHD9-212ENST00000564641 PTP4A1Q93096 173 aa3.43□□□□□ -1.86
CHD9-212ENST00000564641 ZNF486Q96H40 463 aaPredicted RBP3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms