RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 TFEBP19484 476 aa4.63□□□□□ -1.67
SCAF11-214ENST00000550893 TNFRSF1BP20333 461 aa4.63□□□□□ -1.67
SCAF11-214ENST00000550893 NR1D1P20393 614 aa4.63□□□□□ -1.67
SCAF11-214ENST00000550893 PSMB5P28074 263 aa4.63□□□□□ -1.67
SCAF11-214ENST00000550893 PKLRP30613 574 aa4.63□□□□□ -1.67
SCAF11-214ENST00000550893 MAPK9P45984 424 aa4.63□□□□□ -1.67
SCAF11-214ENST00000550893 GSDMDP57764 484 aa4.63□□□□□ -1.67
SCAF11-214ENST00000550893 KRTAP10-9P60411 292 aa4.63□□□□□ -1.67
SCAF11-214ENST00000550893 CACNG1Q06432 222 aa4.63□□□□□ -1.67
SCAF11-214ENST00000550893 CDC20Q12834 499 aa4.63□□□□□ -1.67
SCAF11-214ENST00000550893 CDH17Q12864 832 aa4.63□□□□□ -1.67
SCAF11-214ENST00000550893 ITIH4Q14624 930 aa4.63□□□□□ -1.67
SCAF11-214ENST00000550893 RPS6KA1Q15418 735 aa4.63□□□□□ -1.67
SCAF11-214ENST00000550893 TRIP13Q15645 432 aaPredicted RBP4.63□□□□□ -1.67
SCAF11-214ENST00000550893 DEFB110Q30KQ9 67 aa4.63□□□□□ -1.67
SCAF11-214ENST00000550893 GPR33Q49SQ1 333 aa4.63□□□□□ -1.67
SCAF11-214ENST00000550893 RNASEH2BQ5TBB1 312 aaKnown RBP4.63□□□□□ -1.67
SCAF11-214ENST00000550893 CDHR3Q6ZTQ4 885 aa4.63□□□□□ -1.67
SCAF11-214ENST00000550893 COX15Q7KZN9 410 aa4.63□□□□□ -1.67
SCAF11-214ENST00000550893 SLC9B2Q86UD5 537 aa4.63□□□□□ -1.67
SCAF11-214ENST00000550893 CTAGE6Q86UF2 777 aa4.63□□□□□ -1.67
SCAF11-214ENST00000550893 SLC22A15Q8IZD6 547 aa4.63□□□□□ -1.67
SCAF11-214ENST00000550893 SYCE1Q8N0S2 351 aa4.63□□□□□ -1.67
SCAF11-214ENST00000550893 NDUFAF2Q8N183 169 aa4.63□□□□□ -1.67
SCAF11-214ENST00000550893 OR2C3Q8N628 320 aa4.63□□□□□ -1.67
SCAF11-214ENST00000550893 UBL4BQ8N7F7 174 aa4.63□□□□□ -1.67
SCAF11-214ENST00000550893 PAF1Q8N7H5 531 aa4.63□□□□□ -1.67
SCAF11-214ENST00000550893 AVL9Q8NBF6 648 aa4.63□□□□□ -1.67
SCAF11-214ENST00000550893 CCDC112Q8NEF3 446 aa4.63□□□□□ -1.67
SCAF11-214ENST00000550893 OR10G6Q8NH81 332 aa4.63□□□□□ -1.67
SCAF11-214ENST00000550893 OR1L3Q8NH93 324 aa4.63□□□□□ -1.67
SCAF11-214ENST00000550893 CT55Q8WUE5 264 aa4.63□□□□□ -1.67
SCAF11-214ENST00000550893 NCSTNQ92542 709 aa4.63□□□□□ -1.67
SCAF11-214ENST00000550893 SLCO2A1Q92959 643 aa4.63□□□□□ -1.67
SCAF11-214ENST00000550893 TMEM159Q96B96 161 aa4.63□□□□□ -1.67
SCAF11-214ENST00000550893 SLC45A3Q96JT2 553 aa4.63□□□□□ -1.67
SCAF11-214ENST00000550893 C12orf66Q96MD2 445 aa4.63□□□□□ -1.67
SCAF11-214ENST00000550893 ZNF285Q96NJ3 590 aa4.63□□□□□ -1.67
SCAF11-214ENST00000550893 SERPINB12Q96P63 405 aa4.63□□□□□ -1.67
SCAF11-214ENST00000550893 IL17FQ96PD4 163 aa4.63□□□□□ -1.67
SCAF11-214ENST00000550893 TRAPPC9Q96Q05 1148 aa4.63□□□□□ -1.67
SCAF11-214ENST00000550893 COPS8Q99627 209 aa4.63□□□□□ -1.67
SCAF11-214ENST00000550893 CMKLR1Q99788 373 aa4.63□□□□□ -1.67
SCAF11-214ENST00000550893 HGH1Q9BTY7 390 aa4.63□□□□□ -1.67
SCAF11-214ENST00000550893 TUBB6Q9BUF5 446 aa4.63□□□□□ -1.67
SCAF11-214ENST00000550893 AP1M1Q9BXS5 423 aa4.63□□□□□ -1.67
SCAF11-214ENST00000550893 STRADBQ9C0K7 418 aa4.63□□□□□ -1.67
SCAF11-214ENST00000550893 MRM3Q9HC36 420 aaKnown RBP4.63□□□□□ -1.67
SCAF11-214ENST00000550893 IMP3Q9NV31 184 aaKnown RBP4.63□□□□□ -1.67
SCAF11-214ENST00000550893 SLC39A1Q9NY26 324 aa4.63□□□□□ -1.67
SCAF11-214ENST00000550893 AAR2Q9Y312 384 aaKnown RBP4.63□□□□□ -1.67
SCAF11-214ENST00000550893 DTNAQ9Y4J8 743 aa4.63□□□□□ -1.67
SCAF11-214ENST00000550893 POLEQ07864 2286 aa4.63□□□□□ -1.67
SCAF11-214ENST00000550893 CELSR1Q9NYQ6 3014 aa4.63□□□□□ -1.67
SCAF11-214ENST00000550893 PDZD2O15018 2839 aa4.63□□□□□ -1.67
SCAF11-214ENST00000550893 EML6Q6ZMW3 1958 aa4.62□□□□□ -1.67
SCAF11-214ENST00000550893 TRBV5-3A0A0A0MS03 114 aa4.62□□□□□ -1.67
SCAF11-214ENST00000550893 OR6C74A6NCV1 312 aa4.62□□□□□ -1.67
SCAF11-214ENST00000550893 C2orf81A6NN90 581 aa4.62□□□□□ -1.67
SCAF11-214ENST00000550893 ERI2A8K979 691 aaKnown RBP4.62□□□□□ -1.67
SCAF11-214ENST00000550893 ARHGEF33A8MVX0 844 aa4.62□□□□□ -1.67
SCAF11-214ENST00000550893 STMND1H3BQB6 276 aa4.62□□□□□ -1.67
SCAF11-214ENST00000550893 TOX3O15405 576 aaPredicted RBP4.62□□□□□ -1.67
SCAF11-214ENST00000550893 KRT86O43790 486 aa4.62□□□□□ -1.67
SCAF11-214ENST00000550893 CTSVO60911 334 aa4.62□□□□□ -1.67
SCAF11-214ENST00000550893 SPAG6O75602 509 aa4.62□□□□□ -1.67
SCAF11-214ENST00000550893 KLF7O75840 302 aaPredicted RBP4.62□□□□□ -1.67
SCAF11-214ENST00000550893 KIAA0754O94854 1291 aa4.62□□□□□ -1.67
SCAF11-214ENST00000550893 SLCO2B1O94956 709 aa4.62□□□□□ -1.67
SCAF11-214ENST00000550893 TOMM40O96008 361 aa4.62□□□□□ -1.67
SCAF11-214ENST00000550893 IFNB1P01574 187 aa4.62□□□□□ -1.67
SCAF11-214ENST00000550893 CRYABP02511 175 aaKnown RBP4.62□□□□□ -1.67
SCAF11-214ENST00000550893 POLBP06746 335 aa4.62□□□□□ -1.67
SCAF11-214ENST00000550893 APRTP07741 180 aa4.62□□□□□ -1.67
SCAF11-214ENST00000550893 ITGA5P08648 1049 aa4.62□□□□□ -1.67
SCAF11-214ENST00000550893 RNF224P0DH78 156 aa4.62□□□□□ -1.67
SCAF11-214ENST00000550893 UGT2B7P16662 529 aa4.62□□□□□ -1.67
SCAF11-214ENST00000550893 POLR2CP19387 275 aaPredicted RBP4.62□□□□□ -1.67
SCAF11-214ENST00000550893 MSH3P20585 1137 aa4.62□□□□□ -1.67
SCAF11-214ENST00000550893 IDSP22304 550 aa4.62□□□□□ -1.67
SCAF11-214ENST00000550893 RPS3P23396 243 aaKnown RBP eCLIP4.62□□□□□ -1.67
SCAF11-214ENST00000550893 NFKBIAP25963 317 aa4.62□□□□□ -1.67
SCAF11-214ENST00000550893 CD82P27701 267 aa4.62□□□□□ -1.67
SCAF11-214ENST00000550893 RBMS1P29558 406 aaKnown RBP4.62□□□□□ -1.67
SCAF11-214ENST00000550893 AKT1P31749 480 aa4.62□□□□□ -1.67
SCAF11-214ENST00000550893 FDFT1P37268 417 aa4.62□□□□□ -1.67
SCAF11-214ENST00000550893 COILP38432 576 aaPredicted RBP4.62□□□□□ -1.67
SCAF11-214ENST00000550893 BDKRB1P46663 353 aa4.62□□□□□ -1.67
SCAF11-214ENST00000550893 LMAN1P49257 510 aa4.62□□□□□ -1.67
SCAF11-214ENST00000550893 MPP1Q00013 466 aa4.62□□□□□ -1.67
SCAF11-214ENST00000550893 FASTKQ14296 549 aaKnown RBP4.62□□□□□ -1.67
SCAF11-214ENST00000550893 FASTKD3Q14CZ7 662 aaKnown RBP4.62□□□□□ -1.67
SCAF11-214ENST00000550893 KYNUQ16719 465 aa4.62□□□□□ -1.67
SCAF11-214ENST00000550893 GLE1Q53GS7 698 aaKnown RBP4.62□□□□□ -1.67
SCAF11-214ENST00000550893 ZRANB3Q5FWF4 1079 aa4.62□□□□□ -1.67
SCAF11-214ENST00000550893 PLEKHS1Q5SXH7 462 aa4.62□□□□□ -1.67
SCAF11-214ENST00000550893 SEL1L2Q5TEA6 688 aa4.62□□□□□ -1.67
SCAF11-214ENST00000550893 IZUMO3Q5VZ72 239 aa4.62□□□□□ -1.67
SCAF11-214ENST00000550893 ZDHHC20Q5W0Z9 365 aa4.62□□□□□ -1.67
SCAF11-214ENST00000550893 KIAA0930Q6ICG6 404 aaPredicted RBP4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms