RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 ILKAPQ9H0C8 392 aaPredicted RBP17.73■□□□□ 0.43
PDLIM7-204ENST00000393546 TUBB1Q9H4B7 451 aa17.73■□□□□ 0.43
PDLIM7-204ENST00000393546 LRTM1Q9HBL6 345 aa17.73■□□□□ 0.43
PDLIM7-204ENST00000393546 PFDN4Q9NQP4 134 aa17.73■□□□□ 0.43
PDLIM7-204ENST00000393546 C1orf109Q9NX04 203 aa17.73■□□□□ 0.43
PDLIM7-204ENST00000393546 DLGAP4Q9Y2H0 992 aa17.73■□□□□ 0.43
PDLIM7-204ENST00000393546 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.73■□□□□ 0.43
PDLIM7-204ENST00000393546 PTGDR2Q9Y5Y4 395 aa17.73■□□□□ 0.43
PDLIM7-204ENST00000393546 DYTNA2CJ06 578 aa17.72■□□□□ 0.43
PDLIM7-204ENST00000393546 NPIPB8E9PQR5 432 aa17.72■□□□□ 0.43
PDLIM7-204ENST00000393546 SUV39H1O43463 412 aa17.72■□□□□ 0.43
PDLIM7-204ENST00000393546 OR10H2O60403 315 aa17.72■□□□□ 0.43
PDLIM7-204ENST00000393546 LYPLA1O75608 230 aaPredicted RBP17.72■□□□□ 0.43
PDLIM7-204ENST00000393546 SLC35E2P0CK97 266 aa17.72■□□□□ 0.43
PDLIM7-204ENST00000393546 DRD2P14416 443 aa17.72■□□□□ 0.43
PDLIM7-204ENST00000393546 PRPH2P23942 346 aa17.72■□□□□ 0.43
PDLIM7-204ENST00000393546 ALDH9A1P49189 494 aa17.72■□□□□ 0.43
PDLIM7-204ENST00000393546 GPR143P51810 404 aa17.72■□□□□ 0.43
PDLIM7-204ENST00000393546 XKP51811 444 aa17.72■□□□□ 0.43
PDLIM7-204ENST00000393546 HEPACAMQ14CZ8 416 aa17.72■□□□□ 0.43
PDLIM7-204ENST00000393546 NR6A1Q15406 480 aa17.72■□□□□ 0.43
PDLIM7-204ENST00000393546 NADK2Q4G0N4 442 aa17.72■□□□□ 0.43
PDLIM7-204ENST00000393546 ACER2Q5QJU3 275 aa17.72■□□□□ 0.43
PDLIM7-204ENST00000393546 CES4AQ5XG92 561 aa17.72■□□□□ 0.43
PDLIM7-204ENST00000393546 FCRLBQ6BAA4 426 aa17.72■□□□□ 0.43
PDLIM7-204ENST00000393546 NOXRED1Q6NXP6 359 aa17.72■□□□□ 0.43
PDLIM7-204ENST00000393546 SLC48A1Q6P1K1 146 aa17.72■□□□□ 0.43
PDLIM7-204ENST00000393546 Q6ZSR9 355 aa17.72■□□□□ 0.43
PDLIM7-204ENST00000393546 RPS19BP1Q86WX3 136 aaKnown RBP17.72■□□□□ 0.43
PDLIM7-204ENST00000393546 CRLF3Q8IUI8 442 aa17.72■□□□□ 0.43
PDLIM7-204ENST00000393546 APCDD1LQ8NCL9 501 aa17.72■□□□□ 0.43
PDLIM7-204ENST00000393546 HAS2Q92819 552 aa17.72■□□□□ 0.43
PDLIM7-204ENST00000393546 CCT7Q99832 543 aa17.72■□□□□ 0.43
PDLIM7-204ENST00000393546 EBPLQ9BY08 206 aa17.72■□□□□ 0.43
PDLIM7-204ENST00000393546 OR8D2Q9GZM6 311 aa17.72■□□□□ 0.43
PDLIM7-204ENST00000393546 CDCP1Q9H5V8 836 aa17.72■□□□□ 0.43
PDLIM7-204ENST00000393546 ABI3Q9P2A4 366 aa17.72■□□□□ 0.43
PDLIM7-204ENST00000393546 CES1P1Q9UKY3 287 aa17.72■□□□□ 0.43
PDLIM7-204ENST00000393546 RAP2CQ9Y3L5 183 aa17.72■□□□□ 0.43
PDLIM7-204ENST00000393546 TRBV11-1A0A0K0K1C0 115 aa17.71■□□□□ 0.43
PDLIM7-204ENST00000393546 PIP5K1BO14986 540 aa17.71■□□□□ 0.43
PDLIM7-204ENST00000393546 ZFAND5O76080 213 aa17.71■□□□□ 0.43
PDLIM7-204ENST00000393546 IL3P08700 152 aa17.71■□□□□ 0.43
PDLIM7-204ENST00000393546 GALNSP34059 522 aa17.71■□□□□ 0.43
PDLIM7-204ENST00000393546 ARG2P78540 354 aa17.71■□□□□ 0.43
PDLIM7-204ENST00000393546 PRICKLE2Q7Z3G6 844 aa17.71■□□□□ 0.43
PDLIM7-204ENST00000393546 ZNF605Q86T29 641 aa17.71■□□□□ 0.43
PDLIM7-204ENST00000393546 TRIM42Q8IWZ5 723 aa17.71■□□□□ 0.43
PDLIM7-204ENST00000393546 KIRREL3Q8IZU9 778 aa17.71■□□□□ 0.43
PDLIM7-204ENST00000393546 OR1N1Q8NGS0 311 aa17.71■□□□□ 0.43
PDLIM7-204ENST00000393546 PNPLA2Q96AD5 504 aa17.71■□□□□ 0.43
PDLIM7-204ENST00000393546 SENP5Q96HI0 755 aaPredicted RBP17.71■□□□□ 0.43
PDLIM7-204ENST00000393546 ART5Q96L15 291 aa17.71■□□□□ 0.43
PDLIM7-204ENST00000393546 SH3GL2Q99962 352 aa17.71■□□□□ 0.43
PDLIM7-204ENST00000393546 ZNF395Q9H8N7 513 aaPredicted RBP17.71■□□□□ 0.43
PDLIM7-204ENST00000393546 PLA2G3Q9NZ20 509 aa17.71■□□□□ 0.43
PDLIM7-204ENST00000393546 B3GNT3Q9Y2A9 372 aa17.71■□□□□ 0.43
PDLIM7-204ENST00000393546 WBP11Q9Y2W2 641 aaKnown RBP17.71■□□□□ 0.43
PDLIM7-204ENST00000393546 POLR3HQ9Y535 204 aaPredicted RBP17.71■□□□□ 0.43
PDLIM7-204ENST00000393546 BAHCC1Q9P281 2608 aa17.7■□□□□ 0.42
PDLIM7-204ENST00000393546 BSNQ9UPA5 3926 aa17.7■□□□□ 0.42
PDLIM7-204ENST00000393546 ERAL1O75616 437 aaKnown RBP17.7■□□□□ 0.42
PDLIM7-204ENST00000393546 DDAH2O95865 285 aa17.7■□□□□ 0.42
PDLIM7-204ENST00000393546 WDPCPO95876 746 aa17.7■□□□□ 0.42
PDLIM7-204ENST00000393546 PORP16435 677 aaPredicted RBP17.7■□□□□ 0.42
PDLIM7-204ENST00000393546 CASRP41180 1078 aa17.7■□□□□ 0.42
PDLIM7-204ENST00000393546 CD97P48960 835 aa17.7■□□□□ 0.42
PDLIM7-204ENST00000393546 ZNF763Q0D2J5 394 aa17.7■□□□□ 0.42
PDLIM7-204ENST00000393546 C2orf80Q0P641 193 aa17.7■□□□□ 0.42
PDLIM7-204ENST00000393546 KIAA0040Q15053 153 aa17.7■□□□□ 0.42
PDLIM7-204ENST00000393546 PLEKHN1Q494U1 663 aaPredicted RBP17.7■□□□□ 0.42
PDLIM7-204ENST00000393546 TTMPQ5BVD1 217 aa17.7■□□□□ 0.42
PDLIM7-204ENST00000393546 COLEC12Q5KU26 742 aa17.7■□□□□ 0.42
PDLIM7-204ENST00000393546 SLC6A19Q695T7 634 aa17.7■□□□□ 0.42
PDLIM7-204ENST00000393546 Q6ZS92 163 aa17.7■□□□□ 0.42
PDLIM7-204ENST00000393546 MMP21Q8N119 569 aa17.7■□□□□ 0.42
PDLIM7-204ENST00000393546 LGI4Q8N135 537 aa17.7■□□□□ 0.42
PDLIM7-204ENST00000393546 OR2T11Q8NH01 316 aa17.7■□□□□ 0.42
PDLIM7-204ENST00000393546 SLC2A12Q8TD20 617 aa17.7■□□□□ 0.42
PDLIM7-204ENST00000393546 RIT1Q92963 219 aa17.7■□□□□ 0.42
PDLIM7-204ENST00000393546 PPP3R2Q96LZ3 170 aa17.7■□□□□ 0.42
PDLIM7-204ENST00000393546 RNF32Q9H0A6 362 aa17.7■□□□□ 0.42
PDLIM7-204ENST00000393546 SLAMF7Q9NQ25 335 aa17.7■□□□□ 0.42
PDLIM7-204ENST00000393546 COPS7AQ9UBW8 275 aa17.7■□□□□ 0.42
PDLIM7-204ENST00000393546 ZNF780BQ9Y6R6 833 aa17.7■□□□□ 0.42
PDLIM7-204ENST00000393546 CROCCQ5TZA2 2017 aa17.7■□□□□ 0.42
PDLIM7-204ENST00000393546 HMGB1P1B2RPK0 211 aaPredicted RBP17.69■□□□□ 0.42
PDLIM7-204ENST00000393546 CDK2AP1O14519 115 aa17.69■□□□□ 0.42
PDLIM7-204ENST00000393546 LSM1O15116 133 aaKnown RBP17.69■□□□□ 0.42
PDLIM7-204ENST00000393546 CPMP14384 443 aa17.69■□□□□ 0.42
PDLIM7-204ENST00000393546 CSNK2A2P19784 350 aaPredicted RBP17.69■□□□□ 0.42
PDLIM7-204ENST00000393546 RPL14P50914 215 aaKnown RBP17.69■□□□□ 0.42
PDLIM7-204ENST00000393546 BST1Q10588 318 aa17.69■□□□□ 0.42
PDLIM7-204ENST00000393546 ZNF267Q14586 743 aaPredicted RBP17.69■□□□□ 0.42
PDLIM7-204ENST00000393546 TLR1Q15399 786 aa17.69■□□□□ 0.42
PDLIM7-204ENST00000393546 GALNTL6Q49A17 601 aa17.69■□□□□ 0.42
PDLIM7-204ENST00000393546 ATG16L1Q676U5 607 aa17.69■□□□□ 0.42
PDLIM7-204ENST00000393546 HSDL2Q6YN16 418 aa17.69■□□□□ 0.42
PDLIM7-204ENST00000393546 DGAT2L6Q6ZPD8 337 aa17.69■□□□□ 0.42
PDLIM7-204ENST00000393546 BEST3Q8N1M1 668 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms