RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.15■□□□□ 0.18
FOXA1-201ENST00000250448 SSX1Q16384 188 aa16.15■□□□□ 0.18
FOXA1-201ENST00000250448 ZNF852Q6ZMS4 543 aa16.15■□□□□ 0.18
FOXA1-201ENST00000250448 UTS2BQ765I0 119 aa16.15■□□□□ 0.18
FOXA1-201ENST00000250448 THOC6Q86W42 341 aaKnown RBP16.15■□□□□ 0.18
FOXA1-201ENST00000250448 WDR36Q8NI36 951 aaKnown RBP16.15■□□□□ 0.18
FOXA1-201ENST00000250448 CXorf40AQ8TE69 158 aa16.15■□□□□ 0.18
FOXA1-201ENST00000250448 COQ8BQ96D53 544 aa16.15■□□□□ 0.18
FOXA1-201ENST00000250448 METTL2AQ96IZ6 378 aaKnown RBP16.15■□□□□ 0.18
FOXA1-201ENST00000250448 SH3BP4Q9P0V3 963 aa16.15■□□□□ 0.18
FOXA1-201ENST00000250448 PRKAB1Q9Y478 270 aa16.15■□□□□ 0.18
FOXA1-201ENST00000250448 SH3D21A4FU49 640 aa16.15■□□□□ 0.18
FOXA1-201ENST00000250448 J3KTA2 159 aa16.15■□□□□ 0.18
FOXA1-201ENST00000250448 TNFRSF21O75509 655 aa16.15■□□□□ 0.18
FOXA1-201ENST00000250448 GPX5O75715 221 aa16.15■□□□□ 0.18
FOXA1-201ENST00000250448 CCNB2O95067 398 aa16.15■□□□□ 0.18
FOXA1-201ENST00000250448 KLF8O95600 359 aaPredicted RBP16.15■□□□□ 0.18
FOXA1-201ENST00000250448 KRT75O95678 551 aa16.15■□□□□ 0.18
FOXA1-201ENST00000250448 POU2F1P14859 743 aa16.15■□□□□ 0.18
FOXA1-201ENST00000250448 ITGA2P17301 1181 aa16.15■□□□□ 0.18
FOXA1-201ENST00000250448 COL9A1P20849 921 aa16.15■□□□□ 0.18
FOXA1-201ENST00000250448 TNFSF8P32971 234 aa16.15■□□□□ 0.18
FOXA1-201ENST00000250448 GPR1P46091 355 aa16.15■□□□□ 0.18
FOXA1-201ENST00000250448 TMEM115Q12893 351 aaPredicted RBP16.15■□□□□ 0.18
FOXA1-201ENST00000250448 SCARB2Q14108 478 aa16.15■□□□□ 0.18
FOXA1-201ENST00000250448 DOC2BQ14184 412 aa16.15■□□□□ 0.18
FOXA1-201ENST00000250448 STARD3Q14849 445 aa16.15■□□□□ 0.18
FOXA1-201ENST00000250448 AGBL4Q5VU57 503 aa16.15■□□□□ 0.18
FOXA1-201ENST00000250448 NXNL2Q5VZ03 156 aa16.15■□□□□ 0.18
FOXA1-201ENST00000250448 GRHL2Q6ISB3 625 aa16.15■□□□□ 0.18
FOXA1-201ENST00000250448 SLC44A3Q8N4M1 653 aa16.15■□□□□ 0.18
FOXA1-201ENST00000250448 IL17RCQ8NAC3 791 aa16.15■□□□□ 0.18
FOXA1-201ENST00000250448 NFKBIDQ8NI38 313 aa16.15■□□□□ 0.18
FOXA1-201ENST00000250448 SETD6Q8TBK2 473 aa16.15■□□□□ 0.18
FOXA1-201ENST00000250448 GTPBP3Q969Y2 492 aaKnown RBP16.15■□□□□ 0.18
FOXA1-201ENST00000250448 TRNT1Q96Q11 434 aaKnown RBP16.15■□□□□ 0.18
FOXA1-201ENST00000250448 TAPBPLQ9BX59 468 aa16.15■□□□□ 0.18
FOXA1-201ENST00000250448 OR2AG1Q9H205 316 aa16.15■□□□□ 0.18
FOXA1-201ENST00000250448 PRM3Q9NNZ6 103 aa16.15■□□□□ 0.18
FOXA1-201ENST00000250448 DDX28Q9NUL7 540 aaKnown RBP16.15■□□□□ 0.18
FOXA1-201ENST00000250448 GPATCH2Q9NW75 528 aa16.15■□□□□ 0.18
FOXA1-201ENST00000250448 CKAP5Q14008 2032 aa16.14■□□□□ 0.18
FOXA1-201ENST00000250448 MGAT4DA6NG13 374 aa16.14■□□□□ 0.17
FOXA1-201ENST00000250448 PCDH17O14917 1159 aa16.14■□□□□ 0.17
FOXA1-201ENST00000250448 COL19A1Q14993 1142 aa16.14■□□□□ 0.17
FOXA1-201ENST00000250448 PTGES3Q15185 160 aaKnown RBP16.14■□□□□ 0.17
FOXA1-201ENST00000250448 ADNP2Q6IQ32 1131 aa16.14■□□□□ 0.17
FOXA1-201ENST00000250448 Q7L0L9 218 aa16.14■□□□□ 0.17
FOXA1-201ENST00000250448 NRARPQ7Z6K4 114 aa16.14■□□□□ 0.17
FOXA1-201ENST00000250448 RAVER1Q8IY67 606 aaKnown RBP16.14■□□□□ 0.17
FOXA1-201ENST00000250448 GPR156Q8NFN8 814 aa16.14■□□□□ 0.17
FOXA1-201ENST00000250448 SNX18Q96RF0 628 aa16.14■□□□□ 0.17
FOXA1-201ENST00000250448 MAPKAP1Q9BPZ7 522 aa16.14■□□□□ 0.17
FOXA1-201ENST00000250448 NDEL1Q9GZM8 345 aa16.14■□□□□ 0.17
FOXA1-201ENST00000250448 RSPH9Q9H1X1 276 aaPredicted RBP16.14■□□□□ 0.17
FOXA1-201ENST00000250448 MARCH7Q9H992 704 aa16.14■□□□□ 0.17
FOXA1-201ENST00000250448 C3orf14Q9HBI5 128 aa16.14■□□□□ 0.17
FOXA1-201ENST00000250448 SGK2Q9HBY8 427 aa16.14■□□□□ 0.17
FOXA1-201ENST00000250448 CD93Q9NPY3 652 aa16.14■□□□□ 0.17
FOXA1-201ENST00000250448 ANKRD34BA5PLL1 514 aa16.14■□□□□ 0.17
FOXA1-201ENST00000250448 H0YIV9 168 aa16.14■□□□□ 0.17
FOXA1-201ENST00000250448 RNASET2O00584 256 aaKnown RBP16.14■□□□□ 0.17
FOXA1-201ENST00000250448 MFN2O95140 757 aa16.14■□□□□ 0.17
FOXA1-201ENST00000250448 GPR50Q13585 617 aa16.14■□□□□ 0.17
FOXA1-201ENST00000250448 ZNF385BQ569K4 471 aa16.14■□□□□ 0.17
FOXA1-201ENST00000250448 TMEM220Q6QAJ8 160 aa16.14■□□□□ 0.17
FOXA1-201ENST00000250448 RNF130Q86XS8 419 aa16.14■□□□□ 0.17
FOXA1-201ENST00000250448 BRF2Q9HAW0 419 aa16.14■□□□□ 0.17
FOXA1-201ENST00000250448 CLN6Q9NWW5 311 aa16.14■□□□□ 0.17
FOXA1-201ENST00000250448 FTSJ1Q9UET6 329 aa16.14■□□□□ 0.17
FOXA1-201ENST00000250448 ENOPH1Q9UHY7 261 aa16.14■□□□□ 0.17
FOXA1-201ENST00000250448 HCN4Q9Y3Q4 1203 aa16.14■□□□□ 0.17
FOXA1-201ENST00000250448 PCCBP05166 539 aa16.13■□□□□ 0.17
FOXA1-201ENST00000250448 CBLP22681 906 aa16.13■□□□□ 0.17
FOXA1-201ENST00000250448 HNF4AP41235 474 aa16.13■□□□□ 0.17
FOXA1-201ENST00000250448 CAMK2BQ13554 666 aa16.13■□□□□ 0.17
FOXA1-201ENST00000250448 ENPP2Q13822 863 aa16.13■□□□□ 0.17
FOXA1-201ENST00000250448 ELOAQ14241 798 aaKnown RBP16.13■□□□□ 0.17
FOXA1-201ENST00000250448 CYP27C1Q4G0S4 372 aa16.13■□□□□ 0.17
FOXA1-201ENST00000250448 TMEM31Q5JXX7 168 aa16.13■□□□□ 0.17
FOXA1-201ENST00000250448 PLAG1Q6DJT9 500 aa16.13■□□□□ 0.17
FOXA1-201ENST00000250448 ZNF517Q6ZMY9 492 aaPredicted RBP16.13■□□□□ 0.17
FOXA1-201ENST00000250448 KRT73Q86Y46 540 aa16.13■□□□□ 0.17
FOXA1-201ENST00000250448 GEMIN6Q8WXD5 167 aaKnown RBP16.13■□□□□ 0.17
FOXA1-201ENST00000250448 OPALINQ96PE5 141 aa16.13■□□□□ 0.17
FOXA1-201ENST00000250448 PIP5K1AQ99755 562 aa16.13■□□□□ 0.17
FOXA1-201ENST00000250448 ACER3Q9NUN7 267 aa16.13■□□□□ 0.17
FOXA1-201ENST00000250448 PCYT1BQ9Y5K3 369 aaPredicted RBP16.13■□□□□ 0.17
FOXA1-201ENST00000250448 GNG14A0A1W2PPG7 69 aa16.13■□□□□ 0.17
FOXA1-201ENST00000250448 AP3D1O14617 1153 aa16.13■□□□□ 0.17
FOXA1-201ENST00000250448 TIA1P31483 386 aaKnown RBP eCLIP16.13■□□□□ 0.174e-6■■■■□ 21.8
FOXA1-201ENST00000250448 XCR1P46094 333 aa16.13■□□□□ 0.17
FOXA1-201ENST00000250448 LIMS1P48059 325 aa16.13■□□□□ 0.17
FOXA1-201ENST00000250448 FAM46CQ5VWP2 391 aa16.13■□□□□ 0.17
FOXA1-201ENST00000250448 PTCHD4Q6ZW05 846 aa16.13■□□□□ 0.17
FOXA1-201ENST00000250448 GATAD2AQ86YP4 633 aa16.13■□□□□ 0.17
FOXA1-201ENST00000250448 SLC44A2Q8IWA5 706 aaPredicted RBP16.13■□□□□ 0.17
FOXA1-201ENST00000250448 PSD4Q8NDX1 1056 aa16.13■□□□□ 0.17
FOXA1-201ENST00000250448 OR52N2Q8NGI0 321 aa16.13■□□□□ 0.17
FOXA1-201ENST00000250448 NEDD4LQ96PU5 975 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms