RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 BCL2L15Q5TBC7 163 aa15.72■□□□□ 0.11
TPM1-228ENST00000560975 ZNF770Q6IQ21 691 aaPredicted RBP15.72■□□□□ 0.11
TPM1-228ENST00000560975 FAM180BQ6P0A1 224 aa15.72■□□□□ 0.11
TPM1-228ENST00000560975 B3GLCTQ6Y288 498 aa15.72■□□□□ 0.11
TPM1-228ENST00000560975 SHFQ7M4L6 423 aa15.72■□□□□ 0.11
TPM1-228ENST00000560975 DDX53Q86TM3 631 aaKnown RBP15.72■□□□□ 0.11
TPM1-228ENST00000560975 HUS1BQ8NHY5 278 aa15.72■□□□□ 0.11
TPM1-228ENST00000560975 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.72■□□□□ 0.11
TPM1-228ENST00000560975 ADAM2Q99965 735 aa15.72■□□□□ 0.11
TPM1-228ENST00000560975 LINC00597Q9H2U6 94 aa15.72■□□□□ 0.11
TPM1-228ENST00000560975 LHX3Q9UBR4 397 aa15.72■□□□□ 0.11
TPM1-228ENST00000560975 PCDHB7Q9Y5E2 793 aa15.72■□□□□ 0.11
TPM1-228ENST00000560975 KCNE2Q9Y6J6 123 aa15.72■□□□□ 0.11
TPM1-228ENST00000560975 CHD5Q8TDI0 1954 aa15.71■□□□□ 0.11
TPM1-228ENST00000560975 A0A0A6YYJ9 748 aa15.71■□□□□ 0.11
TPM1-228ENST00000560975 LZTS3O60299 673 aaPredicted RBP15.71■□□□□ 0.11
TPM1-228ENST00000560975 CTRB1P17538 263 aa15.71■□□□□ 0.11
TPM1-228ENST00000560975 DDCP20711 480 aa15.71■□□□□ 0.11
TPM1-228ENST00000560975 SDHBP21912 280 aa15.71■□□□□ 0.11
TPM1-228ENST00000560975 SLC6A12P48065 614 aa15.71■□□□□ 0.11
TPM1-228ENST00000560975 FABP5Q01469 135 aa15.71■□□□□ 0.11
TPM1-228ENST00000560975 SNTA1Q13424 505 aa15.71■□□□□ 0.11
TPM1-228ENST00000560975 FGFBP1Q14512 234 aa15.71■□□□□ 0.11
TPM1-228ENST00000560975 ANXA8L1Q5VT79 327 aa15.71■□□□□ 0.11
TPM1-228ENST00000560975 CTRB2Q6GPI1 263 aa15.71■□□□□ 0.11
TPM1-228ENST00000560975 OTOP2Q7RTS6 562 aa15.71■□□□□ 0.11
TPM1-228ENST00000560975 MRPL10Q7Z7H8 261 aaKnown RBP15.71■□□□□ 0.11
TPM1-228ENST00000560975 FCRL1Q96LA6 429 aa15.71■□□□□ 0.11
TPM1-228ENST00000560975 MED28Q9H204 178 aa15.71■□□□□ 0.11
TPM1-228ENST00000560975 GKN1Q9NS71 199 aa15.71■□□□□ 0.11
TPM1-228ENST00000560975 ING4Q9UNL4 249 aa15.71■□□□□ 0.11
TPM1-228ENST00000560975 NCKAP1Q9Y2A7 1128 aa15.71■□□□□ 0.11
TPM1-228ENST00000560975 PCDHGB7Q9Y5F8 929 aa15.71■□□□□ 0.11
TPM1-228ENST00000560975 TRAV6A0A075B6T7 132 aa15.71■□□□□ 0.11
TPM1-228ENST00000560975 A8MVJ9 347 aa15.71■□□□□ 0.11
TPM1-228ENST00000560975 E7EQ34 232 aa15.71■□□□□ 0.11
TPM1-228ENST00000560975 RFXAPO00287 272 aa15.71■□□□□ 0.11
TPM1-228ENST00000560975 PRKYO43930 277 aa15.71■□□□□ 0.11
TPM1-228ENST00000560975 GJB5O95377 273 aa15.71■□□□□ 0.11
TPM1-228ENST00000560975 CPEP16870 476 aa15.71■□□□□ 0.11
TPM1-228ENST00000560975 NAGAP17050 411 aa15.71■□□□□ 0.11
TPM1-228ENST00000560975 RHCEP18577 417 aa15.71■□□□□ 0.11
TPM1-228ENST00000560975 LHCGRP22888 699 aa15.71■□□□□ 0.11
TPM1-228ENST00000560975 SSTR2P30874 369 aa15.71■□□□□ 0.11
TPM1-228ENST00000560975 OR1G1P47890 313 aa15.71■□□□□ 0.11
TPM1-228ENST00000560975 HMGA2P52926 109 aa15.71■□□□□ 0.11
TPM1-228ENST00000560975 MC1RQ01726 317 aa15.71■□□□□ 0.11
TPM1-228ENST00000560975 INSL4Q14641 139 aa15.71■□□□□ 0.11
TPM1-228ENST00000560975 RPS26P11Q5JNZ5 115 aaPredicted RBP15.71■□□□□ 0.11
TPM1-228ENST00000560975 TSPAN33Q86UF1 283 aa15.71■□□□□ 0.11
TPM1-228ENST00000560975 NXPE1Q8N323 547 aa15.71■□□□□ 0.11
TPM1-228ENST00000560975 SLC43A3Q8NBI5 491 aa15.71■□□□□ 0.11
TPM1-228ENST00000560975 HTATIP2Q9BUP3 242 aa15.71■□□□□ 0.11
TPM1-228ENST00000560975 CDCP1Q9H5V8 836 aa15.71■□□□□ 0.11
TPM1-228ENST00000560975 HCN2Q9UL51 889 aa15.71■□□□□ 0.11
TPM1-228ENST00000560975 CDH10Q9Y6N8 788 aa15.71■□□□□ 0.11
TPM1-228ENST00000560975 TDRD15B5MCY1 1934 aaKnown RBP15.71■□□□□ 0.1
TPM1-228ENST00000560975 PITPNM1O00562 1244 aa15.7■□□□□ 0.1
TPM1-228ENST00000560975 SLC30A4O14863 429 aa15.7■□□□□ 0.1
TPM1-228ENST00000560975 CLDN11O75508 207 aa15.7■□□□□ 0.1
TPM1-228ENST00000560975 SLC11A2P49281 568 aa15.7■□□□□ 0.1
TPM1-228ENST00000560975 SF3A2Q15428 464 aaKnown RBP15.7■□□□□ 0.1
TPM1-228ENST00000560975 POLR2J3Q9H1A7 115 aaKnown RBP15.7■□□□□ 0.1
TPM1-228ENST00000560975 TRIM77I1YAP6 450 aa15.7■□□□□ 0.1
TPM1-228ENST00000560975 FZD6O60353 706 aa15.7■□□□□ 0.1
TPM1-228ENST00000560975 RECKO95980 971 aa15.7■□□□□ 0.1
TPM1-228ENST00000560975 HLA-DQB1P01920 261 aa15.7■□□□□ 0.1
TPM1-228ENST00000560975 HNF1BP35680 557 aa15.7■□□□□ 0.1
TPM1-228ENST00000560975 RPA4Q13156 261 aa15.7■□□□□ 0.1
TPM1-228ENST00000560975 DOC2AQ14183 400 aa15.7■□□□□ 0.1
TPM1-228ENST00000560975 GRB14Q14449 540 aa15.7■□□□□ 0.1
TPM1-228ENST00000560975 PUM1Q14671 1186 aaKnown RBP eCLIP15.7■□□□□ 0.15e-9■□□□□ 8.1
TPM1-228ENST00000560975 SLC5A12Q1EHB4 618 aa15.7■□□□□ 0.1
TPM1-228ENST00000560975 PLK5Q496M5 336 aa15.7■□□□□ 0.1
TPM1-228ENST00000560975 CTXN3Q4LDR2 81 aa15.7■□□□□ 0.1
TPM1-228ENST00000560975 UNC5DQ6UXZ4 953 aa15.7■□□□□ 0.1
TPM1-228ENST00000560975 KCTD20Q7Z5Y7 419 aa15.7■□□□□ 0.1
TPM1-228ENST00000560975 OR11H4Q8NGC9 324 aa15.7■□□□□ 0.1
TPM1-228ENST00000560975 AP2M1Q96CW1 435 aa15.7■□□□□ 0.1
TPM1-228ENST00000560975 SENP5Q96HI0 755 aaPredicted RBP15.7■□□□□ 0.1
TPM1-228ENST00000560975 GPR137Q96N19 417 aa15.7■□□□□ 0.1
TPM1-228ENST00000560975 SAMD11Q96NU1 681 aa15.7■□□□□ 0.1
TPM1-228ENST00000560975 AP5M1Q9H0R1 490 aa15.7■□□□□ 0.1
TPM1-228ENST00000560975 SGK2Q9HBY8 427 aa15.7■□□□□ 0.1
TPM1-228ENST00000560975 RABL2AQ9UBK7 228 aaPredicted RBP15.7■□□□□ 0.1
TPM1-228ENST00000560975 DSPPQ9NZW4 1301 aa15.7■□□□□ 0.1
TPM1-228ENST00000560975 ATP6V1G2-DDX39BF2Z307 99 aa15.69■□□□□ 0.1
TPM1-228ENST00000560975 CHP2O43745 196 aa15.69■□□□□ 0.1
TPM1-228ENST00000560975 DDNO94850 711 aaPredicted RBP15.69■□□□□ 0.1
TPM1-228ENST00000560975 RAB36O95755 333 aa15.69■□□□□ 0.1
TPM1-228ENST00000560975 SYPP08247 313 aa15.69■□□□□ 0.1
TPM1-228ENST00000560975 CD79BP40259 229 aa15.69■□□□□ 0.1
TPM1-228ENST00000560975 CPT1AP50416 773 aa15.69■□□□□ 0.1
TPM1-228ENST00000560975 PFN3P60673 137 aa15.69■□□□□ 0.1
TPM1-228ENST00000560975 CSTF1Q05048 431 aaKnown RBP15.69■□□□□ 0.1
TPM1-228ENST00000560975 BCL2L1Q07817 233 aa15.69■□□□□ 0.1
TPM1-228ENST00000560975 MFSD13AQ14CX5 517 aa15.69■□□□□ 0.1
TPM1-228ENST00000560975 ANGPT1Q15389 498 aa15.69■□□□□ 0.1
TPM1-228ENST00000560975 LRRC17Q8N6Y2 441 aa15.69■□□□□ 0.1
TPM1-228ENST00000560975 OR8J1Q8NGP2 316 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms