RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 SLC1A2P43004 574 aa4.51□□□□□ -1.69
ATXN3-246ENST00000557030 LEPRP48357 1165 aaKnown RBP4.51□□□□□ -1.69
ATXN3-246ENST00000557030 ARCN1P48444 511 aaKnown RBP4.51□□□□□ -1.69
ATXN3-246ENST00000557030 SERPINB10P48595 397 aa4.51□□□□□ -1.69
ATXN3-246ENST00000557030 THBS3P49746 956 aa4.51□□□□□ -1.69
ATXN3-246ENST00000557030 KCNK10P57789 538 aa4.51□□□□□ -1.69
ATXN3-246ENST00000557030 DAOAP59103 153 aa4.51□□□□□ -1.69
ATXN3-246ENST00000557030 TAS2R39P59534 338 aa4.51□□□□□ -1.69
ATXN3-246ENST00000557030 RPS3AP61247 264 aaKnown RBP4.51□□□□□ -1.69
ATXN3-246ENST00000557030 HERVK_113P63132 956 aa4.51□□□□□ -1.69
ATXN3-246ENST00000557030 ADARB1P78563 741 aaKnown RBP4.51□□□□□ -1.69
ATXN3-246ENST00000557030 PMPCAQ10713 525 aa4.51□□□□□ -1.69
ATXN3-246ENST00000557030 NME3Q13232 169 aa4.51□□□□□ -1.69
ATXN3-246ENST00000557030 PMS2P3Q13401 168 aa4.51□□□□□ -1.69
ATXN3-246ENST00000557030 TGFBIQ15582 683 aa4.51□□□□□ -1.69
ATXN3-246ENST00000557030 CYP51A1Q16850 503 aa4.51□□□□□ -1.69
ATXN3-246ENST00000557030 ZNF470Q6ECI4 717 aa4.51□□□□□ -1.69
ATXN3-246ENST00000557030 ANKRD26P1Q6NSI1 321 aa4.51□□□□□ -1.69
ATXN3-246ENST00000557030 NOTUMQ6P988 496 aa4.51□□□□□ -1.69
ATXN3-246ENST00000557030 TMEM26Q6ZUK4 368 aa4.51□□□□□ -1.69
ATXN3-246ENST00000557030 CATSPER4Q7RTX7 472 aa4.51□□□□□ -1.69
ATXN3-246ENST00000557030 RNF144BQ7Z419 303 aa4.51□□□□□ -1.69
ATXN3-246ENST00000557030 PTAR1Q7Z6K3 402 aaPredicted RBP4.51□□□□□ -1.69
ATXN3-246ENST00000557030 PIGZQ86VD9 579 aa4.51□□□□□ -1.69
ATXN3-246ENST00000557030 KLBQ86Z14 1044 aa4.51□□□□□ -1.69
ATXN3-246ENST00000557030 EPHX4Q8IUS5 362 aa4.51□□□□□ -1.69
ATXN3-246ENST00000557030 DCP1BQ8IZD4 617 aaKnown RBP4.51□□□□□ -1.69
ATXN3-246ENST00000557030 ATPAF2Q8N5M1 289 aa4.51□□□□□ -1.69
ATXN3-246ENST00000557030 TMEM217Q8N7C4 229 aa4.51□□□□□ -1.69
ATXN3-246ENST00000557030 SCAIQ8N9R8 606 aa4.51□□□□□ -1.69
ATXN3-246ENST00000557030 NAXEQ8NCW5 288 aa4.51□□□□□ -1.69
ATXN3-246ENST00000557030 ACVR1CQ8NER5 493 aa4.51□□□□□ -1.69
ATXN3-246ENST00000557030 FAM110DQ8TAY7 271 aaPredicted RBP4.51□□□□□ -1.69
ATXN3-246ENST00000557030 HMGCLL1Q8TB92 370 aa4.51□□□□□ -1.69
ATXN3-246ENST00000557030 HDAC2Q92769 488 aaKnown RBP4.51□□□□□ -1.69
ATXN3-246ENST00000557030 IL12RB2Q99665 862 aa4.51□□□□□ -1.69
ATXN3-246ENST00000557030 KCTD14Q9BQ13 255 aaPredicted RBP4.51□□□□□ -1.69
ATXN3-246ENST00000557030 PSD2Q9BQI7 771 aa4.51□□□□□ -1.69
ATXN3-246ENST00000557030 FICDQ9BVA6 458 aa4.51□□□□□ -1.69
ATXN3-246ENST00000557030 ERVK-6Q9BXR3 956 aa4.51□□□□□ -1.69
ATXN3-246ENST00000557030 NUSAP1Q9BXS6 441 aaKnown RBP4.51□□□□□ -1.69
ATXN3-246ENST00000557030 FAM49AQ9H0Q0 323 aaPredicted RBP4.51□□□□□ -1.69
ATXN3-246ENST00000557030 FAM234AQ9H0X4 552 aa4.51□□□□□ -1.69
ATXN3-246ENST00000557030 ING2Q9H160 280 aa4.51□□□□□ -1.69
ATXN3-246ENST00000557030 NXF3Q9H4D5 531 aaKnown RBP4.51□□□□□ -1.69
ATXN3-246ENST00000557030 CATSPERBQ9H7T0 1116 aa4.51□□□□□ -1.69
ATXN3-246ENST00000557030 LIN28AQ9H9Z2 209 aaKnown RBP4.51□□□□□ -1.69
ATXN3-246ENST00000557030 POPDC3Q9HBV1 291 aa4.51□□□□□ -1.69
ATXN3-246ENST00000557030 ANKHQ9HCJ1 492 aa4.51□□□□□ -1.69
ATXN3-246ENST00000557030 ZNF304Q9HCX3 659 aa4.51□□□□□ -1.69
ATXN3-246ENST00000557030 HPS4Q9NQG7 708 aa4.51□□□□□ -1.69
ATXN3-246ENST00000557030 TREX1Q9NSU2 369 aa4.51□□□□□ -1.69
ATXN3-246ENST00000557030 PIGVQ9NUD9 493 aa4.51□□□□□ -1.69
ATXN3-246ENST00000557030 SELENONQ9NZV5 590 aa4.51□□□□□ -1.69
ATXN3-246ENST00000557030 CDC14AQ9UNH5 594 aa4.51□□□□□ -1.69
ATXN3-246ENST00000557030 AURKCQ9UQB9 309 aa4.51□□□□□ -1.69
ATXN3-246ENST00000557030 CRYL1Q9Y2S2 319 aa4.51□□□□□ -1.69
ATXN3-246ENST00000557030 AP3M1Q9Y2T2 418 aa4.51□□□□□ -1.69
ATXN3-246ENST00000557030 TDRKHQ9Y2W6 561 aaKnown RBP4.51□□□□□ -1.69
ATXN3-246ENST00000557030 FIS1Q9Y3D6 152 aa4.51□□□□□ -1.69
ATXN3-246ENST00000557030 HES2Q9Y543 173 aa4.51□□□□□ -1.69
ATXN3-246ENST00000557030 SNX5Q9Y5X3 404 aa4.51□□□□□ -1.69
ATXN3-246ENST00000557030 CUL9Q8IWT3 2517 aa4.51□□□□□ -1.69
ATXN3-246ENST00000557030 SCN1AP35498 2009 aa4.51□□□□□ -1.69
ATXN3-246ENST00000557030 NRCAMQ92823 1304 aa4.5□□□□□ -1.69
ATXN3-246ENST00000557030 UNC79Q9P2D8 2635 aa4.5□□□□□ -1.69
ATXN3-246ENST00000557030 PDCD11Q14690 1871 aaKnown RBP4.5□□□□□ -1.69
ATXN3-246ENST00000557030 SYNJ2BP-COX16A0A087WUM0 186 aa4.5□□□□□ -1.69
ATXN3-246ENST00000557030 SMIM28A0A1B0GU29 152 aa4.5□□□□□ -1.69
ATXN3-246ENST00000557030 HTR3EA5X5Y0 456 aa4.5□□□□□ -1.69
ATXN3-246ENST00000557030 TMEM247A6NEH6 219 aa4.5□□□□□ -1.69
ATXN3-246ENST00000557030 CLDN25C9JDP6 229 aa4.5□□□□□ -1.69
ATXN3-246ENST00000557030 K7EPI3 171 aa4.5□□□□□ -1.69
ATXN3-246ENST00000557030 DLGAP1O14490 977 aa4.5□□□□□ -1.69
ATXN3-246ENST00000557030 AZIN1O14977 448 aa4.5□□□□□ -1.69
ATXN3-246ENST00000557030 SLC22A1O15245 554 aa4.5□□□□□ -1.69
ATXN3-246ENST00000557030 ACOX3O15254 700 aa4.5□□□□□ -1.69
ATXN3-246ENST00000557030 INPP4BO15327 924 aa4.5□□□□□ -1.69
ATXN3-246ENST00000557030 SLC7A4O43246 635 aa4.5□□□□□ -1.69
ATXN3-246ENST00000557030 EEDO75530 441 aaKnown RBP4.5□□□□□ -1.69
ATXN3-246ENST00000557030 NEURL1O76050 574 aa4.5□□□□□ -1.69
ATXN3-246ENST00000557030 CELF2O95319 508 aaKnown RBP4.5□□□□□ -1.69
ATXN3-246ENST00000557030 GNAO1P09471 354 aa4.5□□□□□ -1.69
ATXN3-246ENST00000557030 THRBP10828 461 aa4.5□□□□□ -1.69
ATXN3-246ENST00000557030 CDH1P12830 882 aa4.5□□□□□ -1.69
ATXN3-246ENST00000557030 CD1EP15812 388 aa4.5□□□□□ -1.69
ATXN3-246ENST00000557030 NELFEP18615 380 aaKnown RBP4.5□□□□□ -1.69
ATXN3-246ENST00000557030 S100A1P23297 94 aa4.5□□□□□ -1.69
ATXN3-246ENST00000557030 EEF1B2P24534 225 aaKnown RBP4.5□□□□□ -1.69
ATXN3-246ENST00000557030 LMO2P25791 158 aa4.5□□□□□ -1.69
ATXN3-246ENST00000557030 HOXC8P31273 242 aa4.5□□□□□ -1.69
ATXN3-246ENST00000557030 ADRA1AP35348 466 aa4.5□□□□□ -1.69
ATXN3-246ENST00000557030 LHX1P48742 406 aa4.5□□□□□ -1.69
ATXN3-246ENST00000557030 ALDH7A1P49419 539 aaKnown RBP4.5□□□□□ -1.69
ATXN3-246ENST00000557030 CXCR3P49682 368 aa4.5□□□□□ -1.69
ATXN3-246ENST00000557030 GSK3BP49841 420 aa4.5□□□□□ -1.69
ATXN3-246ENST00000557030 ALDH3A2P51648 485 aa4.5□□□□□ -1.69
ATXN3-246ENST00000557030 CCR5P51681 352 aa4.5□□□□□ -1.69
ATXN3-246ENST00000557030 BMXP51813 675 aa4.5□□□□□ -1.69
ATXN3-246ENST00000557030 TPD52P55327 224 aaPredicted RBP4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms