RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 RANBP3LQ86VV4 465 aaPredicted RBP8.68□□□□□ -1.02
HPS4-208ENST00000464362 KLHL36Q8N4N3 616 aa8.68□□□□□ -1.02
HPS4-208ENST00000464362 SLC37A3Q8NCC5 494 aa8.68□□□□□ -1.02
HPS4-208ENST00000464362 ZNF740Q8NDX6 193 aa8.68□□□□□ -1.02
HPS4-208ENST00000464362 OR5D16Q8NGK9 328 aa8.68□□□□□ -1.02
HPS4-208ENST00000464362 OR8K3Q8NH51 312 aa8.68□□□□□ -1.02
HPS4-208ENST00000464362 WFDC5Q8TCV5 224 aa8.68□□□□□ -1.02
HPS4-208ENST00000464362 TMEM175Q9BSA9 504 aa8.68□□□□□ -1.02
HPS4-208ENST00000464362 KCNN2Q9H2S1 579 aa8.68□□□□□ -1.02
HPS4-208ENST00000464362 OR51I1Q9H343 314 aa8.68□□□□□ -1.02
HPS4-208ENST00000464362 SARDHQ9UL12 918 aa8.68□□□□□ -1.02
HPS4-208ENST00000464362 CLCA1A8K7I4 914 aa8.68□□□□□ -1.02
HPS4-208ENST00000464362 WASH4PA8MWX3 477 aa8.68□□□□□ -1.02
HPS4-208ENST00000464362 WASH3PC4AMC7 463 aa8.68□□□□□ -1.02
HPS4-208ENST00000464362 PSMD9O00233 223 aa8.68□□□□□ -1.02
HPS4-208ENST00000464362 AKAP8O43823 692 aaKnown RBP8.68□□□□□ -1.02
HPS4-208ENST00000464362 SOX30O94993 753 aa8.68□□□□□ -1.02
HPS4-208ENST00000464362 C1QAP02745 245 aa8.68□□□□□ -1.02
HPS4-208ENST00000464362 RHOP08100 348 aa8.68□□□□□ -1.02
HPS4-208ENST00000464362 CA5AP35218 305 aa8.68□□□□□ -1.02
HPS4-208ENST00000464362 AKR1D1P51857 326 aa8.68□□□□□ -1.02
HPS4-208ENST00000464362 FAM214AQ32MH5 1076 aa8.68□□□□□ -1.02
HPS4-208ENST00000464362 KHDRBS2Q5VWX1 349 aaKnown RBP8.68□□□□□ -1.02
HPS4-208ENST00000464362 TUBA3EQ6PEY2 450 aa8.68□□□□□ -1.02
HPS4-208ENST00000464362 OLIG3Q7RTU3 272 aa8.68□□□□□ -1.02
HPS4-208ENST00000464362 PRSS48Q7RTY5 328 aa8.68□□□□□ -1.02
HPS4-208ENST00000464362 OR4K5Q8NGD3 323 aa8.68□□□□□ -1.02
HPS4-208ENST00000464362 OR51L1Q8NGJ5 315 aa8.68□□□□□ -1.02
HPS4-208ENST00000464362 NEIL3Q8TAT5 605 aa8.68□□□□□ -1.02
HPS4-208ENST00000464362 GINS4Q9BRT9 223 aa8.68□□□□□ -1.02
HPS4-208ENST00000464362 IKZF5Q9H5V7 419 aa8.68□□□□□ -1.02
HPS4-208ENST00000464362 ELOVL2Q9NXB9 296 aa8.68□□□□□ -1.02
HPS4-208ENST00000464362 NLKQ9UBE8 527 aa8.68□□□□□ -1.02
HPS4-208ENST00000464362 PPIEQ9UNP9 301 aaKnown RBP8.68□□□□□ -1.02
HPS4-208ENST00000464362 OR1A2Q9Y585 309 aa8.68□□□□□ -1.02
HPS4-208ENST00000464362 ZNF831Q5JPB2 1677 aa8.68□□□□□ -1.02
HPS4-208ENST00000464362 A0A1B0GVT2 93 aa8.68□□□□□ -1.02
HPS4-208ENST00000464362 PCDH17O14917 1159 aa8.68□□□□□ -1.02
HPS4-208ENST00000464362 ACVR1BP36896 505 aa8.68□□□□□ -1.02
HPS4-208ENST00000464362 ERVK-21P61565 698 aa8.68□□□□□ -1.02
HPS4-208ENST00000464362 STXBP1P61764 594 aaKnown RBP8.68□□□□□ -1.02
HPS4-208ENST00000464362 RPL6Q02878 288 aaKnown RBP8.68□□□□□ -1.02
HPS4-208ENST00000464362 ILF3Q12906 894 aaKnown RBP eCLIP8.68□□□□□ -1.02
HPS4-208ENST00000464362 DEFB134Q4QY38 66 aa8.68□□□□□ -1.02
HPS4-208ENST00000464362 ZNF805Q5CZA5 627 aa8.68□□□□□ -1.02
HPS4-208ENST00000464362 DCUN1D3Q8IWE4 304 aa8.68□□□□□ -1.02
HPS4-208ENST00000464362 SAMD12Q8N8I0 201 aa8.68□□□□□ -1.02
HPS4-208ENST00000464362 PAPD5Q8NDF8 572 aaKnown RBP8.68□□□□□ -1.02
HPS4-208ENST00000464362 OR5AR1Q8NGP9 310 aa8.68□□□□□ -1.02
HPS4-208ENST00000464362 C1orf216Q8TAB5 229 aa8.68□□□□□ -1.02
HPS4-208ENST00000464362 MMP28Q9H239 520 aa8.68□□□□□ -1.02
HPS4-208ENST00000464362 NEUROD4Q9HD90 331 aa8.68□□□□□ -1.02
HPS4-208ENST00000464362 NECTIN3Q9NQS3 549 aa8.68□□□□□ -1.02
HPS4-208ENST00000464362 ERVW-1Q9UQF0 538 aa8.68□□□□□ -1.02
HPS4-208ENST00000464362 SPEF1Q9Y4P9 236 aa8.68□□□□□ -1.02
HPS4-208ENST00000464362 ARNTLO00327 626 aa8.68□□□□□ -1.02
HPS4-208ENST00000464362 MMP2P08253 660 aa8.68□□□□□ -1.02
HPS4-208ENST00000464362 TYRP1P17643 537 aa8.68□□□□□ -1.02
HPS4-208ENST00000464362 DDX6P26196 483 aaKnown RBP eCLIP8.68□□□□□ -1.02
HPS4-208ENST00000464362 TGFBR1P36897 503 aa8.68□□□□□ -1.02
HPS4-208ENST00000464362 PROX2Q3B8N5 592 aa8.68□□□□□ -1.02
HPS4-208ENST00000464362 TMEM107Q6UX40 140 aa8.68□□□□□ -1.02
HPS4-208ENST00000464362 VRK3Q8IV63 474 aa8.68□□□□□ -1.02
HPS4-208ENST00000464362 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.68□□□□□ -1.02
HPS4-208ENST00000464362 Q8N9G6 341 aaPredicted RBP8.68□□□□□ -1.02
HPS4-208ENST00000464362 FBXO15Q8NCQ5 510 aaPredicted RBP8.68□□□□□ -1.02
HPS4-208ENST00000464362 TP63Q9H3D4 680 aaPredicted RBP8.68□□□□□ -1.02
HPS4-208ENST00000464362 NMNAT1Q9HAN9 279 aaPredicted RBP8.68□□□□□ -1.02
HPS4-208ENST00000464362 MOV10Q9HCE1 1003 aaKnown RBP8.68□□□□□ -1.02
HPS4-208ENST00000464362 SMURF1Q9HCE7 757 aa8.68□□□□□ -1.02
HPS4-208ENST00000464362 FZD3Q9NPG1 666 aa8.68□□□□□ -1.02
HPS4-208ENST00000464362 FBXL12Q9NXK8 326 aa8.68□□□□□ -1.02
HPS4-208ENST00000464362 CNIH4Q9P003 139 aa8.68□□□□□ -1.02
HPS4-208ENST00000464362 IRGMA1A4Y4 181 aa8.67□□□□□ -1.02
HPS4-208ENST00000464362 MCIDASD6RGH6 385 aa8.67□□□□□ -1.02
HPS4-208ENST00000464362 TSPAN4O14817 238 aa8.67□□□□□ -1.02
HPS4-208ENST00000464362 ACSL1P33121 698 aa8.67□□□□□ -1.02
HPS4-208ENST00000464362 SOX2P48431 317 aa8.67□□□□□ -1.02
HPS4-208ENST00000464362 HBA1P69905 142 aa8.67□□□□□ -1.02
HPS4-208ENST00000464362 SLC5A12Q1EHB4 618 aa8.67□□□□□ -1.02
HPS4-208ENST00000464362 CPZQ66K79 652 aa8.67□□□□□ -1.02
HPS4-208ENST00000464362 RSPO2Q6UXX9 243 aaPredicted RBP8.67□□□□□ -1.02
HPS4-208ENST00000464362 GATSQ8NAP1 163 aa8.67□□□□□ -1.02
HPS4-208ENST00000464362 B3GNT7Q8NFL0 401 aa8.67□□□□□ -1.02
HPS4-208ENST00000464362 BPIFB1Q8TDL5 484 aa8.67□□□□□ -1.02
HPS4-208ENST00000464362 TSEN15Q8WW01 171 aaKnown RBP8.67□□□□□ -1.02
HPS4-208ENST00000464362 CLSTN3Q9BQT9 956 aa8.67□□□□□ -1.02
HPS4-208ENST00000464362 EXTL2Q9UBQ6 330 aa8.67□□□□□ -1.02
HPS4-208ENST00000464362 SEC14L4Q9UDX3 406 aa8.67□□□□□ -1.02
HPS4-208ENST00000464362 RWDD3Q9Y3V2 267 aa8.67□□□□□ -1.02
HPS4-208ENST00000464362 PCDHGB6Q9Y5F9 930 aa8.67□□□□□ -1.02
HPS4-208ENST00000464362 COLEC10Q9Y6Z7 277 aa8.67□□□□□ -1.02
HPS4-208ENST00000464362 ATG2BQ96BY7 2078 aa8.67□□□□□ -1.02
HPS4-208ENST00000464362 TGM5O43548 720 aa8.67□□□□□ -1.02
HPS4-208ENST00000464362 B4GALT2O60909 372 aa8.67□□□□□ -1.02
HPS4-208ENST00000464362 ITGBL1O95965 494 aaPredicted RBP8.67□□□□□ -1.02
HPS4-208ENST00000464362 HLA-DPB1P04440 258 aa8.67□□□□□ -1.02
HPS4-208ENST00000464362 YES1P07947 543 aa8.67□□□□□ -1.02
HPS4-208ENST00000464362 TFPIP10646 304 aa8.67□□□□□ -1.02
HPS4-208ENST00000464362 RPS3P23396 243 aaKnown RBP eCLIP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms