RNA–Protein interactions for RNA: ENST00000425451.2

HDAC7-208, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 621 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-208ENST00000425451 VPS39Q96JC1 886 aa16.19■□□□□ 0.18
HDAC7-208ENST00000425451 GPATCH1Q9BRR8 931 aaKnown RBP16.19■□□□□ 0.18
HDAC7-208ENST00000425451 EFCAB11Q9BUY7 163 aa16.19■□□□□ 0.18
HDAC7-208ENST00000425451 MS4A8Q9BY19 250 aa16.19■□□□□ 0.18
HDAC7-208ENST00000425451 ROGDIQ9GZN7 287 aa16.19■□□□□ 0.18
HDAC7-208ENST00000425451 ZNF703Q9H7S9 590 aaPredicted RBP16.19■□□□□ 0.18
HDAC7-208ENST00000425451 CNOT10Q9H9A5 744 aaKnown RBP16.19■□□□□ 0.18
HDAC7-208ENST00000425451 CAB39LQ9H9S4 337 aa16.19■□□□□ 0.18
HDAC7-208ENST00000425451 SMYD2Q9NRG4 433 aa16.19■□□□□ 0.18
HDAC7-208ENST00000425451 RASSF1Q9NS23 344 aa16.19■□□□□ 0.18
HDAC7-208ENST00000425451 WWOXQ9NZC7 414 aa16.19■□□□□ 0.18
HDAC7-208ENST00000425451 CRIM1Q9NZV1 1036 aa16.19■□□□□ 0.18
HDAC7-208ENST00000425451 PTBP2Q9UKA9 531 aaKnown RBP16.19■□□□□ 0.18
HDAC7-208ENST00000425451 MTO1Q9Y2Z2 717 aaKnown RBP16.19■□□□□ 0.18
HDAC7-208ENST00000425451 NCKAP5O14513 1909 aa16.19■□□□□ 0.18
HDAC7-208ENST00000425451 LRRC3CA6NJW4 275 aa16.18■□□□□ 0.18
HDAC7-208ENST00000425451 SYT5O00445 386 aa16.18■□□□□ 0.18
HDAC7-208ENST00000425451 GABRA1P14867 456 aa16.18■□□□□ 0.18
HDAC7-208ENST00000425451 HIST1H1TP22492 207 aaPredicted RBP16.18■□□□□ 0.18
HDAC7-208ENST00000425451 CASP2P42575 452 aa16.18■□□□□ 0.18
HDAC7-208ENST00000425451 KIR2DL3P43628 341 aa16.18■□□□□ 0.18
HDAC7-208ENST00000425451 STT3AP46977 705 aa16.18■□□□□ 0.18
HDAC7-208ENST00000425451 ARL4CP56559 192 aa16.18■□□□□ 0.18
HDAC7-208ENST00000425451 OR4D1Q15615 310 aa16.18■□□□□ 0.18
HDAC7-208ENST00000425451 CEBPEQ15744 281 aa16.18■□□□□ 0.18
HDAC7-208ENST00000425451 PDK4Q16654 411 aa16.18■□□□□ 0.18
HDAC7-208ENST00000425451 SULT1C3Q6IMI6 304 aa16.18■□□□□ 0.18
HDAC7-208ENST00000425451 GPSM1Q86YR5 675 aa16.18■□□□□ 0.18
HDAC7-208ENST00000425451 LRRC25Q8N386 305 aaPredicted RBP16.18■□□□□ 0.18
HDAC7-208ENST00000425451 SNX31Q8N9S9 440 aa16.18■□□□□ 0.18
HDAC7-208ENST00000425451 SRFBP1Q8NEF9 429 aaKnown RBP16.18■□□□□ 0.18
HDAC7-208ENST00000425451 PPWD1Q96BP3 646 aaKnown RBP16.18■□□□□ 0.18
HDAC7-208ENST00000425451 RUNDC3BQ96NL0 473 aa16.18■□□□□ 0.18
HDAC7-208ENST00000425451 CLEC4MQ9H2X3 399 aaPredicted RBP16.18■□□□□ 0.18
HDAC7-208ENST00000425451 EXO5Q9H790 373 aa16.18■□□□□ 0.18
HDAC7-208ENST00000425451 ACKR4Q9NPB9 350 aa16.18■□□□□ 0.18
HDAC7-208ENST00000425451 TRMT1Q9NXH9 659 aaKnown RBP16.18■□□□□ 0.18
HDAC7-208ENST00000425451 COPS7AQ9UBW8 275 aa16.18■□□□□ 0.18
HDAC7-208ENST00000425451 PCDHGB3Q9Y5G1 929 aa16.18■□□□□ 0.18
HDAC7-208ENST00000425451 FLNAP21333 2647 aaKnown RBP16.18■□□□□ 0.18
HDAC7-208ENST00000425451 FAM47E-STBD1D6RA91 191 aa16.17■□□□□ 0.18
HDAC7-208ENST00000425451 E7ESA3 106 aa16.17■□□□□ 0.18
HDAC7-208ENST00000425451 PROM1O43490 865 aa16.17■□□□□ 0.18
HDAC7-208ENST00000425451 SEC31AO94979 1220 aaKnown RBP16.17■□□□□ 0.18
HDAC7-208ENST00000425451 CCDC166P0CW27 439 aa16.17■□□□□ 0.18
HDAC7-208ENST00000425451 CD1DP15813 335 aa16.17■□□□□ 0.18
HDAC7-208ENST00000425451 MSH2P43246 934 aa16.17■□□□□ 0.18
HDAC7-208ENST00000425451 POU4F1Q01851 419 aa16.17■□□□□ 0.18
HDAC7-208ENST00000425451 PDIA2Q13087 525 aaKnown RBP16.17■□□□□ 0.18
HDAC7-208ENST00000425451 CHIT1Q13231 466 aa16.17■□□□□ 0.18
HDAC7-208ENST00000425451 TBCCQ15814 346 aa16.17■□□□□ 0.18
HDAC7-208ENST00000425451 PRAMEF20Q5VT98 475 aa16.17■□□□□ 0.18
HDAC7-208ENST00000425451 SYDE1Q6ZW31 735 aaPredicted RBP16.17■□□□□ 0.18
HDAC7-208ENST00000425451 ULK2Q8IYT8 1036 aa16.17■□□□□ 0.18
HDAC7-208ENST00000425451 RELL2Q8NC24 303 aaPredicted RBP16.17■□□□□ 0.18
HDAC7-208ENST00000425451 NAXEQ8NCW5 288 aa16.17■□□□□ 0.18
HDAC7-208ENST00000425451 BBOF1Q8ND07 529 aa16.17■□□□□ 0.18
HDAC7-208ENST00000425451 SPACA9Q96E40 222 aaPredicted RBP16.17■□□□□ 0.18
HDAC7-208ENST00000425451 SH3GL2Q99962 352 aa16.17■□□□□ 0.18
HDAC7-208ENST00000425451 SORBS1Q9BX66 1292 aaKnown RBP16.17■□□□□ 0.18
HDAC7-208ENST00000425451 SLC6A15Q9H2J7 730 aa16.17■□□□□ 0.18
HDAC7-208ENST00000425451 ZFP64Q9NPA5 681 aa16.17■□□□□ 0.18
HDAC7-208ENST00000425451 DLL4Q9NR61 685 aa16.17■□□□□ 0.18
HDAC7-208ENST00000425451 B4GALT7Q9UBV7 327 aa16.17■□□□□ 0.18
HDAC7-208ENST00000425451 CHCHD2Q9Y6H1 151 aaPredicted RBP16.17■□□□□ 0.18
HDAC7-208ENST00000425451 ARHGAP21Q5T5U3 1957 aa16.17■□□□□ 0.18
HDAC7-208ENST00000425451 KDM4EB2RXH2 506 aaPredicted RBP16.16■□□□□ 0.18
HDAC7-208ENST00000425451 PHGDHO43175 533 aaKnown RBP16.16■□□□□ 0.18
HDAC7-208ENST00000425451 SH3BGRLO75368 114 aa16.16■□□□□ 0.18
HDAC7-208ENST00000425451 TGFB1P01137 390 aa16.16■□□□□ 0.18
HDAC7-208ENST00000425451 CPN2P22792 545 aa16.16■□□□□ 0.18
HDAC7-208ENST00000425451 KCNJ2P63252 427 aa16.16■□□□□ 0.18
HDAC7-208ENST00000425451 IRF8Q02556 426 aa16.16■□□□□ 0.18
HDAC7-208ENST00000425451 FOXD4Q12950 439 aaPredicted RBP16.16■□□□□ 0.18
HDAC7-208ENST00000425451 CBLBQ13191 982 aa16.16■□□□□ 0.18
HDAC7-208ENST00000425451 LAPTM5Q13571 262 aa16.16■□□□□ 0.18
HDAC7-208ENST00000425451 HIST2H2ACQ16777 129 aaPredicted RBP16.16■□□□□ 0.18
HDAC7-208ENST00000425451 TMEM35AQ53FP2 167 aa16.16■□□□□ 0.18
HDAC7-208ENST00000425451 PAGE2BQ5JRK9 111 aa16.16■□□□□ 0.18
HDAC7-208ENST00000425451 HIST2H2AA3Q6FI13 130 aa16.16■□□□□ 0.18
HDAC7-208ENST00000425451 POMZP3Q6PJE2 187 aa16.16■□□□□ 0.18
HDAC7-208ENST00000425451 CDC20BQ86Y33 519 aa16.16■□□□□ 0.18
HDAC7-208ENST00000425451 LAS2Q8IYD9 372 aa16.16■□□□□ 0.18
HDAC7-208ENST00000425451 FBXW8Q8N3Y1 598 aa16.16■□□□□ 0.18
HDAC7-208ENST00000425451 SLC15A4Q8N697 577 aa16.16■□□□□ 0.18
HDAC7-208ENST00000425451 PDPRQ8NCN5 879 aa16.16■□□□□ 0.18
HDAC7-208ENST00000425451 NEIL3Q8TAT5 605 aa16.16■□□□□ 0.18
HDAC7-208ENST00000425451 SLC22A8Q8TCC7 542 aa16.16■□□□□ 0.18
HDAC7-208ENST00000425451 DOK4Q8TEW6 326 aa16.16■□□□□ 0.18
HDAC7-208ENST00000425451 FBXL20Q96IG2 436 aa16.16■□□□□ 0.18
HDAC7-208ENST00000425451 DGAT2Q96PD7 388 aa16.16■□□□□ 0.18
HDAC7-208ENST00000425451 CD244Q9BZW8 370 aa16.16■□□□□ 0.18
HDAC7-208ENST00000425451 GSX1Q9H4S2 264 aaPredicted RBP16.16■□□□□ 0.18
HDAC7-208ENST00000425451 NSMCE4AQ9NXX6 385 aa16.16■□□□□ 0.18
HDAC7-208ENST00000425451 PLEKHA6Q9Y2H5 1048 aa16.16■□□□□ 0.18
HDAC7-208ENST00000425451 SPACA6W5XKT8 324 aa16.16■□□□□ 0.18
HDAC7-208ENST00000425451 A6NNC1 897 aa16.15■□□□□ 0.18
HDAC7-208ENST00000425451 HSPB2A8KAH6 182 aa16.15■□□□□ 0.18
HDAC7-208ENST00000425451 CXorf49A8MYA2 514 aaPredicted RBP16.15■□□□□ 0.18
HDAC7-208ENST00000425451 SAP18O00422 153 aaKnown RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms