RNA–Protein interactions for RNA: ENST00000298317.8

RPUSD4-201, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD4, Length 2,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-201ENST00000298317 VPS29Q9UBQ0 182 aa12.88□□□□□ -0.35
RPUSD4-201ENST00000298317 SRRDQ9UH36 339 aa12.88□□□□□ -0.35
RPUSD4-201ENST00000298317 HCN2Q9UL51 889 aa12.88□□□□□ -0.35
RPUSD4-201ENST00000298317 MGAT4AQ9UM21 535 aa12.88□□□□□ -0.35
RPUSD4-201ENST00000298317 SPIN1Q9Y657 262 aaPredicted RBP12.88□□□□□ -0.35
RPUSD4-201ENST00000298317 HEPACAM2A8MVW5 462 aa12.87□□□□□ -0.35
RPUSD4-201ENST00000298317 ITGALP20701 1170 aa12.87□□□□□ -0.35
RPUSD4-201ENST00000298317 EVX1P49640 407 aa12.87□□□□□ -0.35
RPUSD4-201ENST00000298317 CDH4P55283 916 aa12.87□□□□□ -0.35
RPUSD4-201ENST00000298317 CAV3P56539 151 aa12.87□□□□□ -0.35
RPUSD4-201ENST00000298317 ALDH6A1Q02252 535 aaKnown RBP12.87□□□□□ -0.35
RPUSD4-201ENST00000298317 ZNF33BQ06732 778 aa12.87□□□□□ -0.35
RPUSD4-201ENST00000298317 TWF1Q12792 350 aa12.87□□□□□ -0.35
RPUSD4-201ENST00000298317 ZNF267Q14586 743 aaPredicted RBP12.87□□□□□ -0.35
RPUSD4-201ENST00000298317 FCN2Q15485 313 aa12.87□□□□□ -0.35
RPUSD4-201ENST00000298317 SF1Q15637 639 aaKnown RBP12.87□□□□□ -0.35
RPUSD4-201ENST00000298317 COL28A1Q2UY09 1125 aa12.87□□□□□ -0.35
RPUSD4-201ENST00000298317 CLLU1Q5K131 121 aa12.87□□□□□ -0.35
RPUSD4-201ENST00000298317 ATAT1Q5SQI0 421 aa12.87□□□□□ -0.35
RPUSD4-201ENST00000298317 BICRALQ6AI39 1079 aa12.87□□□□□ -0.35
RPUSD4-201ENST00000298317 FAM92BQ6ZTR7 304 aa12.87□□□□□ -0.35
RPUSD4-201ENST00000298317 BCDIN3DQ7Z5W3 292 aaKnown RBP12.87□□□□□ -0.35
RPUSD4-201ENST00000298317 LAPTM4BQ86VI4 370 aa12.87□□□□□ -0.35
RPUSD4-201ENST00000298317 ADGRG2Q8IZP9 1017 aa12.87□□□□□ -0.35
RPUSD4-201ENST00000298317 LILRB2Q8N423 598 aa12.87□□□□□ -0.35
RPUSD4-201ENST00000298317 OR52I1Q8NGK6 324 aa12.87□□□□□ -0.35
RPUSD4-201ENST00000298317 OR4A15Q8NGL6 344 aa12.87□□□□□ -0.35
RPUSD4-201ENST00000298317 TM9SF4Q92544 642 aa12.87□□□□□ -0.35
RPUSD4-201ENST00000298317 FBXO32Q969P5 355 aa12.87□□□□□ -0.35
RPUSD4-201ENST00000298317 FUBP3Q96I24 572 aaKnown RBP eCLIP12.87□□□□□ -0.35
RPUSD4-201ENST00000298317 TINF2Q9BSI4 451 aa12.87□□□□□ -0.35
RPUSD4-201ENST00000298317 RERGLQ9H628 205 aa12.87□□□□□ -0.35
RPUSD4-201ENST00000298317 TMEM38AQ9H6F2 299 aa12.87□□□□□ -0.35
RPUSD4-201ENST00000298317 RANBP3Q9H6Z4 567 aaPredicted RBP12.87□□□□□ -0.35
RPUSD4-201ENST00000298317 SPATA6Q9NWH7 488 aaPredicted RBP12.87□□□□□ -0.35
RPUSD4-201ENST00000298317 PCDH10Q9P2E7 1040 aa12.87□□□□□ -0.35
RPUSD4-201ENST00000298317 RHCGQ9UBD6 479 aa12.87□□□□□ -0.35
RPUSD4-201ENST00000298317 A0A0A6YYJ9 748 aa12.87□□□□□ -0.35
RPUSD4-201ENST00000298317 RNASET2O00584 256 aaKnown RBP12.87□□□□□ -0.35
RPUSD4-201ENST00000298317 SMAD6O43541 496 aaKnown RBP12.87□□□□□ -0.35
RPUSD4-201ENST00000298317 SOX14O95416 240 aa12.87□□□□□ -0.35
RPUSD4-201ENST00000298317 RAB36O95755 333 aa12.87□□□□□ -0.35
RPUSD4-201ENST00000298317 IGFBP1P08833 259 aaPredicted RBP12.87□□□□□ -0.35
RPUSD4-201ENST00000298317 ALPIP09923 528 aa12.87□□□□□ -0.35
RPUSD4-201ENST00000298317 IDSP22304 550 aa12.87□□□□□ -0.35
RPUSD4-201ENST00000298317 ETV5P41161 510 aa12.87□□□□□ -0.35
RPUSD4-201ENST00000298317 CASP9P55211 416 aa12.87□□□□□ -0.35
RPUSD4-201ENST00000298317 TUSC3Q13454 348 aa12.87□□□□□ -0.35
RPUSD4-201ENST00000298317 MBTPS1Q14703 1052 aa12.87□□□□□ -0.35
RPUSD4-201ENST00000298317 BRAT1Q6PJG6 821 aa12.87□□□□□ -0.35
RPUSD4-201ENST00000298317 ANGPTL8Q6UXH0 198 aa12.87□□□□□ -0.35
RPUSD4-201ENST00000298317 TAGAPQ8N103 731 aa12.87□□□□□ -0.35
RPUSD4-201ENST00000298317 OR52N2Q8NGI0 321 aa12.87□□□□□ -0.35
RPUSD4-201ENST00000298317 HUS1BQ8NHY5 278 aa12.87□□□□□ -0.35
RPUSD4-201ENST00000298317 SORCS2Q96PQ0 1159 aa12.87□□□□□ -0.35
RPUSD4-201ENST00000298317 ATF6BQ99941 703 aa12.87□□□□□ -0.35
RPUSD4-201ENST00000298317 KCTD5Q9NXV2 234 aa12.87□□□□□ -0.35
RPUSD4-201ENST00000298317 PTTG3PQ9NZH4 202 aa12.87□□□□□ -0.35
RPUSD4-201ENST00000298317 PCDHB8Q9UN66 801 aa12.87□□□□□ -0.35
RPUSD4-201ENST00000298317 PCDHB9Q9Y5E1 797 aa12.87□□□□□ -0.35
RPUSD4-201ENST00000298317 ZNF106Q9H2Y7 1883 aaKnown RBP12.86□□□□□ -0.35
RPUSD4-201ENST00000298317 TRBV4-1A0A0J9YWV2 114 aa12.86□□□□□ -0.35
RPUSD4-201ENST00000298317 CBX4O00257 560 aa12.86□□□□□ -0.35
RPUSD4-201ENST00000298317 CHRM5P08912 532 aaPredicted RBP12.86□□□□□ -0.35
RPUSD4-201ENST00000298317 BPIP17213 487 aa12.86□□□□□ -0.35
RPUSD4-201ENST00000298317 SLC6A1P30531 599 aa12.86□□□□□ -0.35
RPUSD4-201ENST00000298317 HOXC8P31273 242 aa12.86□□□□□ -0.35
RPUSD4-201ENST00000298317 FGF9P31371 208 aaPredicted RBP12.86□□□□□ -0.35
RPUSD4-201ENST00000298317 CLCNKAP51800 687 aa12.86□□□□□ -0.35
RPUSD4-201ENST00000298317 PCBP3P57721 371 aaKnown RBP12.86□□□□□ -0.35
RPUSD4-201ENST00000298317 RAE1P78406 368 aaKnown RBP12.86□□□□□ -0.35
RPUSD4-201ENST00000298317 MRPS6P82932 125 aaKnown RBP12.86□□□□□ -0.35
RPUSD4-201ENST00000298317 ACSM2AQ08AH3 577 aa12.86□□□□□ -0.35
RPUSD4-201ENST00000298317 BAMBIQ13145 260 aa12.86□□□□□ -0.35
RPUSD4-201ENST00000298317 GALEQ14376 348 aa12.86□□□□□ -0.35
RPUSD4-201ENST00000298317 HEPACAMQ14CZ8 416 aa12.86□□□□□ -0.35
RPUSD4-201ENST00000298317 POU4F3Q15319 338 aa12.86□□□□□ -0.35
RPUSD4-201ENST00000298317 GRK1Q15835 563 aa12.86□□□□□ -0.35
RPUSD4-201ENST00000298317 ACSM2BQ68CK6 577 aa12.86□□□□□ -0.35
RPUSD4-201ENST00000298317 CASP12Q6UXS9 341 aa12.86□□□□□ -0.35
RPUSD4-201ENST00000298317 UBE2R2Q712K3 238 aaPredicted RBP12.86□□□□□ -0.35
RPUSD4-201ENST00000298317 PRSS42Q7Z5A4 293 aa12.86□□□□□ -0.35
RPUSD4-201ENST00000298317 CDH24Q86UP0 819 aa12.86□□□□□ -0.35
RPUSD4-201ENST00000298317 TMEM151BQ8IW70 566 aa12.86□□□□□ -0.35
RPUSD4-201ENST00000298317 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.86□□□□□ -0.35
RPUSD4-201ENST00000298317 WDR20Q8TBZ3 569 aa12.86□□□□□ -0.35
RPUSD4-201ENST00000298317 C1GALT1C1Q96EU7 318 aa12.86□□□□□ -0.35
RPUSD4-201ENST00000298317 USB1Q9BQ65 265 aaKnown RBP12.86□□□□□ -0.35
RPUSD4-201ENST00000298317 SLC12A9Q9BXP2 914 aa12.86□□□□□ -0.35
RPUSD4-201ENST00000298317 EMC7Q9NPA0 242 aa12.86□□□□□ -0.35
RPUSD4-201ENST00000298317 IL26Q9NPH9 171 aa12.86□□□□□ -0.35
RPUSD4-201ENST00000298317 TESQ9UGI8 421 aaKnown RBP12.86□□□□□ -0.35
RPUSD4-201ENST00000298317 SLC22A14Q9Y267 594 aa12.86□□□□□ -0.35
RPUSD4-201ENST00000298317 NCKAP1Q9Y2A7 1128 aa12.86□□□□□ -0.35
RPUSD4-201ENST00000298317 SCN8AQ9UQD0 1980 aa12.86□□□□□ -0.35
RPUSD4-201ENST00000298317 TDRD15B5MCY1 1934 aaKnown RBP12.86□□□□□ -0.35
RPUSD4-201ENST00000298317 TSPAN4O14817 238 aa12.86□□□□□ -0.35
RPUSD4-201ENST00000298317 FFAR1O14842 300 aa12.86□□□□□ -0.35
RPUSD4-201ENST00000298317 SLC30A4O14863 429 aa12.86□□□□□ -0.35
RPUSD4-201ENST00000298317 LRRTM2O43300 516 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms