RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 LRRTM3Q86VH5 581 aa7.33□□□□□ -1.24
CCDC60-204ENST00000539847 TRIM69Q86WT6 500 aa7.33□□□□□ -1.24
CCDC60-204ENST00000539847 SNX29P2Q8IUI4 249 aa7.33□□□□□ -1.24
CCDC60-204ENST00000539847 TCTE3Q8IZS6 198 aa7.33□□□□□ -1.24
CCDC60-204ENST00000539847 HS3ST5Q8IZT8 346 aa7.33□□□□□ -1.24
CCDC60-204ENST00000539847 RDH10Q8IZV5 341 aa7.33□□□□□ -1.24
CCDC60-204ENST00000539847 CACTIN-AS1Q8N1I8 211 aa7.33□□□□□ -1.24
CCDC60-204ENST00000539847 CLIP4Q8N3C7 705 aa7.33□□□□□ -1.24
CCDC60-204ENST00000539847 IL22RA1Q8N6P7 574 aa7.33□□□□□ -1.24
CCDC60-204ENST00000539847 CDYL2Q8N8U2 506 aa7.33□□□□□ -1.24
CCDC60-204ENST00000539847 GDPD1Q8N9F7 314 aa7.33□□□□□ -1.24
CCDC60-204ENST00000539847 CEP76Q8TAP6 659 aa7.33□□□□□ -1.24
CCDC60-204ENST00000539847 SH3RF2Q8TEC5 729 aa7.33□□□□□ -1.24
CCDC60-204ENST00000539847 GGHQ92820 318 aa7.33□□□□□ -1.24
CCDC60-204ENST00000539847 USP7Q93009 1102 aa7.33□□□□□ -1.24
CCDC60-204ENST00000539847 EXT2Q93063 718 aa7.33□□□□□ -1.24
CCDC60-204ENST00000539847 TRNT1Q96Q11 434 aaKnown RBP7.33□□□□□ -1.24
CCDC60-204ENST00000539847 OR2A14Q96R47 310 aa7.33□□□□□ -1.24
CCDC60-204ENST00000539847 OR52E6Q96RD3 313 aa7.33□□□□□ -1.24
CCDC60-204ENST00000539847 GPR21Q99679 349 aa7.33□□□□□ -1.24
CCDC60-204ENST00000539847 SCNM1Q9BWG6 230 aa7.33□□□□□ -1.24
CCDC60-204ENST00000539847 TRIM8Q9BZR9 551 aa7.33□□□□□ -1.24
CCDC60-204ENST00000539847 REXO4Q9GZR2 422 aaKnown RBP7.33□□□□□ -1.24
CCDC60-204ENST00000539847 RNF38Q9H0F5 515 aa7.33□□□□□ -1.24
CCDC60-204ENST00000539847 RIBC2Q9H4K1 309 aa7.33□□□□□ -1.24
CCDC60-204ENST00000539847 REEP1Q9H902 201 aa7.33□□□□□ -1.24
CCDC60-204ENST00000539847 SP110Q9HB58 689 aa7.33□□□□□ -1.24
CCDC60-204ENST00000539847 LRTM1Q9HBL6 345 aa7.33□□□□□ -1.24
CCDC60-204ENST00000539847 POLE4Q9NR33 117 aa7.33□□□□□ -1.24
CCDC60-204ENST00000539847 AASDHPPTQ9NRN7 309 aa7.33□□□□□ -1.24
CCDC60-204ENST00000539847 KRT84Q9NSB2 600 aa7.33□□□□□ -1.24
CCDC60-204ENST00000539847 ACOXLQ9NUZ1 547 aa7.33□□□□□ -1.24
CCDC60-204ENST00000539847 TAS2R9Q9NYW1 312 aa7.33□□□□□ -1.24
CCDC60-204ENST00000539847 PHF11Q9UIL8 331 aa7.33□□□□□ -1.24
CCDC60-204ENST00000539847 MMP17Q9ULZ9 603 aa7.33□□□□□ -1.24
CCDC60-204ENST00000539847 PCDHB10Q9UN67 800 aa7.33□□□□□ -1.24
CCDC60-204ENST00000539847 CAB39Q9Y376 341 aaPredicted RBP7.33□□□□□ -1.24
CCDC60-204ENST00000539847 PCDHGA6Q9Y5G7 932 aa7.33□□□□□ -1.24
CCDC60-204ENST00000539847 MAU2Q9Y6X3 613 aa7.33□□□□□ -1.24
CCDC60-204ENST00000539847 V9GYQ6 96 aa7.33□□□□□ -1.24
CCDC60-204ENST00000539847 DMXL2Q8TDJ6 3036 aa7.33□□□□□ -1.24
CCDC60-204ENST00000539847 ABCA7Q8IZY2 2146 aa7.33□□□□□ -1.24
CCDC60-204ENST00000539847 SLC22A31A6NKX4 558 aa7.32□□□□□ -1.24
CCDC60-204ENST00000539847 SLC9A3R1O14745 358 aaPredicted RBP7.32□□□□□ -1.24
CCDC60-204ENST00000539847 SHOXO15266 292 aa7.32□□□□□ -1.24
CCDC60-204ENST00000539847 ARHGEF9O43307 516 aa7.32□□□□□ -1.24
CCDC60-204ENST00000539847 PCDHGA12O60330 932 aa7.32□□□□□ -1.24
CCDC60-204ENST00000539847 MITFO75030 526 aaPredicted RBP7.32□□□□□ -1.24
CCDC60-204ENST00000539847 ULK1O75385 1050 aa7.32□□□□□ -1.24
CCDC60-204ENST00000539847 MFN2O95140 757 aa7.32□□□□□ -1.24
CCDC60-204ENST00000539847 LCKP06239 509 aa7.32□□□□□ -1.24
CCDC60-204ENST00000539847 CKMP06732 381 aa7.32□□□□□ -1.24
CCDC60-204ENST00000539847 CKMT1AP12532 417 aa7.32□□□□□ -1.24
CCDC60-204ENST00000539847 CYP2A7P20853 494 aa7.32□□□□□ -1.24
CCDC60-204ENST00000539847 LPOP22079 712 aaPredicted RBP7.32□□□□□ -1.24
CCDC60-204ENST00000539847 GADD45AP24522 165 aa7.32□□□□□ -1.24
CCDC60-204ENST00000539847 ITGB7P26010 798 aa7.32□□□□□ -1.24
CCDC60-204ENST00000539847 P2RY2P41231 377 aa7.32□□□□□ -1.24
CCDC60-204ENST00000539847 MAP2K3P46734 347 aa7.32□□□□□ -1.24
CCDC60-204ENST00000539847 SEPHS1P49903 392 aa7.32□□□□□ -1.24
CCDC60-204ENST00000539847 AGTR2P50052 363 aa7.32□□□□□ -1.24
CCDC60-204ENST00000539847 MRPS15P82914 257 aaKnown RBP7.32□□□□□ -1.24
CCDC60-204ENST00000539847 RHAGQ02094 409 aa7.32□□□□□ -1.24
CCDC60-204ENST00000539847 SCN1BQ07699 218 aa7.32□□□□□ -1.24
CCDC60-204ENST00000539847 ITKQ08881 620 aa7.32□□□□□ -1.24
CCDC60-204ENST00000539847 DMPKQ09013 629 aa7.32□□□□□ -1.24
CCDC60-204ENST00000539847 TARDBPQ13148 414 aaKnown RBP eCLIP7.32□□□□□ -1.24
CCDC60-204ENST00000539847 IHHQ14623 411 aa7.32□□□□□ -1.24
CCDC60-204ENST00000539847 VMACQ2NL98 169 aa7.32□□□□□ -1.24
CCDC60-204ENST00000539847 FAM174BQ3ZCQ3 159 aa7.32□□□□□ -1.24
CCDC60-204ENST00000539847 IQCCQ4KMZ1 466 aa7.32□□□□□ -1.24
CCDC60-204ENST00000539847 ARMCX4Q5H9R4 360 aa7.32□□□□□ -1.24
CCDC60-204ENST00000539847 RNFT1Q5M7Z0 435 aa7.32□□□□□ -1.24
CCDC60-204ENST00000539847 C10orf62Q5T681 223 aaPredicted RBP7.32□□□□□ -1.24
CCDC60-204ENST00000539847 CDCP2Q5VXM1 449 aa7.32□□□□□ -1.24
CCDC60-204ENST00000539847 OR4F3Q6IEY1 312 aa7.32□□□□□ -1.24
CCDC60-204ENST00000539847 ZCCHC8Q6NZY4 707 aaKnown RBP7.32□□□□□ -1.24
CCDC60-204ENST00000539847 NEK5Q6P3R8 708 aa7.32□□□□□ -1.24
CCDC60-204ENST00000539847 SLC23A3Q6PIS1 610 aa7.32□□□□□ -1.24
CCDC60-204ENST00000539847 ZNF517Q6ZMY9 492 aaPredicted RBP7.32□□□□□ -1.24
CCDC60-204ENST00000539847 GOLGA7Q7Z5G4 137 aa7.32□□□□□ -1.24
CCDC60-204ENST00000539847 PIP4P1Q86T03 277 aa7.32□□□□□ -1.24
CCDC60-204ENST00000539847 SYT12Q8IV01 421 aa7.32□□□□□ -1.24
CCDC60-204ENST00000539847 SYTL1Q8IYJ3 562 aa7.32□□□□□ -1.24
CCDC60-204ENST00000539847 ENTHD1Q8IYW4 607 aa7.32□□□□□ -1.24
CCDC60-204ENST00000539847 BEND7Q8N7W2 519 aaPredicted RBP7.32□□□□□ -1.24
CCDC60-204ENST00000539847 SPERTQ8NA61 448 aa7.32□□□□□ -1.24
CCDC60-204ENST00000539847 FAM83FQ8NEG4 500 aaPredicted RBP7.32□□□□□ -1.24
CCDC60-204ENST00000539847 OR4F6Q8NGB9 312 aa7.32□□□□□ -1.24
CCDC60-204ENST00000539847 ZNF675Q8TD23 568 aa7.32□□□□□ -1.24
CCDC60-204ENST00000539847 CD200R1Q8TD46 325 aa7.32□□□□□ -1.24
CCDC60-204ENST00000539847 GPBAR1Q8TDU6 330 aa7.32□□□□□ -1.24
CCDC60-204ENST00000539847 APH1BQ8WW43 257 aa7.32□□□□□ -1.24
CCDC60-204ENST00000539847 ZCCHC14Q8WYQ9 949 aaKnown RBP7.32□□□□□ -1.24
CCDC60-204ENST00000539847 KLHL6Q8WZ60 621 aa7.32□□□□□ -1.24
CCDC60-204ENST00000539847 SLC7A6Q92536 515 aa7.32□□□□□ -1.24
CCDC60-204ENST00000539847 KISS1RQ969F8 398 aaPredicted RBP7.32□□□□□ -1.24
CCDC60-204ENST00000539847 MYLPFQ96A32 169 aa7.32□□□□□ -1.24
CCDC60-204ENST00000539847 HMCESQ96FZ2 354 aa7.32□□□□□ -1.24
CCDC60-204ENST00000539847 RNF170Q96K19 258 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms