RNA–Protein interactions for RNA: ENST00000463097.1

COPS3-205, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 288 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-205ENST00000463097 CTNNA3Q9UI47 895 aa5.13□□□□□ -1.59
COPS3-205ENST00000463097 GRID1Q9ULK0 1009 aa5.13□□□□□ -1.59
COPS3-205ENST00000463097 DIMT1Q9UNQ2 313 aaKnown RBP5.13□□□□□ -1.59
COPS3-205ENST00000463097 FOXJ3Q9UPW0 622 aa5.13□□□□□ -1.59
COPS3-205ENST00000463097 ZBED9Q6R2W3 1325 aa5.13□□□□□ -1.59
COPS3-205ENST00000463097 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.12□□□□□ -1.59
COPS3-205ENST00000463097 TRBV4-1A0A0J9YWV2 114 aa5.12□□□□□ -1.59
COPS3-205ENST00000463097 CD8B2A6NJW9 211 aa5.12□□□□□ -1.59
COPS3-205ENST00000463097 CXCL11O14625 94 aa5.12□□□□□ -1.59
COPS3-205ENST00000463097 P2RX6O15547 441 aa5.12□□□□□ -1.59
COPS3-205ENST00000463097 KRT86O43790 486 aa5.12□□□□□ -1.59
COPS3-205ENST00000463097 EML2O95834 649 aa5.12□□□□□ -1.59
COPS3-205ENST00000463097 HMBSP08397 361 aa5.12□□□□□ -1.59
COPS3-205ENST00000463097 HTR2AP28223 471 aa5.12□□□□□ -1.59
COPS3-205ENST00000463097 TMOD1P28289 359 aa5.12□□□□□ -1.59
COPS3-205ENST00000463097 PTPN4P29074 926 aa5.12□□□□□ -1.59
COPS3-205ENST00000463097 PTGER3P43115 390 aa5.12□□□□□ -1.59
COPS3-205ENST00000463097 SLC1A6P48664 564 aa5.12□□□□□ -1.59
COPS3-205ENST00000463097 DCDC1P59894 354 aa5.12□□□□□ -1.59
COPS3-205ENST00000463097 UBE2HP62256 183 aa5.12□□□□□ -1.59
COPS3-205ENST00000463097 KRT81Q14533 505 aa5.12□□□□□ -1.59
COPS3-205ENST00000463097 PDK4Q16654 411 aa5.12□□□□□ -1.59
COPS3-205ENST00000463097 TMEM207Q6UWW9 146 aa5.12□□□□□ -1.59
COPS3-205ENST00000463097 PIGZQ86VD9 579 aa5.12□□□□□ -1.59
COPS3-205ENST00000463097 KRTAP19-1Q8IUB9 90 aa5.12□□□□□ -1.59
COPS3-205ENST00000463097 ZNF679Q8IYX0 411 aa5.12□□□□□ -1.59
COPS3-205ENST00000463097 ZNF843Q8N446 348 aa5.12□□□□□ -1.59
COPS3-205ENST00000463097 IQCF1Q8N6M8 205 aa5.12□□□□□ -1.59
COPS3-205ENST00000463097 TCEANCQ8N8B7 351 aa5.12□□□□□ -1.59
COPS3-205ENST00000463097 STEAP2Q8NFT2 490 aa5.12□□□□□ -1.59
COPS3-205ENST00000463097 OR2T3Q8NH03 318 aa5.12□□□□□ -1.59
COPS3-205ENST00000463097 TMEM143Q96AN5 459 aa5.12□□□□□ -1.59
COPS3-205ENST00000463097 ST6GAL2Q96JF0 529 aa5.12□□□□□ -1.59
COPS3-205ENST00000463097 IL12RB2Q99665 862 aa5.12□□□□□ -1.59
COPS3-205ENST00000463097 WWP1Q9H0M0 922 aa5.12□□□□□ -1.59
COPS3-205ENST00000463097 FAF1Q9UNN5 650 aaPredicted RBP5.12□□□□□ -1.59
COPS3-205ENST00000463097 MAB21L2Q9Y586 359 aa5.12□□□□□ -1.59
COPS3-205ENST00000463097 C15orf38-AP3S2A0A0A6YYH1 394 aa5.11□□□□□ -1.59
COPS3-205ENST00000463097 SH3PXD2BA1X283 911 aa5.11□□□□□ -1.59
COPS3-205ENST00000463097 K7EQM0 130 aa5.11□□□□□ -1.59
COPS3-205ENST00000463097 CCSO14618 274 aa5.11□□□□□ -1.59
COPS3-205ENST00000463097 NUDT21O43809 227 aaKnown RBP5.11□□□□□ -1.59
COPS3-205ENST00000463097 EXTL3O43909 919 aa5.11□□□□□ -1.59
COPS3-205ENST00000463097 ZBTB11O95625 1053 aaPredicted RBP5.11□□□□□ -1.59
COPS3-205ENST00000463097 TSHBP01222 138 aa5.11□□□□□ -1.59
COPS3-205ENST00000463097 IQCF3P0C7M6 154 aa5.11□□□□□ -1.59
COPS3-205ENST00000463097 RPA2P15927 270 aa5.11□□□□□ -1.59
COPS3-205ENST00000463097 CEACAM8P31997 349 aaPredicted RBP5.11□□□□□ -1.59
COPS3-205ENST00000463097 PTGFRP43088 359 aa5.11□□□□□ -1.59
COPS3-205ENST00000463097 LBX1P52954 281 aa5.11□□□□□ -1.59
COPS3-205ENST00000463097 SRSF9Q13242 221 aaKnown RBP eCLIP5.11□□□□□ -1.59
COPS3-205ENST00000463097 ZSWIM7Q19AV6 140 aa5.11□□□□□ -1.59
COPS3-205ENST00000463097 C17orf64Q86WR6 236 aa5.11□□□□□ -1.59
COPS3-205ENST00000463097 METTL27Q8N6F8 245 aaPredicted RBP5.11□□□□□ -1.59
COPS3-205ENST00000463097 ADAD2Q8NCV1 583 aaKnown RBP5.11□□□□□ -1.59
COPS3-205ENST00000463097 TRIM58Q8NG06 486 aa5.11□□□□□ -1.59
COPS3-205ENST00000463097 GPR148Q8TDV2 347 aa5.11□□□□□ -1.59
COPS3-205ENST00000463097 TMEM37Q8WXS4 190 aa5.11□□□□□ -1.59
COPS3-205ENST00000463097 PINX1Q96BK5 328 aaKnown RBP5.11□□□□□ -1.59
COPS3-205ENST00000463097 TUBGCP3Q96CW5 907 aa5.11□□□□□ -1.59
COPS3-205ENST00000463097 IGSF21Q96ID5 467 aa5.11□□□□□ -1.59
COPS3-205ENST00000463097 PKNOX2Q96KN3 472 aa5.11□□□□□ -1.59
COPS3-205ENST00000463097 C4orf36Q96KX1 117 aa5.11□□□□□ -1.59
COPS3-205ENST00000463097 C10orf90Q96M02 699 aa5.11□□□□□ -1.59
COPS3-205ENST00000463097 ZNF607Q96SK3 696 aa5.11□□□□□ -1.59
COPS3-205ENST00000463097 NDUFAF3Q9BU61 184 aa5.11□□□□□ -1.59
COPS3-205ENST00000463097 WRAP53Q9BUR4 548 aaKnown RBP5.11□□□□□ -1.59
COPS3-205ENST00000463097 FAM124BQ9H5Z6 455 aaPredicted RBP5.11□□□□□ -1.59
COPS3-205ENST00000463097 LRRC40Q9H9A6 602 aa5.11□□□□□ -1.59
COPS3-205ENST00000463097 P2RX2Q9UBL9 471 aa5.11□□□□□ -1.59
COPS3-205ENST00000463097 ZNF490Q9ULM2 529 aaPredicted RBP5.11□□□□□ -1.59
COPS3-205ENST00000463097 KIF7Q2M1P5 1343 aa5.11□□□□□ -1.59
COPS3-205ENST00000463097 RAB3GAP2Q9H2M9 1393 aa5.11□□□□□ -1.59
COPS3-205ENST00000463097 FHAD1B1AJZ9 1412 aa5.11□□□□□ -1.59
COPS3-205ENST00000463097 PTPRUQ92729 1446 aa5.11□□□□□ -1.59
COPS3-205ENST00000463097 FGD5Q6ZNL6 1462 aa5.11□□□□□ -1.59
COPS3-205ENST00000463097 SYNJ1O43426 1573 aa5.11□□□□□ -1.59
COPS3-205ENST00000463097 A0A087WUV0 522 aaPredicted RBP5.1□□□□□ -1.59
COPS3-205ENST00000463097 A0A087WZ39 114 aa5.1□□□□□ -1.59
COPS3-205ENST00000463097 WDR97A6NE52 1622 aa5.1□□□□□ -1.59
COPS3-205ENST00000463097 PRRG2O14669 202 aa5.1□□□□□ -1.59
COPS3-205ENST00000463097 GPRIN2O60269 458 aa5.1□□□□□ -1.59
COPS3-205ENST00000463097 SF3B1O75533 1304 aaKnown RBP eCLIP5.1□□□□□ -1.593e-6■■■■■ 137.9
COPS3-205ENST00000463097 GLRA1P23415 457 aa5.1□□□□□ -1.59
COPS3-205ENST00000463097 PTPN6P29350 595 aa5.1□□□□□ -1.59
COPS3-205ENST00000463097 AXLP30530 894 aa5.1□□□□□ -1.59
COPS3-205ENST00000463097 NPY2RP49146 381 aa5.1□□□□□ -1.59
COPS3-205ENST00000463097 LTBQ06643 244 aa5.1□□□□□ -1.59
COPS3-205ENST00000463097 TRIP10Q15642 601 aa5.1□□□□□ -1.59
COPS3-205ENST00000463097 C3AR1Q16581 482 aa5.1□□□□□ -1.59
COPS3-205ENST00000463097 CLPPQ16740 277 aaPredicted RBP5.1□□□□□ -1.59
COPS3-205ENST00000463097 TECRLQ5HYJ1 363 aa5.1□□□□□ -1.59
COPS3-205ENST00000463097 CAPRIN2Q6IMN6 1127 aaKnown RBP5.1□□□□□ -1.59
COPS3-205ENST00000463097 NIPAL3Q6P499 406 aa5.1□□□□□ -1.59
COPS3-205ENST00000463097 SYCE2Q6PIF2 218 aa5.1□□□□□ -1.59
COPS3-205ENST00000463097 SMG6Q86US8 1419 aaKnown RBP5.1□□□□□ -1.59
COPS3-205ENST00000463097 CACUL1Q86Y37 369 aa5.1□□□□□ -1.59
COPS3-205ENST00000463097 ZDHHC17Q8IUH5 632 aa5.1□□□□□ -1.59
COPS3-205ENST00000463097 PARP8Q8N3A8 854 aa5.1□□□□□ -1.59
COPS3-205ENST00000463097 EIF1ADQ8N9N8 165 aaKnown RBP5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms