RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 CDRT1O95170 752 aa13.04□□□□□ -0.32
C9orf47-203ENST00000375851 ATXN1LP0C7T5 689 aaKnown RBP13.04□□□□□ -0.32
C9orf47-203ENST00000375851 GP1BBP13224 206 aa13.04□□□□□ -0.32
C9orf47-203ENST00000375851 ACSL1P33121 698 aa13.04□□□□□ -0.32
C9orf47-203ENST00000375851 TSPAN5P62079 268 aa13.04□□□□□ -0.32
C9orf47-203ENST00000375851 COL9A2Q14055 689 aaPredicted RBP13.04□□□□□ -0.32
C9orf47-203ENST00000375851 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.04□□□□□ -0.32
C9orf47-203ENST00000375851 ZNF404Q494X3 552 aa13.04□□□□□ -0.32
C9orf47-203ENST00000375851 OR4C11Q6IEV9 310 aa13.04□□□□□ -0.32
C9orf47-203ENST00000375851 SLC27A4Q6P1M0 643 aa13.04□□□□□ -0.32
C9orf47-203ENST00000375851 TMEM107Q6UX40 140 aa13.04□□□□□ -0.32
C9orf47-203ENST00000375851 SLC36A4Q6YBV0 504 aa13.04□□□□□ -0.32
C9orf47-203ENST00000375851 CSNK1A1LQ8N752 337 aa13.04□□□□□ -0.32
C9orf47-203ENST00000375851 LINC01465Q8N7H1 131 aa13.04□□□□□ -0.32
C9orf47-203ENST00000375851 OR4K17Q8NGC6 315 aa13.04□□□□□ -0.32
C9orf47-203ENST00000375851 OR5AR1Q8NGP9 310 aa13.04□□□□□ -0.32
C9orf47-203ENST00000375851 NT5C3BQ969T7 300 aa13.04□□□□□ -0.32
C9orf47-203ENST00000375851 COQ8BQ96D53 544 aa13.04□□□□□ -0.32
C9orf47-203ENST00000375851 PRODH2Q9UF12 536 aa13.04□□□□□ -0.32
C9orf47-203ENST00000375851 DDX60Q8IY21 1712 aaKnown RBP13.04□□□□□ -0.32
C9orf47-203ENST00000375851 ZNF182P17025 639 aaPredicted RBP13.04□□□□□ -0.32
C9orf47-203ENST00000375851 HOXD9P28356 352 aaPredicted RBP13.04□□□□□ -0.32
C9orf47-203ENST00000375851 INHBCP55103 352 aa13.04□□□□□ -0.32
C9orf47-203ENST00000375851 RPS15AP62244 130 aaKnown RBP13.04□□□□□ -0.32
C9orf47-203ENST00000375851 RPL6Q02878 288 aaKnown RBP13.04□□□□□ -0.32
C9orf47-203ENST00000375851 RPA4Q13156 261 aa13.04□□□□□ -0.32
C9orf47-203ENST00000375851 NIPAL1Q6NVV3 410 aa13.04□□□□□ -0.32
C9orf47-203ENST00000375851 LIPIQ6XZB0 460 aa13.04□□□□□ -0.32
C9orf47-203ENST00000375851 LRRC25Q8N386 305 aaPredicted RBP13.04□□□□□ -0.32
C9orf47-203ENST00000375851 C16orf78Q8WTQ4 265 aa13.04□□□□□ -0.32
C9orf47-203ENST00000375851 ATOH8Q96SQ7 321 aa13.04□□□□□ -0.32
C9orf47-203ENST00000375851 ZNF334Q9HCZ1 680 aaPredicted RBP13.04□□□□□ -0.32
C9orf47-203ENST00000375851 COL18A1P39060 1754 aa13.04□□□□□ -0.32
C9orf47-203ENST00000375851 FAAHO00519 579 aa13.04□□□□□ -0.32
C9orf47-203ENST00000375851 RAB36O95755 333 aa13.04□□□□□ -0.32
C9orf47-203ENST00000375851 DBIP07108 87 aaKnown RBP13.04□□□□□ -0.32
C9orf47-203ENST00000375851 HLA-FP30511 346 aa13.04□□□□□ -0.32
C9orf47-203ENST00000375851 TPTEP56180 551 aa13.04□□□□□ -0.32
C9orf47-203ENST00000375851 PIGFQ07326 219 aa13.04□□□□□ -0.32
C9orf47-203ENST00000375851 NPRL3Q12980 569 aa13.04□□□□□ -0.32
C9orf47-203ENST00000375851 SGCBQ16585 318 aa13.04□□□□□ -0.32
C9orf47-203ENST00000375851 MEDAGQ5VYS4 303 aa13.04□□□□□ -0.32
C9orf47-203ENST00000375851 DNM1P34Q6PK57 102 aa13.04□□□□□ -0.32
C9orf47-203ENST00000375851 GNPDA2Q8TDQ7 276 aa13.04□□□□□ -0.32
C9orf47-203ENST00000375851 DOK4Q8TEW6 326 aa13.04□□□□□ -0.32
C9orf47-203ENST00000375851 FATE1Q969F0 183 aa13.04□□□□□ -0.32
C9orf47-203ENST00000375851 SEC61A2Q9H9S3 476 aa13.04□□□□□ -0.32
C9orf47-203ENST00000375851 PDE7BQ9NP56 450 aa13.04□□□□□ -0.32
C9orf47-203ENST00000375851 C14orf105Q9NVL8 296 aa13.04□□□□□ -0.32
C9orf47-203ENST00000375851 SMOXQ9NWM0 555 aa13.04□□□□□ -0.32
C9orf47-203ENST00000375851 A0A1W2PRQ8 180 aa13.04□□□□□ -0.32
C9orf47-203ENST00000375851 SOCS2O14508 198 aa13.04□□□□□ -0.32
C9orf47-203ENST00000375851 VILLO15195 856 aa13.04□□□□□ -0.32
C9orf47-203ENST00000375851 SORBS2O94875 1100 aaKnown RBP13.04□□□□□ -0.32
C9orf47-203ENST00000375851 ARHGEF15O94989 841 aa13.04□□□□□ -0.32
C9orf47-203ENST00000375851 RNH1P13489 461 aaKnown RBP13.04□□□□□ -0.32
C9orf47-203ENST00000375851 ADRA1AP35348 466 aa13.04□□□□□ -0.32
C9orf47-203ENST00000375851 IST1P53990 364 aa13.04□□□□□ -0.32
C9orf47-203ENST00000375851 VBP1P61758 197 aa13.04□□□□□ -0.32
C9orf47-203ENST00000375851 ADAM8P78325 824 aa13.04□□□□□ -0.32
C9orf47-203ENST00000375851 DSG2Q14126 1118 aa13.04□□□□□ -0.32
C9orf47-203ENST00000375851 RCAN2Q14206 197 aa13.04□□□□□ -0.32
C9orf47-203ENST00000375851 NNATQ16517 81 aa13.04□□□□□ -0.32
C9orf47-203ENST00000375851 SLC36A3Q495N2 470 aa13.04□□□□□ -0.32
C9orf47-203ENST00000375851 KCTD11Q693B1 232 aa13.04□□□□□ -0.32
C9orf47-203ENST00000375851 OR52E8Q6IFG1 317 aa13.04□□□□□ -0.32
C9orf47-203ENST00000375851 OR4N5Q8IXE1 308 aa13.04□□□□□ -0.32
C9orf47-203ENST00000375851 EURLQ9NYK6 297 aa13.04□□□□□ -0.32
C9orf47-203ENST00000375851 GDE1Q9NZC3 331 aa13.04□□□□□ -0.32
C9orf47-203ENST00000375851 PLCH1Q4KWH8 1693 aa13.03□□□□□ -0.32
C9orf47-203ENST00000375851 H0YJX3 145 aa13.03□□□□□ -0.32
C9orf47-203ENST00000375851 PSMD9O00233 223 aa13.03□□□□□ -0.32
C9orf47-203ENST00000375851 AREL1O15033 823 aa13.03□□□□□ -0.32
C9orf47-203ENST00000375851 CLPXO76031 633 aa13.03□□□□□ -0.32
C9orf47-203ENST00000375851 SIM1P81133 766 aaPredicted RBP13.03□□□□□ -0.32
C9orf47-203ENST00000375851 ZNF33BQ06732 778 aa13.03□□□□□ -0.32
C9orf47-203ENST00000375851 MSANTD1Q6ZTZ1 278 aa13.03□□□□□ -0.32
C9orf47-203ENST00000375851 LARP4Q71RC2 724 aaKnown RBP eCLIP13.03□□□□□ -0.32
C9orf47-203ENST00000375851 ZNF550Q7Z398 422 aa13.03□□□□□ -0.32
C9orf47-203ENST00000375851 YIPF7Q8N8F6 280 aa13.03□□□□□ -0.32
C9orf47-203ENST00000375851 SHKBP1Q8TBC3 707 aa13.03□□□□□ -0.32
C9orf47-203ENST00000375851 MAL2Q969L2 176 aa13.03□□□□□ -0.32
C9orf47-203ENST00000375851 BARD1Q99728 777 aaKnown RBP13.03□□□□□ -0.32
C9orf47-203ENST00000375851 ASPNQ9BXN1 380 aa13.03□□□□□ -0.32
C9orf47-203ENST00000375851 KCNK12Q9HB15 430 aa13.03□□□□□ -0.32
C9orf47-203ENST00000375851 HSFX1Q9UBD0 423 aa13.03□□□□□ -0.32
C9orf47-203ENST00000375851 PGAP2Q9UHJ9 254 aa13.03□□□□□ -0.32
C9orf47-203ENST00000375851 CSTAP01040 98 aa13.03□□□□□ -0.32
C9orf47-203ENST00000375851 RHCEP18577 417 aa13.03□□□□□ -0.32
C9orf47-203ENST00000375851 CD72P21854 359 aa13.03□□□□□ -0.32
C9orf47-203ENST00000375851 ITGB7P26010 798 aa13.03□□□□□ -0.32
C9orf47-203ENST00000375851 SLC9A3P48764 834 aa13.03□□□□□ -0.32
C9orf47-203ENST00000375851 RAB15P59190 212 aa13.03□□□□□ -0.32
C9orf47-203ENST00000375851 PITPNAQ00169 270 aa13.03□□□□□ -0.32
C9orf47-203ENST00000375851 CBLBQ13191 982 aa13.03□□□□□ -0.32
C9orf47-203ENST00000375851 ZSWIM9Q86XI8 627 aa13.03□□□□□ -0.32
C9orf47-203ENST00000375851 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.03□□□□□ -0.32
C9orf47-203ENST00000375851 OR52N2Q8NGI0 321 aa13.03□□□□□ -0.32
C9orf47-203ENST00000375851 OR51G2Q8NGK0 314 aa13.03□□□□□ -0.32
C9orf47-203ENST00000375851 OR51A7Q8NH64 312 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms