RNA–Protein interactions for RNA: ENST00000267484.9

RTN1-201, Transcript of reticulon 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RTN1, Length 3,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-201ENST00000267484 ZFP69Q49AA0 526 aa16.1■□□□□ 0.17
RTN1-201ENST00000267484 TPGS2Q68CL5 300 aa16.1■□□□□ 0.17
RTN1-201ENST00000267484 HOMEZQ8IX15 550 aa16.1■□□□□ 0.17
RTN1-201ENST00000267484 CFAP206Q8IYR0 622 aa16.1■□□□□ 0.17
RTN1-201ENST00000267484 HORMAD2Q8N7B1 307 aa16.1■□□□□ 0.17
RTN1-201ENST00000267484 ST13P5Q8NFI4 369 aaPredicted RBP16.1■□□□□ 0.17
RTN1-201ENST00000267484 GOT1L1Q8NHS2 421 aaPredicted RBP16.1■□□□□ 0.17
RTN1-201ENST00000267484 MRPS31Q92665 395 aaKnown RBP16.1■□□□□ 0.17
RTN1-201ENST00000267484 LINC00597Q9H2U6 94 aa16.1■□□□□ 0.17
RTN1-201ENST00000267484 TMEM38AQ9H6F2 299 aa16.1■□□□□ 0.17
RTN1-201ENST00000267484 CRNNQ9UBG3 495 aaPredicted RBP16.1■□□□□ 0.17
RTN1-201ENST00000267484 ANKDD1BA6NHY2 528 aa16.1■□□□□ 0.17
RTN1-201ENST00000267484 CAPN5O15484 640 aaPredicted RBP16.1■□□□□ 0.17
RTN1-201ENST00000267484 CDRT1O95170 752 aa16.1■□□□□ 0.17
RTN1-201ENST00000267484 ARAFP10398 606 aa16.1■□□□□ 0.17
RTN1-201ENST00000267484 IL7P13232 177 aa16.1■□□□□ 0.17
RTN1-201ENST00000267484 RHCEP18577 417 aa16.1■□□□□ 0.17
RTN1-201ENST00000267484 ALDH9A1P49189 494 aa16.1■□□□□ 0.17
RTN1-201ENST00000267484 DSTNP60981 165 aa16.1■□□□□ 0.17
RTN1-201ENST00000267484 HTR3DQ70Z44 454 aa16.1■□□□□ 0.17
RTN1-201ENST00000267484 GPR32P1Q8NGA4 272 aa16.1■□□□□ 0.17
RTN1-201ENST00000267484 OR4D11Q8NGI4 311 aa16.1■□□□□ 0.17
RTN1-201ENST00000267484 FYTTD1Q96QD9 318 aaKnown RBP16.1■□□□□ 0.17
RTN1-201ENST00000267484 PRRG3Q9BZD7 231 aa16.1■□□□□ 0.17
RTN1-201ENST00000267484 SLAMF7Q9NQ25 335 aa16.1■□□□□ 0.17
RTN1-201ENST00000267484 CNOT2Q9NZN8 540 aaKnown RBP16.1■□□□□ 0.17
RTN1-201ENST00000267484 REV1Q9UBZ9 1251 aa16.1■□□□□ 0.17
RTN1-201ENST00000267484 CARD8Q9Y2G2 431 aa16.1■□□□□ 0.17
RTN1-201ENST00000267484 KLHL20Q9Y2M5 609 aa16.1■□□□□ 0.17
RTN1-201ENST00000267484 LSM2Q9Y333 95 aaKnown RBP16.1■□□□□ 0.17
RTN1-201ENST00000267484 USP34Q70CQ2 3546 aa16.1■□□□□ 0.17
RTN1-201ENST00000267484 MYO7AQ13402 2215 aa16.09■□□□□ 0.17
RTN1-201ENST00000267484 HOXA2O43364 376 aa16.09■□□□□ 0.17
RTN1-201ENST00000267484 SH3BP5O60239 455 aa16.09■□□□□ 0.17
RTN1-201ENST00000267484 EIF2S1P05198 315 aaKnown RBP16.09■□□□□ 0.17
RTN1-201ENST00000267484 PTGER1P34995 402 aa16.09■□□□□ 0.17
RTN1-201ENST00000267484 TIE1P35590 1138 aa16.09■□□□□ 0.17
RTN1-201ENST00000267484 HMGA2P52926 109 aa16.09■□□□□ 0.17
RTN1-201ENST00000267484 TMEM115Q12893 351 aaPredicted RBP16.09■□□□□ 0.17
RTN1-201ENST00000267484 OR9Q1Q8NGQ5 310 aa16.09■□□□□ 0.17
RTN1-201ENST00000267484 LMLNQ96KR4 655 aa16.09■□□□□ 0.17
RTN1-201ENST00000267484 PHOX2BQ99453 314 aa16.09■□□□□ 0.17
RTN1-201ENST00000267484 CCDC32Q9BV29 185 aa16.09■□□□□ 0.17
RTN1-201ENST00000267484 ABCB9Q9NP78 766 aa16.09■□□□□ 0.17
RTN1-201ENST00000267484 MIEF1Q9NQG6 463 aa16.09■□□□□ 0.17
RTN1-201ENST00000267484 TVP23BQ9NYZ1 205 aa16.09■□□□□ 0.17
RTN1-201ENST00000267484 TAAR2Q9P1P5 351 aa16.09■□□□□ 0.17
RTN1-201ENST00000267484 SLC25A13Q9UJS0 675 aa16.09■□□□□ 0.17
RTN1-201ENST00000267484 ANGPT4Q9Y264 503 aa16.09■□□□□ 0.17
RTN1-201ENST00000267484 DNMT3AQ9Y6K1 912 aaPredicted RBP16.09■□□□□ 0.17
RTN1-201ENST00000267484 PTX3P26022 381 aaPredicted RBP16.09■□□□□ 0.17
RTN1-201ENST00000267484 CAV3P56539 151 aa16.09■□□□□ 0.17
RTN1-201ENST00000267484 ZNF91Q05481 1191 aa16.09■□□□□ 0.17
RTN1-201ENST00000267484 RBBP4Q09028 425 aa16.09■□□□□ 0.17
RTN1-201ENST00000267484 ZNF630Q2M218 657 aaPredicted RBP16.09■□□□□ 0.17
RTN1-201ENST00000267484 FAM71E1Q6IPT2 247 aa16.09■□□□□ 0.17
RTN1-201ENST00000267484 SLC38A5Q8WUX1 472 aa16.09■□□□□ 0.17
RTN1-201ENST00000267484 TMEM169Q96HH4 297 aa16.09■□□□□ 0.17
RTN1-201ENST00000267484 SLC25A19Q9HC21 320 aa16.09■□□□□ 0.17
RTN1-201ENST00000267484 SLC5A10A0PJK1 596 aa16.09■□□□□ 0.17
RTN1-201ENST00000267484 ZNF197O14709 1029 aa16.09■□□□□ 0.17
RTN1-201ENST00000267484 ATG13O75143 517 aa16.09■□□□□ 0.17
RTN1-201ENST00000267484 PTPN2P17706 415 aa16.09■□□□□ 0.17
RTN1-201ENST00000267484 CXCR2P25025 360 aa16.09■□□□□ 0.17
RTN1-201ENST00000267484 GRIN2CQ14957 1233 aa16.09■□□□□ 0.17
RTN1-201ENST00000267484 FAM131AQ6UXB0 335 aa16.09■□□□□ 0.17
RTN1-201ENST00000267484 SZRD1Q7Z422 152 aa16.09■□□□□ 0.17
RTN1-201ENST00000267484 ABI3BPQ7Z7G0 1075 aa16.09■□□□□ 0.17
RTN1-201ENST00000267484 RAB43Q86YS6 212 aa16.09■□□□□ 0.17
RTN1-201ENST00000267484 TRIM48Q8IWZ4 208 aa16.09■□□□□ 0.17
RTN1-201ENST00000267484 SLC43A3Q8NBI5 491 aa16.09■□□□□ 0.17
RTN1-201ENST00000267484 LILRB4Q8NHJ6 448 aa16.09■□□□□ 0.17
RTN1-201ENST00000267484 TSSK6Q9BXA6 273 aa16.09■□□□□ 0.17
RTN1-201ENST00000267484 CPEB1Q9BZB8 566 aaKnown RBP16.09■□□□□ 0.17
RTN1-201ENST00000267484 UCK2Q9BZX2 261 aa16.09■□□□□ 0.17
RTN1-201ENST00000267484 PAQR5Q9NXK6 330 aaPredicted RBP16.09■□□□□ 0.17
RTN1-201ENST00000267484 TBC1D14Q9P2M4 693 aa16.09■□□□□ 0.17
RTN1-201ENST00000267484 NUFIP1Q9UHK0 495 aaKnown RBP16.09■□□□□ 0.17
RTN1-201ENST00000267484 MEIOCA2RUB1 952 aa16.08■□□□□ 0.16
RTN1-201ENST00000267484 SH3D21A4FU49 640 aa16.08■□□□□ 0.16
RTN1-201ENST00000267484 PSMA1P25786 263 aaKnown RBP16.08■□□□□ 0.16
RTN1-201ENST00000267484 HOXC5Q00444 222 aa16.08■□□□□ 0.16
RTN1-201ENST00000267484 COL9A2Q14055 689 aaPredicted RBP16.08■□□□□ 0.16
RTN1-201ENST00000267484 HENMT1Q5T8I9 393 aaKnown RBP16.08■□□□□ 0.16
RTN1-201ENST00000267484 C22orf42Q6IC83 251 aa16.08■□□□□ 0.16
RTN1-201ENST00000267484 SYT14Q8NB59 555 aa16.08■□□□□ 0.16
RTN1-201ENST00000267484 BTN2A2Q8WVV5 523 aa16.08■□□□□ 0.16
RTN1-201ENST00000267484 MVB12BQ9H7P6 319 aa16.08■□□□□ 0.16
RTN1-201ENST00000267484 A0A075B6Q4 140 aa16.08■□□□□ 0.16
RTN1-201ENST00000267484 RGS13O14921 159 aa16.08■□□□□ 0.16
RTN1-201ENST00000267484 TEX28O15482 410 aa16.08■□□□□ 0.16
RTN1-201ENST00000267484 TLX2O43763 284 aaPredicted RBP16.08■□□□□ 0.16
RTN1-201ENST00000267484 AP2A2O94973 939 aa16.08■□□□□ 0.16
RTN1-201ENST00000267484 C1orf105O95561 183 aa16.08■□□□□ 0.16
RTN1-201ENST00000267484 PCSK2P16519 638 aa16.08■□□□□ 0.16
RTN1-201ENST00000267484 VIPR1P32241 457 aa16.08■□□□□ 0.16
RTN1-201ENST00000267484 CSTF2P33240 577 aaKnown RBP eCLIP16.08■□□□□ 0.16
RTN1-201ENST00000267484 RORCP51449 518 aa16.08■□□□□ 0.16
RTN1-201ENST00000267484 ZNF33BQ06732 778 aa16.08■□□□□ 0.16
RTN1-201ENST00000267484 HSPB3Q12988 150 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms