RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 ThP24529 498 aa15.54■□□□□ 0.08
Trim28-201ENSMUST00000005705 Ido1P28776 407 aaKnown RBP15.54■□□□□ 0.08
Trim28-201ENSMUST00000005705 Sox6P40645 827 aa15.54■□□□□ 0.08
Trim28-201ENSMUST00000005705 Espl1P60330 2118 aa15.54■□□□□ 0.08
Trim28-201ENSMUST00000005705 Rab8bP61028 207 aa15.54■□□□□ 0.08
Trim28-201ENSMUST00000005705 Sec1P97353 368 aa15.54■□□□□ 0.08
Trim28-201ENSMUST00000005705 Dnajc11Q5U458 559 aa15.54■□□□□ 0.08
Trim28-201ENSMUST00000005705 St7lQ8K4P7 559 aa15.54■□□□□ 0.08
Trim28-201ENSMUST00000005705 Olfr535Q8VGL3 312 aa15.54■□□□□ 0.08
Trim28-201ENSMUST00000005705 Olfr622Q8VGY7 317 aa15.54■□□□□ 0.08
Trim28-201ENSMUST00000005705 Isoc2bQ9DCC7 210 aa15.54■□□□□ 0.08
Trim28-201ENSMUST00000005705 Nectin3Q9JLB9 549 aa15.54■□□□□ 0.08
Trim28-201ENSMUST00000005705 PrknQ9WVS6 464 aa15.54■□□□□ 0.08
Trim28-201ENSMUST00000005705 Gm17190V9GX38 357 aa15.54■□□□□ 0.08
Trim28-201ENSMUST00000005705 Arid1aA2BH40 2283 aaKnown RBP15.53■□□□□ 0.08
Trim28-201ENSMUST00000005705 Gm14295A2BG91 834 aa15.53■□□□□ 0.08
Trim28-201ENSMUST00000005705 Zfp808B8JJZ4 753 aa15.53■□□□□ 0.08
Trim28-201ENSMUST00000005705 Gm17555F6U8B9 371 aa15.53■□□□□ 0.08
Trim28-201ENSMUST00000005705 Vmn2r12L7N217 831 aa15.53■□□□□ 0.08
Trim28-201ENSMUST00000005705 Gpr25P0C5I1 358 aa15.53■□□□□ 0.08
Trim28-201ENSMUST00000005705 Ccdc85bQ6PDY0 202 aa15.53■□□□□ 0.08
Trim28-201ENSMUST00000005705 Olfr1307Q7TQX1 312 aa15.53■□□□□ 0.08
Trim28-201ENSMUST00000005705 NanogQ80Z64 305 aa15.53■□□□□ 0.08
Trim28-201ENSMUST00000005705 Palm2Q8BR92 376 aa15.53■□□□□ 0.08
Trim28-201ENSMUST00000005705 Nlgn3Q8BYM5 825 aa15.53■□□□□ 0.08
Trim28-201ENSMUST00000005705 HopxQ8R1H0 73 aa15.53■□□□□ 0.08
Trim28-201ENSMUST00000005705 Rnf130Q8VEM1 419 aa15.53■□□□□ 0.08
Trim28-201ENSMUST00000005705 Pcdhga9Q91XX9 932 aa15.53■□□□□ 0.08
Trim28-201ENSMUST00000005705 HadhbQ99JY0 475 aaKnown RBP15.53■□□□□ 0.08
Trim28-201ENSMUST00000005705 Mgme1Q9CXC3 338 aa15.53■□□□□ 0.08
Trim28-201ENSMUST00000005705 Nudt14Q9D142 222 aa15.53■□□□□ 0.08
Trim28-201ENSMUST00000005705 Aldh6a1Q9EQ20 535 aaKnown RBP15.53■□□□□ 0.08
Trim28-201ENSMUST00000005705 Panx1Q9JIP4 426 aa15.53■□□□□ 0.08
Trim28-201ENSMUST00000005705 PnckQ9QYK9 343 aa15.53■□□□□ 0.08
Trim28-201ENSMUST00000005705 Zfp40B1B1D3 796 aa15.53■□□□□ 0.08
Trim28-201ENSMUST00000005705 Gm4450E9Q007 373 aa15.53■□□□□ 0.08
Trim28-201ENSMUST00000005705 Il13ra1O09030 424 aa15.53■□□□□ 0.08
Trim28-201ENSMUST00000005705 Tulp3O88413 460 aa15.53■□□□□ 0.08
Trim28-201ENSMUST00000005705 Gon7P0C8B4 98 aa15.53■□□□□ 0.08
Trim28-201ENSMUST00000005705 Bmp7P23359 430 aa15.53■□□□□ 0.08
Trim28-201ENSMUST00000005705 Snta1Q61234 503 aa15.53■□□□□ 0.08
Trim28-201ENSMUST00000005705 Hsd3b4Q61767 373 aa15.53■□□□□ 0.08
Trim28-201ENSMUST00000005705 C1qtnf6Q6IR41 264 aa15.53■□□□□ 0.08
Trim28-201ENSMUST00000005705 Galnt12Q8BGT9 576 aa15.53■□□□□ 0.08
Trim28-201ENSMUST00000005705 Clrn3Q8BHH8 226 aa15.53■□□□□ 0.08
Trim28-201ENSMUST00000005705 Slc6a17Q8BJI1 727 aa15.53■□□□□ 0.08
Trim28-201ENSMUST00000005705 Slc25a24Q8BMD8 475 aa15.53■□□□□ 0.08
Trim28-201ENSMUST00000005705 Piwil4Q8CGT6 848 aa15.53■□□□□ 0.08
Trim28-201ENSMUST00000005705 Mcfd2Q8K5B2 145 aa15.53■□□□□ 0.08
Trim28-201ENSMUST00000005705 Kctd5Q8VC57 234 aa15.53■□□□□ 0.08
Trim28-201ENSMUST00000005705 Akr1d1Q8VCX1 325 aa15.53■□□□□ 0.08
Trim28-201ENSMUST00000005705 Adck1Q9D0L4 525 aa15.53■□□□□ 0.08
Trim28-201ENSMUST00000005705 Olfr704Q9EPF6 315 aa15.53■□□□□ 0.08
Trim28-201ENSMUST00000005705 Vps29Q9QZ88 182 aa15.53■□□□□ 0.08
Trim28-201ENSMUST00000005705 Clec2iQ9WVF9 217 aa15.53■□□□□ 0.08
Trim28-201ENSMUST00000005705 B4galt6Q9WVK5 382 aa15.53■□□□□ 0.08
Trim28-201ENSMUST00000005705 Itgb6Q9Z0T9 787 aa15.53■□□□□ 0.08
Trim28-201ENSMUST00000005705 Creb3l1Q9Z125 519 aa15.53■□□□□ 0.08
Trim28-201ENSMUST00000005705 Zfp964B2RR88 472 aa15.53■□□□□ 0.08
Trim28-201ENSMUST00000005705 Adamts3E9Q287 1204 aa15.53■□□□□ 0.08
Trim28-201ENSMUST00000005705 Catsperg1E9Q355 1151 aa15.53■□□□□ 0.08
Trim28-201ENSMUST00000005705 Vmn2r4K7N784 913 aa15.53■□□□□ 0.08
Trim28-201ENSMUST00000005705 Rem1O35929 297 aa15.53■□□□□ 0.08
Trim28-201ENSMUST00000005705 Hoxd10P28359 340 aa15.53■□□□□ 0.08
Trim28-201ENSMUST00000005705 Sult2a1P52843 285 aa15.53■□□□□ 0.08
Trim28-201ENSMUST00000005705 Myl12aQ6ZWQ9 172 aa15.53■□□□□ 0.08
Trim28-201ENSMUST00000005705 Znf322Q8BZ89 410 aa15.53■□□□□ 0.08
Trim28-201ENSMUST00000005705 Lancl3Q8CD19 420 aa15.53■□□□□ 0.08
Trim28-201ENSMUST00000005705 Elmod3Q91YP6 381 aa15.53■□□□□ 0.08
Trim28-201ENSMUST00000005705 L3hypdhQ9CXA2 354 aa15.53■□□□□ 0.08
Trim28-201ENSMUST00000005705 HaghlQ9DB32 283 aa15.53■□□□□ 0.08
Trim28-201ENSMUST00000005705 Hspb3Q9QZ57 154 aa15.53■□□□□ 0.08
Trim28-201ENSMUST00000005705 Adamts9E9PUN6 1931 aa15.52■□□□□ 0.08
Trim28-201ENSMUST00000005705 Cfap77A0A087WRI3 283 aa15.52■□□□□ 0.08
Trim28-201ENSMUST00000005705 Igkv17-121A0A0G2JFA8 117 aa15.52■□□□□ 0.08
Trim28-201ENSMUST00000005705 Pgbd5D3YZI9 523 aa15.52■□□□□ 0.08
Trim28-201ENSMUST00000005705 Galnt9G3X942 604 aa15.52■□□□□ 0.08
Trim28-201ENSMUST00000005705 Cyp2j5O54749 501 aa15.52■□□□□ 0.08
Trim28-201ENSMUST00000005705 Gh1P06880 216 aa15.52■□□□□ 0.08
Trim28-201ENSMUST00000005705 Surf2P09926 257 aaKnown RBP15.52■□□□□ 0.08
Trim28-201ENSMUST00000005705 Gas2P11862 314 aaKnown RBP15.52■□□□□ 0.08
Trim28-201ENSMUST00000005705 Ifngr2Q63953 332 aa15.52■□□□□ 0.08
Trim28-201ENSMUST00000005705 AardQ811W1 167 aa15.52■□□□□ 0.08
Trim28-201ENSMUST00000005705 PstkQ8BP74 359 aa15.52■□□□□ 0.08
Trim28-201ENSMUST00000005705 Galnt13Q8CF93 556 aa15.52■□□□□ 0.08
Trim28-201ENSMUST00000005705 Nudt6Q8CH40 313 aa15.52■□□□□ 0.08
Trim28-201ENSMUST00000005705 Olfr677Q8VF06 312 aa15.52■□□□□ 0.08
Trim28-201ENSMUST00000005705 SharpinQ91WA6 380 aa15.52■□□□□ 0.08
Trim28-201ENSMUST00000005705 Nphs2Q91X05 385 aa15.52■□□□□ 0.08
Trim28-201ENSMUST00000005705 Snx4Q91YJ2 450 aa15.52■□□□□ 0.08
Trim28-201ENSMUST00000005705 Bbox1Q924Y0 387 aa15.52■□□□□ 0.08
Trim28-201ENSMUST00000005705 Olfr701Q9D3U9 316 aa15.52■□□□□ 0.08
Trim28-201ENSMUST00000005705 PrkraQ9WTX2 313 aaKnown RBP15.52■□□□□ 0.08
Trim28-201ENSMUST00000005705 Lrrc31F6VYM1 502 aa15.52■□□□□ 0.07
Trim28-201ENSMUST00000005705 Dnajb3O35723 242 aa15.52■□□□□ 0.07
Trim28-201ENSMUST00000005705 LdhcP00342 332 aa15.52■□□□□ 0.07
Trim28-201ENSMUST00000005705 Tuba1bP05213 451 aa15.52■□□□□ 0.07
Trim28-201ENSMUST00000005705 Serpine1P22777 402 aa15.52■□□□□ 0.07
Trim28-201ENSMUST00000005705 Opn1swP51491 346 aa15.52■□□□□ 0.07
Trim28-201ENSMUST00000005705 Tuba1aP68369 451 aa15.52■□□□□ 0.07
Retrieved 100 of 22,080 RNA–protein pairs in 39.6 ms