RNA–Protein interactions for RNA: ENST00000553719.5

PSEN1-208, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-208ENST00000553719 MS4A12Q9NXJ0 267 aa17■□□□□ 0.31
PSEN1-208ENST00000553719 NOP53Q9NZM5 478 aaKnown RBP17■□□□□ 0.31
PSEN1-208ENST00000553719 CROTQ9UKG9 612 aa17■□□□□ 0.31
PSEN1-208ENST00000553719 FBXW2Q9UKT8 454 aa17■□□□□ 0.31
PSEN1-208ENST00000553719 EXO1Q9UQ84 846 aaKnown RBP17■□□□□ 0.31
PSEN1-208ENST00000553719 WBP11Q9Y2W2 641 aaKnown RBP17■□□□□ 0.31
PSEN1-208ENST00000553719 PCDHGA6Q9Y5G7 932 aa17■□□□□ 0.31
PSEN1-208ENST00000553719 A0A0G2JND7 137 aa16.99■□□□□ 0.31
PSEN1-208ENST00000553719 GNG14A0A1W2PPG7 69 aa16.99■□□□□ 0.31
PSEN1-208ENST00000553719 ARHGAP10A1A4S6 786 aa16.99■□□□□ 0.31
PSEN1-208ENST00000553719 C9J4A7 227 aa16.99■□□□□ 0.31
PSEN1-208ENST00000553719 FAM227AF5H4B4 570 aa16.99■□□□□ 0.31
PSEN1-208ENST00000553719 ANKRD28O15084 1053 aa16.99■□□□□ 0.31
PSEN1-208ENST00000553719 JRKO75564 520 aa16.99■□□□□ 0.31
PSEN1-208ENST00000553719 IL3P08700 152 aa16.99■□□□□ 0.31
PSEN1-208ENST00000553719 ZGLP1P0C6A0 271 aa16.99■□□□□ 0.31
PSEN1-208ENST00000553719 PRPS2P11908 318 aa16.99■□□□□ 0.31
PSEN1-208ENST00000553719 F8A1P23610 371 aa16.99■□□□□ 0.31
PSEN1-208ENST00000553719 MRPL19P49406 292 aaKnown RBP16.99■□□□□ 0.31
PSEN1-208ENST00000553719 FOXL2P58012 376 aa16.99■□□□□ 0.31
PSEN1-208ENST00000553719 C21orf58P58505 322 aa16.99■□□□□ 0.31
PSEN1-208ENST00000553719 TAS2R50P59544 299 aa16.99■□□□□ 0.31
PSEN1-208ENST00000553719 KLC1Q07866 573 aa16.99■□□□□ 0.31
PSEN1-208ENST00000553719 CLN3Q13286 438 aa16.99■□□□□ 0.31
PSEN1-208ENST00000553719 PTGR1Q14914 329 aa16.99■□□□□ 0.31
PSEN1-208ENST00000553719 TMEM198Q66K66 360 aa16.99■□□□□ 0.31
PSEN1-208ENST00000553719 C18orf63Q68DL7 685 aa16.99■□□□□ 0.31
PSEN1-208ENST00000553719 RIPOR1Q6ZS17 1223 aa16.99■□□□□ 0.31
PSEN1-208ENST00000553719 ACAD11Q709F0 780 aa16.99■□□□□ 0.31
PSEN1-208ENST00000553719 IKBIPQ70UQ0 350 aa16.99■□□□□ 0.31
PSEN1-208ENST00000553719 SPATA19Q7Z5L4 167 aa16.99■□□□□ 0.31
PSEN1-208ENST00000553719 MTERF4Q7Z6M4 381 aaKnown RBP16.99■□□□□ 0.31
PSEN1-208ENST00000553719 SCUBE1Q8IWY4 988 aa16.99■□□□□ 0.31
PSEN1-208ENST00000553719 LIX1Q8N485 282 aa16.99■□□□□ 0.31
PSEN1-208ENST00000553719 EFCAB3Q8N7B9 438 aa16.99■□□□□ 0.31
PSEN1-208ENST00000553719 ENDOVQ8N8Q3 282 aaKnown RBP16.99■□□□□ 0.31
PSEN1-208ENST00000553719 FAM47BQ8NA70 645 aa16.99■□□□□ 0.31
PSEN1-208ENST00000553719 FGF11Q92914 225 aa16.99■□□□□ 0.31
PSEN1-208ENST00000553719 RBCK1Q9BYM8 510 aa16.99■□□□□ 0.31
PSEN1-208ENST00000553719 BRINP2Q9C0B6 783 aa16.99■□□□□ 0.31
PSEN1-208ENST00000553719 EPN3Q9H201 632 aa16.99■□□□□ 0.31
PSEN1-208ENST00000553719 HEY2Q9UBP5 337 aa16.99■□□□□ 0.31
PSEN1-208ENST00000553719 NXT1Q9UKK6 140 aaKnown RBP16.99■□□□□ 0.31
PSEN1-208ENST00000553719 SSUH2Q9Y2M2 353 aa16.99■□□□□ 0.31
PSEN1-208ENST00000553719 CHD8Q9HCK8 2581 aa16.99■□□□□ 0.31
PSEN1-208ENST00000553719 CCDC88CQ9P219 2028 aa16.99■□□□□ 0.31
PSEN1-208ENST00000553719 DMXL2Q8TDJ6 3036 aa16.99■□□□□ 0.31
PSEN1-208ENST00000553719 SNX3O60493 162 aa16.98■□□□□ 0.31
PSEN1-208ENST00000553719 PRKRAO75569 313 aaKnown RBP16.98■□□□□ 0.31
PSEN1-208ENST00000553719 RECKO95980 971 aa16.98■□□□□ 0.31
PSEN1-208ENST00000553719 NR2F6P10588 404 aa16.98■□□□□ 0.31
PSEN1-208ENST00000553719 G6PDP11413 515 aa16.98■□□□□ 0.31
PSEN1-208ENST00000553719 TCN2P20062 427 aa16.98■□□□□ 0.31
PSEN1-208ENST00000553719 CPN2P22792 545 aa16.98■□□□□ 0.31
PSEN1-208ENST00000553719 RHAGQ02094 409 aa16.98■□□□□ 0.31
PSEN1-208ENST00000553719 DNASE1L3Q13609 305 aa16.98■□□□□ 0.31
PSEN1-208ENST00000553719 NDUFAF5Q5TEU4 345 aa16.98■□□□□ 0.31
PSEN1-208ENST00000553719 MLIPQ5VWP3 458 aa16.98■□□□□ 0.31
PSEN1-208ENST00000553719 ZNF595Q8IYB9 648 aa16.98■□□□□ 0.31
PSEN1-208ENST00000553719 MMP21Q8N119 569 aa16.98■□□□□ 0.31
PSEN1-208ENST00000553719 UCN3Q969E3 161 aa16.98■□□□□ 0.31
PSEN1-208ENST00000553719 ZNF764Q96H86 408 aaPredicted RBP16.98■□□□□ 0.31
PSEN1-208ENST00000553719 GPR87Q9BY21 358 aa16.98■□□□□ 0.31
PSEN1-208ENST00000553719 ZNF385DQ9H6B1 395 aa16.98■□□□□ 0.31
PSEN1-208ENST00000553719 BAIAP2L1Q9UHR4 511 aa16.98■□□□□ 0.31
PSEN1-208ENST00000553719 CES1P1Q9UKY3 287 aa16.98■□□□□ 0.31
PSEN1-208ENST00000553719 EIF3LQ9Y262 564 aaKnown RBP16.98■□□□□ 0.31
PSEN1-208ENST00000553719 PCDHA9Q9Y5H5 950 aa16.98■□□□□ 0.31
PSEN1-208ENST00000553719 GPR45Q9Y5Y3 372 aa16.98■□□□□ 0.31
PSEN1-208ENST00000553719 LAMA5O15230 3695 aa16.98■□□□□ 0.31
PSEN1-208ENST00000553719 IGKV3D-11A0A0A0MRZ8 115 aa16.97■□□□□ 0.31
PSEN1-208ENST00000553719 BLACEA4D250 179 aa16.97■□□□□ 0.31
PSEN1-208ENST00000553719 E9PBE3 544 aa16.97■□□□□ 0.31
PSEN1-208ENST00000553719 TGFBR3LH3BV60 316 aa16.97■□□□□ 0.31
PSEN1-208ENST00000553719 KLHL41O60662 606 aa16.97■□□□□ 0.31
PSEN1-208ENST00000553719 GUCY1B2O75343 617 aa16.97■□□□□ 0.31
PSEN1-208ENST00000553719 UMODP07911 640 aa16.97■□□□□ 0.31
PSEN1-208ENST00000553719 CYC1P08574 325 aa16.97■□□□□ 0.31
PSEN1-208ENST00000553719 CD63P08962 238 aa16.97■□□□□ 0.31
PSEN1-208ENST00000553719 DLSTP36957 453 aa16.97■□□□□ 0.31
PSEN1-208ENST00000553719 BUD31P41223 144 aaPredicted RBP16.97■□□□□ 0.31
PSEN1-208ENST00000553719 ARFIP2P53365 341 aa16.97■□□□□ 0.31
PSEN1-208ENST00000553719 OCA2Q04671 838 aa16.97■□□□□ 0.31
PSEN1-208ENST00000553719 PDE7AQ13946 482 aa16.97■□□□□ 0.31
PSEN1-208ENST00000553719 ERV3-1Q14264 604 aa16.97■□□□□ 0.31
PSEN1-208ENST00000553719 NXNQ6DKJ4 435 aa16.97■□□□□ 0.31
PSEN1-208ENST00000553719 QSOX2Q6ZRP7 698 aa16.97■□□□□ 0.31
PSEN1-208ENST00000553719 SPATA21Q7Z572 469 aa16.97■□□□□ 0.31
PSEN1-208ENST00000553719 PIGWQ7Z7B1 504 aa16.97■□□□□ 0.31
PSEN1-208ENST00000553719 LAPTM4BQ86VI4 370 aa16.97■□□□□ 0.31
PSEN1-208ENST00000553719 RIMKLAQ8IXN7 391 aa16.97■□□□□ 0.31
PSEN1-208ENST00000553719 OR2Y1Q8NGV0 311 aa16.97■□□□□ 0.31
PSEN1-208ENST00000553719 MIEF2Q96C03 454 aa16.97■□□□□ 0.31
PSEN1-208ENST00000553719 TSSK3Q96PN8 268 aa16.97■□□□□ 0.31
PSEN1-208ENST00000553719 VN1R1Q9GZP7 353 aa16.97■□□□□ 0.31
PSEN1-208ENST00000553719 NSRP1Q9H0G5 558 aaKnown RBP16.97■□□□□ 0.31
PSEN1-208ENST00000553719 CCDC86Q9H6F5 360 aaKnown RBP16.97■□□□□ 0.31
PSEN1-208ENST00000553719 EHD3Q9NZN3 535 aa16.97■□□□□ 0.31
PSEN1-208ENST00000553719 SPACA6W5XKT8 324 aa16.97■□□□□ 0.31
PSEN1-208ENST00000553719 ACACAQ13085 2346 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms