RNA–Protein interactions for RNA: ENST00000523359.1

SKP1-211, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-211ENST00000523359 PRSS56P0CW18 603 aa4.42□□□□□ -1.7
SKP1-211ENST00000523359 IGHV4-31P0DP07 118 aa4.42□□□□□ -1.7
SKP1-211ENST00000523359 KRT3P12035 628 aa4.42□□□□□ -1.7
SKP1-211ENST00000523359 ZNF3P17036 446 aa4.42□□□□□ -1.7
SKP1-211ENST00000523359 MAP2K2P36507 400 aa4.42□□□□□ -1.7
SKP1-211ENST00000523359 CDKN1AP38936 164 aa4.42□□□□□ -1.7
SKP1-211ENST00000523359 KCNJ1P48048 391 aa4.42□□□□□ -1.7
SKP1-211ENST00000523359 CLCN4P51793 760 aa4.42□□□□□ -1.7
SKP1-211ENST00000523359 CLDN15P56746 228 aa4.42□□□□□ -1.7
SKP1-211ENST00000523359 GSDMDP57764 484 aa4.42□□□□□ -1.7
SKP1-211ENST00000523359 GFPT1Q06210 699 aaPredicted RBP4.42□□□□□ -1.7
SKP1-211ENST00000523359 LCP2Q13094 533 aa4.42□□□□□ -1.7
SKP1-211ENST00000523359 HERC3Q15034 1050 aa4.42□□□□□ -1.7
SKP1-211ENST00000523359 PHKG1Q16816 387 aa4.42□□□□□ -1.7
SKP1-211ENST00000523359 KRTAP27-1Q3LI81 207 aa4.42□□□□□ -1.7
SKP1-211ENST00000523359 GTDC1Q4AE62 458 aa4.42□□□□□ -1.7
SKP1-211ENST00000523359 LACTB2Q53H82 288 aaPredicted RBP4.42□□□□□ -1.7
SKP1-211ENST00000523359 LBHQ53QV2 105 aaPredicted RBP4.42□□□□□ -1.7
SKP1-211ENST00000523359 SLC25A53Q5H9E4 307 aa4.42□□□□□ -1.7
SKP1-211ENST00000523359 C9orf50Q5SZB4 431 aa4.42□□□□□ -1.7
SKP1-211ENST00000523359 ARHGEF16Q5VV41 709 aa4.42□□□□□ -1.7
SKP1-211ENST00000523359 RAET1GQ6H3X3 334 aa4.42□□□□□ -1.7
SKP1-211ENST00000523359 PIGZQ86VD9 579 aa4.42□□□□□ -1.7
SKP1-211ENST00000523359 COMTD1Q86VU5 262 aa4.42□□□□□ -1.7
SKP1-211ENST00000523359 APLFQ8IW19 511 aaPredicted RBP4.42□□□□□ -1.7
SKP1-211ENST00000523359 CD302Q8IX05 232 aa4.42□□□□□ -1.7
SKP1-211ENST00000523359 KRT222Q8N1A0 295 aa4.42□□□□□ -1.7
SKP1-211ENST00000523359 BATF2Q8N1L9 274 aa4.42□□□□□ -1.7
SKP1-211ENST00000523359 RYBPQ8N488 228 aaPredicted RBP4.42□□□□□ -1.7
SKP1-211ENST00000523359 BHLHE23Q8NDY6 225 aa4.42□□□□□ -1.7
SKP1-211ENST00000523359 TRIM58Q8NG06 486 aa4.42□□□□□ -1.7
SKP1-211ENST00000523359 OR10Q1Q8NGQ4 319 aa4.42□□□□□ -1.7
SKP1-211ENST00000523359 LRRC45Q96CN5 670 aa4.42□□□□□ -1.7
SKP1-211ENST00000523359 NAP1L3Q99457 506 aaPredicted RBP4.42□□□□□ -1.7
SKP1-211ENST00000523359 CCT7Q99832 543 aa4.42□□□□□ -1.7
SKP1-211ENST00000523359 SH3GL1Q99961 368 aa4.42□□□□□ -1.7
SKP1-211ENST00000523359 SIKE1Q9BRV8 207 aa4.42□□□□□ -1.7
SKP1-211ENST00000523359 ZNF577Q9BSK1 485 aa4.42□□□□□ -1.7
SKP1-211ENST00000523359 INPP5KQ9BT40 448 aa4.42□□□□□ -1.7
SKP1-211ENST00000523359 OR2B2Q9GZK3 357 aa4.42□□□□□ -1.7
SKP1-211ENST00000523359 TLE6Q9H808 572 aa4.42□□□□□ -1.7
SKP1-211ENST00000523359 PALMDQ9NP74 551 aa4.42□□□□□ -1.7
SKP1-211ENST00000523359 INTS9Q9NV88 658 aaKnown RBP4.42□□□□□ -1.7
SKP1-211ENST00000523359 BARHL2Q9NY43 387 aa4.42□□□□□ -1.7
SKP1-211ENST00000523359 TXNDC16Q9P2K2 825 aa4.42□□□□□ -1.7
SKP1-211ENST00000523359 BAIAP2L1Q9UHR4 511 aa4.42□□□□□ -1.7
SKP1-211ENST00000523359 ATP6V1HQ9UI12 483 aa4.42□□□□□ -1.7
SKP1-211ENST00000523359 GMEB2Q9UKD1 530 aa4.42□□□□□ -1.7
SKP1-211ENST00000523359 TSPAN16Q9UKR8 245 aa4.42□□□□□ -1.7
SKP1-211ENST00000523359 SNX7Q9UNH6 387 aa4.42□□□□□ -1.7
SKP1-211ENST00000523359 TNNQ9UQP3 1299 aa4.42□□□□□ -1.7
SKP1-211ENST00000523359 C15orf41Q9Y2V0 281 aa4.42□□□□□ -1.7
SKP1-211ENST00000523359 ACEP12821 1306 aa4.42□□□□□ -1.7
SKP1-211ENST00000523359 C15orf38-AP3S2A0A0A6YYH1 394 aa4.41□□□□□ -1.7
SKP1-211ENST00000523359 FAM47DPA6NHR8 397 aa4.41□□□□□ -1.7
SKP1-211ENST00000523359 YKT6O15498 198 aa4.41□□□□□ -1.7
SKP1-211ENST00000523359 SSX5O60225 188 aa4.41□□□□□ -1.7
SKP1-211ENST00000523359 RPS6KA5O75582 802 aa4.41□□□□□ -1.7
SKP1-211ENST00000523359 TRMUO75648 421 aaKnown RBP4.41□□□□□ -1.7
SKP1-211ENST00000523359 FLOT1O75955 427 aa4.41□□□□□ -1.7
SKP1-211ENST00000523359 MFN2O95140 757 aa4.41□□□□□ -1.7
SKP1-211ENST00000523359 SMC2O95347 1197 aa4.41□□□□□ -1.7
SKP1-211ENST00000523359 NADKO95544 446 aaPredicted RBP4.41□□□□□ -1.7
SKP1-211ENST00000523359 CXCL14O95715 111 aa4.41□□□□□ -1.7
SKP1-211ENST00000523359 CLPTM1O96005 669 aa4.41□□□□□ -1.7
SKP1-211ENST00000523359 IGKV3-20P01619 116 aa4.41□□□□□ -1.7
SKP1-211ENST00000523359 AMBPP02760 352 aa4.41□□□□□ -1.7
SKP1-211ENST00000523359 CXCL10P02778 98 aa4.41□□□□□ -1.7
SKP1-211ENST00000523359 EDN1P05305 212 aa4.41□□□□□ -1.7
SKP1-211ENST00000523359 STAG3L3P0CL85 134 aa4.41□□□□□ -1.7
SKP1-211ENST00000523359 TROVE2P10155 538 aaKnown RBP eCLIP4.41□□□□□ -1.7
SKP1-211ENST00000523359 DARSP14868 501 aaKnown RBP4.41□□□□□ -1.7
SKP1-211ENST00000523359 CHRNB4P30926 498 aa4.41□□□□□ -1.7
SKP1-211ENST00000523359 CSTF2P33240 577 aaKnown RBP eCLIP4.41□□□□□ -1.7
SKP1-211ENST00000523359 NF2P35240 595 aa4.41□□□□□ -1.7
SKP1-211ENST00000523359 LONP1P36776 959 aaKnown RBP4.41□□□□□ -1.7
SKP1-211ENST00000523359 HSD17B3P37058 310 aa4.41□□□□□ -1.7
SKP1-211ENST00000523359 PLTPP55058 493 aa4.41□□□□□ -1.7
SKP1-211ENST00000523359 ACTR3P61158 418 aa4.41□□□□□ -1.7
SKP1-211ENST00000523359 CDR2Q01850 454 aa4.41□□□□□ -1.7
SKP1-211ENST00000523359 KLC1Q07866 573 aa4.41□□□□□ -1.7
SKP1-211ENST00000523359 SPP2Q13103 211 aa4.41□□□□□ -1.7
SKP1-211ENST00000523359 MAB21L1Q13394 359 aa4.41□□□□□ -1.7
SKP1-211ENST00000523359 ZMYND11Q15326 602 aa4.41□□□□□ -1.7
SKP1-211ENST00000523359 C20orf194Q5TEA3 1177 aa4.41□□□□□ -1.7
SKP1-211ENST00000523359 LIN9Q5TKA1 542 aa4.41□□□□□ -1.7
SKP1-211ENST00000523359 PRAMEF20Q5VT98 475 aa4.41□□□□□ -1.7
SKP1-211ENST00000523359 FAM53AQ6NSI3 398 aaPredicted RBP4.41□□□□□ -1.7
SKP1-211ENST00000523359 PRSS42Q7Z5A4 293 aa4.41□□□□□ -1.7
SKP1-211ENST00000523359 BIVMQ86UB2 503 aa4.41□□□□□ -1.7
SKP1-211ENST00000523359 KLHDC8BQ8IXV7 354 aa4.41□□□□□ -1.7
SKP1-211ENST00000523359 SLC7A5P1Q8MH63 180 aa4.41□□□□□ -1.7
SKP1-211ENST00000523359 UXS1Q8NBZ7 420 aa4.41□□□□□ -1.7
SKP1-211ENST00000523359 OR9A1PQ8NGU1 263 aa4.41□□□□□ -1.7
SKP1-211ENST00000523359 OR4C3Q8NH37 302 aa4.41□□□□□ -1.7
SKP1-211ENST00000523359 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.41□□□□□ -1.7
SKP1-211ENST00000523359 HPSE2Q8WWQ2 592 aa4.41□□□□□ -1.7
SKP1-211ENST00000523359 NCLNQ969V3 563 aa4.41□□□□□ -1.7
SKP1-211ENST00000523359 LRRC39Q96DD0 335 aa4.41□□□□□ -1.7
SKP1-211ENST00000523359 MSANTD3Q96H12 275 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms