RNA–Protein interactions for RNA: ENST00000463407.5

NUP58-206, Transcript of nucleoporin 58, humanhuman

TSL 1 (best) BASIC

Gene NUP58, Length 6,360 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-206ENST00000463407 CYBRD1Q53TN4 286 aa12.3□□□□□ -0.44
NUP58-206ENST00000463407 RBM48Q5RL73 367 aaKnown RBP12.3□□□□□ -0.44
NUP58-206ENST00000463407 ANKRD54Q6NXT1 300 aa12.3□□□□□ -0.44
NUP58-206ENST00000463407 LINGO2Q7L985 606 aa12.3□□□□□ -0.44
NUP58-206ENST00000463407 ZNF100Q8IYN0 542 aa12.3□□□□□ -0.44
NUP58-206ENST00000463407 KRTCAP2Q8N6L1 136 aa12.3□□□□□ -0.44
NUP58-206ENST00000463407 NR4A3Q92570 626 aa12.3□□□□□ -0.44
NUP58-206ENST00000463407 PGAP3Q96FM1 320 aaPredicted RBP12.3□□□□□ -0.44
NUP58-206ENST00000463407 POLR2J2Q9GZM3 115 aaKnown RBP12.3□□□□□ -0.44
NUP58-206ENST00000463407 OR51I1Q9H343 314 aa12.3□□□□□ -0.44
NUP58-206ENST00000463407 CXorf21Q9HAI6 301 aa12.3□□□□□ -0.44
NUP58-206ENST00000463407 ADAM12O43184 909 aa12.3□□□□□ -0.44
NUP58-206ENST00000463407 NOS1APO75052 506 aaPredicted RBP12.3□□□□□ -0.44
NUP58-206ENST00000463407 DIRAS1O95057 198 aa12.3□□□□□ -0.44
NUP58-206ENST00000463407 STARP49675 285 aa12.3□□□□□ -0.44
NUP58-206ENST00000463407 SRYQ05066 204 aa12.3□□□□□ -0.44
NUP58-206ENST00000463407 CARTPTQ16568 116 aa12.3□□□□□ -0.44
NUP58-206ENST00000463407 TIGD6Q17RP2 521 aa12.3□□□□□ -0.44
NUP58-206ENST00000463407 GNPDA2Q8TDQ7 276 aa12.3□□□□□ -0.44
NUP58-206ENST00000463407 CNDP2Q96KP4 475 aaKnown RBP12.3□□□□□ -0.44
NUP58-206ENST00000463407 UHRF1Q96T88 793 aaPredicted RBP12.3□□□□□ -0.44
NUP58-206ENST00000463407 ACTR3BQ9P1U1 418 aa12.3□□□□□ -0.44
NUP58-206ENST00000463407 POU2F3Q9UKI9 436 aa12.3□□□□□ -0.44
NUP58-206ENST00000463407 SMAD6O43541 496 aaKnown RBP12.3□□□□□ -0.44
NUP58-206ENST00000463407 IL1RNP18510 177 aa12.3□□□□□ -0.44
NUP58-206ENST00000463407 FUT4P22083 530 aa12.3□□□□□ -0.44
NUP58-206ENST00000463407 ARSDP51689 593 aa12.3□□□□□ -0.44
NUP58-206ENST00000463407 AP3S2P59780 193 aa12.3□□□□□ -0.44
NUP58-206ENST00000463407 ZNF252P-AS1Q0IIN9 211 aa12.3□□□□□ -0.44
NUP58-206ENST00000463407 MRPL49Q13405 166 aaKnown RBP12.3□□□□□ -0.44
NUP58-206ENST00000463407 FANK1Q8TC84 345 aa12.3□□□□□ -0.44
NUP58-206ENST00000463407 DUSP23Q9BVJ7 150 aa12.3□□□□□ -0.44
NUP58-206ENST00000463407 HCN4Q9Y3Q4 1203 aa12.3□□□□□ -0.44
NUP58-206ENST00000463407 C5orf22Q49AR2 442 aa12.29□□□□□ -0.44
NUP58-206ENST00000463407 OR52E8Q6IFG1 317 aa12.29□□□□□ -0.44
NUP58-206ENST00000463407 OGFOD2Q6N063 350 aa12.29□□□□□ -0.44
NUP58-206ENST00000463407 POLDIP3Q9BY77 421 aaKnown RBP12.29□□□□□ -0.44
NUP58-206ENST00000463407 RNF38Q9H0F5 515 aa12.29□□□□□ -0.44
NUP58-206ENST00000463407 KAT8Q9H7Z6 458 aaKnown RBP12.29□□□□□ -0.44
NUP58-206ENST00000463407 SNTG1Q9NSN8 517 aa12.29□□□□□ -0.44
NUP58-206ENST00000463407 FAM240BA0A1B0GVZ2 78 aa12.29□□□□□ -0.44
NUP58-206ENST00000463407 J3QLW9 94 aa12.29□□□□□ -0.44
NUP58-206ENST00000463407 ALDOAP04075 364 aaKnown RBP12.29□□□□□ -0.44
NUP58-206ENST00000463407 ZNF19P17023 458 aa12.29□□□□□ -0.44
NUP58-206ENST00000463407 ATF6P18850 670 aa12.29□□□□□ -0.44
NUP58-206ENST00000463407 AFF1P51825 1210 aaKnown RBP12.29□□□□□ -0.44
NUP58-206ENST00000463407 ODF4Q2M2E3 257 aa12.29□□□□□ -0.44
NUP58-206ENST00000463407 DIO2Q92813 273 aa12.29□□□□□ -0.44
NUP58-206ENST00000463407 C1orf21Q9H246 121 aa12.29□□□□□ -0.44
NUP58-206ENST00000463407 GNG8Q9UK08 70 aa12.29□□□□□ -0.44
NUP58-206ENST00000463407 DPP6P42658 865 aa12.29□□□□□ -0.44
NUP58-206ENST00000463407 ZNF84P51523 738 aa12.29□□□□□ -0.44
NUP58-206ENST00000463407 IRF4Q15306 451 aa12.29□□□□□ -0.44
NUP58-206ENST00000463407 TPRG1LQ5T0D9 272 aa12.29□□□□□ -0.44
NUP58-206ENST00000463407 DPPA4Q7L190 304 aa12.29□□□□□ -0.44
NUP58-206ENST00000463407 OR56A3Q8NH54 315 aa12.29□□□□□ -0.44
NUP58-206ENST00000463407 TSSK6Q9BXA6 273 aa12.29□□□□□ -0.44
NUP58-206ENST00000463407 CST11Q9H112 138 aa12.29□□□□□ -0.44
NUP58-206ENST00000463407 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.29□□□□□ -0.44
NUP58-206ENST00000463407 SLC35E2BP0CK96 405 aa12.29□□□□□ -0.44
NUP58-206ENST00000463407 PGAM2P15259 253 aa12.29□□□□□ -0.44
NUP58-206ENST00000463407 CKMT2P17540 419 aa12.29□□□□□ -0.44
NUP58-206ENST00000463407 HK1P19367 917 aa12.29□□□□□ -0.44
NUP58-206ENST00000463407 PGGT1BP53609 377 aa12.29□□□□□ -0.44
NUP58-206ENST00000463407 CBX3Q13185 183 aa12.29□□□□□ -0.44
NUP58-206ENST00000463407 E2F2Q14209 437 aa12.29□□□□□ -0.44
NUP58-206ENST00000463407 UNC50Q53HI1 259 aa12.29□□□□□ -0.44
NUP58-206ENST00000463407 TMEFF1Q8IYR6 380 aa12.29□□□□□ -0.44
NUP58-206ENST00000463407 TDHQ8IZJ6 230 aa12.29□□□□□ -0.44
NUP58-206ENST00000463407 FAM86B1Q8N7N1 296 aa12.29□□□□□ -0.44
NUP58-206ENST00000463407 OR4C15Q8NGM1 316 aa12.29□□□□□ -0.44
NUP58-206ENST00000463407 HUS1BQ8NHY5 278 aa12.29□□□□□ -0.44
NUP58-206ENST00000463407 HSPBAP1Q96EW2 488 aa12.29□□□□□ -0.44
NUP58-206ENST00000463407 ZNF317Q96PQ6 595 aaPredicted RBP12.29□□□□□ -0.44
NUP58-206ENST00000463407 TMEM5Q9Y2B1 443 aa12.29□□□□□ -0.44
NUP58-206ENST00000463407 RTCAO00442 366 aaKnown RBP12.29□□□□□ -0.44
NUP58-206ENST00000463407 EDN1P05305 212 aa12.29□□□□□ -0.44
NUP58-206ENST00000463407 NUDT1P36639 197 aa12.29□□□□□ -0.44
NUP58-206ENST00000463407 RPA4Q13156 261 aa12.29□□□□□ -0.44
NUP58-206ENST00000463407 TRAM2Q15035 370 aa12.29□□□□□ -0.44
NUP58-206ENST00000463407 TANGO2Q6ICL3 276 aa12.29□□□□□ -0.44
NUP58-206ENST00000463407 ZNF101Q8IZC7 436 aa12.29□□□□□ -0.44
NUP58-206ENST00000463407 OR5AR1Q8NGP9 310 aa12.29□□□□□ -0.44
NUP58-206ENST00000463407 NAA11Q9BSU3 229 aaPredicted RBP12.29□□□□□ -0.44
NUP58-206ENST00000463407 AMBNQ9NP70 447 aa12.29□□□□□ -0.44
NUP58-206ENST00000463407 GPRC5BQ9NZH0 403 aa12.29□□□□□ -0.44
NUP58-206ENST00000463407 A0A0U1RQS6 177 aa12.28□□□□□ -0.44
NUP58-206ENST00000463407 LOC100130705A0A1B0GUX0 176 aa12.28□□□□□ -0.44
NUP58-206ENST00000463407 TYROBPO43914 113 aa12.28□□□□□ -0.44
NUP58-206ENST00000463407 ITGA5P08648 1049 aa12.28□□□□□ -0.44
NUP58-206ENST00000463407 RORCP51449 518 aa12.28□□□□□ -0.44
NUP58-206ENST00000463407 MRPS21P82921 87 aaKnown RBP12.28□□□□□ -0.44
NUP58-206ENST00000463407 OR4D1Q15615 310 aa12.28□□□□□ -0.44
NUP58-206ENST00000463407 NPTX1Q15818 432 aa12.28□□□□□ -0.44
NUP58-206ENST00000463407 SGCAQ16586 387 aa12.28□□□□□ -0.44
NUP58-206ENST00000463407 C6orf136Q5SQH8 315 aa12.28□□□□□ -0.44
NUP58-206ENST00000463407 MANEALQ5VSG8 457 aa12.28□□□□□ -0.44
NUP58-206ENST00000463407 ABHD17BQ5VST6 288 aa12.28□□□□□ -0.44
NUP58-206ENST00000463407 EGFLAMQ63HQ2 1017 aa12.28□□□□□ -0.44
NUP58-206ENST00000463407 CDH24Q86UP0 819 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms